RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 RFX6Q8HWS3 928 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 USP6NLQ92738 828 aa17.76■□□□□ 0.43
FDPS-212ENST00000487002 TRIP11Q15643 1979 aa17.75■□□□□ 0.43
FDPS-212ENST00000487002 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.75■□□□□ 0.43
FDPS-212ENST00000487002 CCT8L1PA6NM43 557 aa17.75■□□□□ 0.43
FDPS-212ENST00000487002 BTBD19C9JJ37 291 aa17.75■□□□□ 0.43
FDPS-212ENST00000487002 OAS1P00973 400 aaKnown RBP17.75■□□□□ 0.43
FDPS-212ENST00000487002 TSHRP16473 764 aa17.75■□□□□ 0.43
FDPS-212ENST00000487002 GCAP28676 217 aa17.75■□□□□ 0.43
FDPS-212ENST00000487002 CTCFP49711 727 aaPredicted RBP17.75■□□□□ 0.43
FDPS-212ENST00000487002 ARL4CP56559 192 aa17.75■□□□□ 0.43
FDPS-212ENST00000487002 FAM47CQ5HY64 1035 aa17.75■□□□□ 0.43
FDPS-212ENST00000487002 TRABD2AQ86V40 505 aa17.75■□□□□ 0.43
FDPS-212ENST00000487002 VSIG1Q86XK7 387 aa17.75■□□□□ 0.43
FDPS-212ENST00000487002 SRRM1Q8IYB3 904 aaKnown RBP17.75■□□□□ 0.43
FDPS-212ENST00000487002 ZBED8Q8IZ13 594 aa17.75■□□□□ 0.43
FDPS-212ENST00000487002 TMEM130Q8N3G9 435 aa17.75■□□□□ 0.43
FDPS-212ENST00000487002 NAT8LQ8N9F0 302 aa17.75■□□□□ 0.43
FDPS-212ENST00000487002 KAT2BQ92831 832 aa17.75■□□□□ 0.43
FDPS-212ENST00000487002 MAML3Q96JK9 1138 aa17.75■□□□□ 0.43
FDPS-212ENST00000487002 NCAPGQ9BPX3 1015 aa17.75■□□□□ 0.43
FDPS-212ENST00000487002 ABHD16BQ9H3Z7 469 aa17.75■□□□□ 0.43
FDPS-212ENST00000487002 GBA2Q9HCG7 927 aaPredicted RBP17.75■□□□□ 0.43
FDPS-212ENST00000487002 TBK1Q9UHD2 729 aa17.75■□□□□ 0.43
FDPS-212ENST00000487002 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.75■□□□□ 0.43
FDPS-212ENST00000487002 CCL15-CCL14A0A0B4J2E2 113 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 IQCA1LA6NCM1 817 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 RASA4BC9J798 803 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 E7ESA3 106 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 RASA4O43374 803 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 SNX3O60493 162 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 CD48P09326 243 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 SMPD1P17405 629 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 CYP3A5P20815 502 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 PHBP35232 272 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 SNX16P57768 344 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 PDIA2Q13087 525 aaKnown RBP17.74■□□□□ 0.43
FDPS-212ENST00000487002 TFDP2Q14188 446 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 TMED2Q15363 201 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 CCL15Q16663 113 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 FAM183BPQ6ZVS7 135 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 GPR142Q7Z601 462 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 LRRC52Q8N7C0 313 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 OR6J1Q8NGC5 347 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 UBA3Q8TBC4 463 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 MGARPQ8TDB4 240 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 CPT1BQ92523 772 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 SNX27Q96L92 541 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 MAGEB18Q96M61 343 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 PCSK1NQ9UHG2 260 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.74■□□□□ 0.43
FDPS-212ENST00000487002 FAM47DPA6NHR8 397 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 E5RJQ4 531 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 GSTA1P08263 222 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 GDF10P55107 478 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 EIF3EP60228 445 aaKnown RBP17.74■□□□□ 0.43
FDPS-212ENST00000487002 FASTKD3Q14CZ7 662 aaKnown RBP17.74■□□□□ 0.43
FDPS-212ENST00000487002 LRRC14Q15048 493 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 GOLGA7BQ2TAP0 167 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 IQSEC1Q6DN90 963 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 SLC27A1Q6PCB7 646 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 CYP4V2Q6ZWL3 525 aaPredicted RBP17.74■□□□□ 0.43
FDPS-212ENST00000487002 DPP9Q86TI2 863 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 ANKRD42Q8N9B4 389 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 ATP11CQ8NB49 1132 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 HSPH1Q92598 858 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 PEBP4Q96S96 227 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 PLCD4Q9BRC7 762 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 ADAMTS10Q9H324 1103 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 VPS37BQ9H9H4 285 aa17.74■□□□□ 0.43
FDPS-212ENST00000487002 SCN1AP35498 2009 aa17.73■□□□□ 0.43
FDPS-212ENST00000487002 TCP11X1B4DZS4 312 aa17.73■□□□□ 0.43
FDPS-212ENST00000487002 PRPF4O43172 522 aaKnown RBP eCLIP17.73■□□□□ 0.431e-8■□□□□ 9.7
FDPS-212ENST00000487002 PFKMP08237 780 aa17.73■□□□□ 0.43
FDPS-212ENST00000487002 STIP1P31948 543 aaKnown RBP17.73■□□□□ 0.43
FDPS-212ENST00000487002 STX2P32856 288 aa17.73■□□□□ 0.43
FDPS-212ENST00000487002 RPL22P35268 128 aaKnown RBP17.73■□□□□ 0.43
FDPS-212ENST00000487002 IRF5Q13568 498 aa17.73■□□□□ 0.43
FDPS-212ENST00000487002 MPP2Q14168 576 aa17.73■□□□□ 0.43
FDPS-212ENST00000487002 PDK2Q15119 407 aa17.73■□□□□ 0.43
FDPS-212ENST00000487002 NOMO1Q15155 1222 aa17.73■□□□□ 0.43
FDPS-212ENST00000487002 PKDCCQ504Y2 493 aa17.73■□□□□ 0.43
FDPS-212ENST00000487002 EFHC2Q5JST6 749 aa17.73■□□□□ 0.43
FDPS-212ENST00000487002 OR6B2Q6IFH4 312 aa17.73■□□□□ 0.43
FDPS-212ENST00000487002 PNMA8AQ86V59 439 aaPredicted RBP17.73■□□□□ 0.43
FDPS-212ENST00000487002 ZDHHC17Q8IUH5 632 aa17.73■□□□□ 0.43
FDPS-212ENST00000487002 TEKT4Q8WW24 435 aa17.73■□□□□ 0.43
FDPS-212ENST00000487002 RXFP2Q8WXD0 754 aa17.73■□□□□ 0.43
FDPS-212ENST00000487002 TBCBQ99426 244 aa17.73■□□□□ 0.43
FDPS-212ENST00000487002 ELAC2Q9BQ52 826 aaKnown RBP17.73■□□□□ 0.43
FDPS-212ENST00000487002 TINF2Q9BSI4 451 aa17.73■□□□□ 0.43
FDPS-212ENST00000487002 CALN1Q9BXU9 219 aa17.73■□□□□ 0.43
FDPS-212ENST00000487002 GCOM2Q9BZD3 368 aaPredicted RBP17.73■□□□□ 0.43
FDPS-212ENST00000487002 PSMC3IPQ9P2W1 217 aaPredicted RBP17.73■□□□□ 0.43
FDPS-212ENST00000487002 SAE1Q9UBE0 346 aaPredicted RBP17.73■□□□□ 0.43
FDPS-212ENST00000487002 SMG5Q9UPR3 1016 aaKnown RBP17.73■□□□□ 0.43
FDPS-212ENST00000487002 PRPSAP2O60256 369 aa17.72■□□□□ 0.43
FDPS-212ENST00000487002 NPTXRO95502 500 aa17.72■□□□□ 0.43
FDPS-212ENST00000487002 PDGFRAP16234 1089 aa17.72■□□□□ 0.43
FDPS-212ENST00000487002 DESP17661 470 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms