RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 PNPLA4P41247 253 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 AFMP43652 599 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 MAPK8P45983 427 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 TFAMQ00059 246 aaKnown RBP6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 TNK2Q07912 1038 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 CUL4BQ13620 913 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 MYBPC2Q14324 1141 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 LRRC32Q14392 662 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 SV2CQ496J9 727 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 DGKKQ5KSL6 1271 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 FSTL4Q6MZW2 842 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 RNF19BQ6ZMZ0 732 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 GRAMD1CQ8IYS0 662 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 ELMOD1Q8N336 334 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 FRMD1Q8N878 549 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 C1orf127Q8N9H9 656 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 OR2I1PQ8NGU4 316 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 ZNF507Q8TCN5 953 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 SMARCD2Q92925 531 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 CORO1BQ9BR76 489 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 SCAND2PQ9GZW5 306 aaPredicted RBP6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 BLZF1Q9H2G9 400 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 KIAA1586Q9HCI6 787 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 AGPAT3Q9NRZ7 376 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 HSPBP1Q9NZL4 362 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 ITGA11Q9UKX5 1188 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 DSEQ9UL01 958 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 HPSEQ9Y251 543 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 NUP210Q8TEM1 1887 aaPredicted RBP6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 SPTA1P02549 2419 aa6.91□□□□□ -1.3
CTDSPL-208ENST00000486978 UBR5O95071 2799 aaPredicted RBP6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 SCN1AP35498 2009 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 CCDC163A0A0D9SF12 145 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 FAM237AA0A1B0GTK4 181 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 A0A1B0GVL5 298 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 MTMR11A4FU01 709 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 OTOL1A6NHN0 477 aaPredicted RBP6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 ZNF233A6NK53 670 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 KPNA7A9QM74 516 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 J3QKU1 62 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 TULP1O00294 542 aaPredicted RBP6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 ZNF197O14709 1029 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 ATXN7O15265 892 aaPredicted RBP6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 TGFB1I1O43294 461 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 KLRC4O43908 158 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 AKAP3O75969 853 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 VNN2O95498 520 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 ITGB3P05106 788 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 MYL1P05976 194 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 TMEM191BP0C7N4 346 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 ITPKBP27987 946 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 POLR2BP30876 1174 aaKnown RBP6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 KPNA1P52294 538 aaPredicted RBP6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 MLLT6P55198 1093 aaPredicted RBP6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 SNRPFP62306 86 aaKnown RBP6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 TWF1Q12792 350 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 GPR17Q13304 367 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 PLD1Q13393 1074 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 SURF1Q15526 300 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 BMT2Q1RMZ1 405 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 STXBP5Q5T5C0 1151 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 WSCD1Q658N2 575 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 PMS2CLQ68D20 193 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 IQCEQ6IPM2 695 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 HS2ST1Q7LGA3 356 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 SLCO6A1Q86UG4 719 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 METTL23Q86XA0 190 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 CBWD2Q8IUF1 395 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 NELFCDQ8IXH7 590 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 CSGALNACT2Q8N6G5 542 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 LRRC52Q8N7C0 313 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 SCFD1Q8WVM8 642 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 EZH1Q92800 747 aaPredicted RBP6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 MARVELD3Q96A59 401 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 PAGE5Q96GU1 130 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 ANKRD36BP1Q96IX9 119 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 ZNF512Q96ME7 567 aaPredicted RBP6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 PGLYRP2Q96PD5 576 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 UBL7Q96S82 380 aaPredicted RBP6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 TMEM209Q96SK2 561 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 MTMR12Q9C0I1 747 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 PDE11AQ9HCR9 933 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 SLC39A2Q9NP94 309 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 EXOC1Q9NV70 894 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 CGNQ9P2M7 1197 aaKnown RBP6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 AGAP1Q9UPQ3 857 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 YIPF1Q9Y548 306 aa6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 GOLGA4Q13439 2230 aaKnown RBP6.9□□□□□ -1.3
CTDSPL-208ENST00000486978 TCHHQ07283 1943 aa6.89□□□□□ -1.31
CTDSPL-208ENST00000486978 PTPRQQ9UMZ3 2332 aa6.89□□□□□ -1.31
CTDSPL-208ENST00000486978 A0A1W2PQ27 194 aa6.89□□□□□ -1.31
CTDSPL-208ENST00000486978 A0A1W2PQ64 194 aa6.89□□□□□ -1.31
CTDSPL-208ENST00000486978 A0A1W2PQD8 194 aa6.89□□□□□ -1.31
CTDSPL-208ENST00000486978 CLIC2O15247 247 aa6.89□□□□□ -1.31
CTDSPL-208ENST00000486978 HUS1O60921 280 aa6.89□□□□□ -1.31
CTDSPL-208ENST00000486978 MICAL2O94851 1124 aa6.89□□□□□ -1.31
CTDSPL-208ENST00000486978 EGFP01133 1207 aa6.89□□□□□ -1.31
CTDSPL-208ENST00000486978 TNNC2P02585 160 aa6.89□□□□□ -1.31
CTDSPL-208ENST00000486978 KRT19P08727 400 aa6.89□□□□□ -1.31
CTDSPL-208ENST00000486978 CD59P13987 128 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms