RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 ODR4Q5SWX8 454 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 NXNQ6DKJ4 435 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 CCSAPQ6IQ19 270 aaPredicted RBP5.94□□□□□ -1.46
COPS3-209ENST00000486810 SLC30A9Q6PML9 568 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 FIP1L1Q6UN15 594 aaKnown RBP5.94□□□□□ -1.46
COPS3-209ENST00000486810 RHOUQ7L0Q8 258 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 BEND5Q7L4P6 421 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 CEP57L1Q8IYX8 460 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 CPA6Q8N4T0 437 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 DCLK2Q8N568 766 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 ESX1Q8N693 406 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 GSDMBQ8TAX9 411 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 IFI44Q8TCB0 444 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 ZNF75CPQ92670 426 aaPredicted RBP5.94□□□□□ -1.46
COPS3-209ENST00000486810 EPSTI1Q96J88 318 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 MRGPRX4Q96LA9 322 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 UPF3BQ9BZI7 483 aaKnown RBP5.94□□□□□ -1.46
COPS3-209ENST00000486810 BHMT2Q9H2M3 363 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 MANSC1Q9H8J5 431 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 ARGLU1Q9NWB6 273 aaPredicted RBP5.94□□□□□ -1.46
COPS3-209ENST00000486810 MOCS1Q9NZB8 636 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 FAM30AQ9NZY2 134 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 TCEAL9Q9UHQ7 104 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 GTF3C4Q9UKN8 822 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 PRELID1Q9Y255 219 aa5.94□□□□□ -1.46
COPS3-209ENST00000486810 LINC00854A0A1B0GVQ3 168 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 CCDC78A2IDD5 438 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 C19orf81C9J6K1 198 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 H0Y3Z8 333 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 M0QX08 132 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 MGEA5O60502 916 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 DIAPH2O60879 1101 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 B3GALNT1O75752 331 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 ALDH1L1O75891 902 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 MBD4O95243 580 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 PEX11BO96011 259 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 PENKP01210 267 aaPredicted RBP5.93□□□□□ -1.46
COPS3-209ENST00000486810 ATP5JP18859 108 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 CCND1P24385 295 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 SLC6A4P31645 630 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 PEX5P50542 639 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 INHBCP55103 352 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 UBXN2AP68543 259 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 CDC42EP1Q00587 391 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 COG2Q14746 738 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 SLMAPQ14BN4 828 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 INAQ16352 499 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 TRIM71Q2Q1W2 868 aaKnown RBP5.93□□□□□ -1.46
COPS3-209ENST00000486810 UAP1L1Q3KQV9 507 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 PDCD4Q53EL6 469 aaKnown RBP5.93□□□□□ -1.46
COPS3-209ENST00000486810 THOC7Q6I9Y2 204 aaKnown RBP5.93□□□□□ -1.46
COPS3-209ENST00000486810 IRGCQ6NXR0 463 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 TLDC1Q6P9B6 456 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 ZBTB46Q86UZ6 589 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 PLXDC1Q8IUK5 500 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 ZNF276Q8N554 614 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 MSANTD4Q8NCY6 345 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 NEK11Q8NG66 645 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 ZFP28Q8NHY6 868 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 EXOC6Q8TAG9 804 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.93□□□□□ -1.46
COPS3-209ENST00000486810 HDAC10Q969S8 669 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 GCC1Q96CN9 775 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 HOOK2Q96ED9 719 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 ABCG4Q9H172 646 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 MMRN2Q9H8L6 949 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 DKK2Q9UBU2 259 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 SAP30BPQ9UHR5 308 aaKnown RBP5.93□□□□□ -1.46
COPS3-209ENST00000486810 EIF2B4Q9UI10 523 aaKnown RBP5.93□□□□□ -1.46
COPS3-209ENST00000486810 CARD8Q9Y2G2 431 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 HS3ST3A1Q9Y663 406 aa5.93□□□□□ -1.46
COPS3-209ENST00000486810 SETD1BQ9UPS6 1966 aaKnown RBP5.93□□□□□ -1.46
COPS3-209ENST00000486810 ERICH2A1L162 156 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 FOXN3O00409 490 aaPredicted RBP5.92□□□□□ -1.46
COPS3-209ENST00000486810 LIN7AO14910 233 aaPredicted RBP5.92□□□□□ -1.46
COPS3-209ENST00000486810 RNF8O76064 485 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 ERLIN2O94905 339 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 ZNF202O95125 648 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 FSHBP01225 129 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 SBK3P0C264 359 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 TROVE2P10155 538 aaKnown RBP eCLIP5.92□□□□□ -1.46
COPS3-209ENST00000486810 H2AFXP16104 143 aaPredicted RBP5.92□□□□□ -1.46
COPS3-209ENST00000486810 DESP17661 470 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 KIF5BP33176 963 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 DDIT3P35638 169 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 ZNF280AP59817 542 aaPredicted RBP5.92□□□□□ -1.46
COPS3-209ENST00000486810 CTXN1P60606 82 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 ITIH3Q06033 890 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 UBXN2BQ14CS0 331 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 TTF1Q15361 905 aaPredicted RBP5.92□□□□□ -1.46
COPS3-209ENST00000486810 CCDC38Q502W7 563 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 ZNF529Q6P280 563 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 LRRC55Q6ZSA7 311 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 MIGA2Q7L4E1 593 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 UBE3BQ7Z3V4 1068 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 GDF7Q7Z4P5 450 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 ZNF804AQ7Z570 1209 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 MRGPREQ86SM8 312 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 IQCA1Q86XH1 822 aa5.92□□□□□ -1.46
COPS3-209ENST00000486810 CCDC50Q8IVM0 306 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms