RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 PRRX2Q99811 253 aa17.7■□□□□ 0.42
CCHCR1-214ENST00000486060 ELOVL4Q9GZR5 314 aa17.7■□□□□ 0.42
CCHCR1-214ENST00000486060 NIF3L1Q9GZT8 377 aa17.7■□□□□ 0.42
CCHCR1-214ENST00000486060 LTB4R2Q9NPC1 389 aa17.7■□□□□ 0.42
CCHCR1-214ENST00000486060 FAM86C1Q9NVL1 165 aa17.7■□□□□ 0.42
CCHCR1-214ENST00000486060 OBP2AQ9NY56 170 aa17.7■□□□□ 0.42
CCHCR1-214ENST00000486060 GCNT4Q9P109 453 aa17.7■□□□□ 0.42
CCHCR1-214ENST00000486060 UXTQ9UBK9 157 aaPredicted RBP17.7■□□□□ 0.42
CCHCR1-214ENST00000486060 SIT1Q9Y3P8 196 aa17.7■□□□□ 0.42
CCHCR1-214ENST00000486060 TNFRSF10BO14763 440 aa17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 TRIM66O15016 1216 aa17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 CHADO15335 359 aa17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 P4HA1P13674 534 aa17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 DDX6P26196 483 aaKnown RBP eCLIP17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 PTPN5P54829 565 aa17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 CAMK4Q16566 473 aa17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 DCAF17Q5H9S7 520 aaPredicted RBP17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 WDR44Q5JSH3 913 aa17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 UNC93AQ86WB7 457 aa17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 FBXL13Q8NEE6 735 aa17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 BPIFB1Q8TDL5 484 aa17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 NELFBQ8WX92 580 aa17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 MRPS31Q92665 395 aaKnown RBP17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 SHDQ96IW2 340 aa17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 TNIP3Q96KP6 325 aa17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 CEP295NLQ96MC4 621 aa17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 MED15Q96RN5 788 aa17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 SMOQ99835 787 aa17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 ARID3AQ99856 593 aa17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 GTPBP4Q9BZE4 634 aaKnown RBP17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 RAB20Q9NX57 234 aa17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 CTNND2Q9UQB3 1225 aa17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 COQ4Q9Y3A0 265 aa17.69■□□□□ 0.42
CCHCR1-214ENST00000486060 CILPO75339 1184 aa17.68■□□□□ 0.42
CCHCR1-214ENST00000486060 SOX9P48436 509 aa17.68■□□□□ 0.42
CCHCR1-214ENST00000486060 STX17P56962 302 aa17.68■□□□□ 0.42
CCHCR1-214ENST00000486060 ZXDBP98169 803 aa17.68■□□□□ 0.42
CCHCR1-214ENST00000486060 TNK2Q07912 1038 aa17.68■□□□□ 0.42
CCHCR1-214ENST00000486060 TCERG1LQ5VWI1 586 aa17.68■□□□□ 0.42
CCHCR1-214ENST00000486060 CLEC17AQ6ZS10 378 aa17.68■□□□□ 0.42
CCHCR1-214ENST00000486060 FILIP1Q7Z7B0 1213 aa17.68■□□□□ 0.42
CCHCR1-214ENST00000486060 CELF5Q8N6W0 485 aaKnown RBP17.68■□□□□ 0.42
CCHCR1-214ENST00000486060 CYP3A43Q9HB55 503 aa17.68■□□□□ 0.42
CCHCR1-214ENST00000486060 FAM49BQ9NUQ9 324 aa17.68■□□□□ 0.42
CCHCR1-214ENST00000486060 TDP1Q9NUW8 608 aa17.68■□□□□ 0.42
CCHCR1-214ENST00000486060 GTSE1Q9NYZ3 720 aa17.68■□□□□ 0.42
CCHCR1-214ENST00000486060 KIAA1468Q9P260 1216 aa17.68■□□□□ 0.42
CCHCR1-214ENST00000486060 FAM170BA6NMN3 283 aa17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 SOBPA7XYQ1 873 aa17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 DPYSL4O14531 572 aa17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 CD58P19256 250 aa17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 RFX1P22670 979 aa17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 ANXA13P27216 316 aa17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 STIM1Q13586 685 aa17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 UBXN2BQ14CS0 331 aa17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 FOXR2Q6PJQ5 311 aa17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 ARL14EPQ8N8R7 260 aaPredicted RBP17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 SCAMP5Q8TAC9 235 aa17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 TTC8Q8TAM2 541 aa17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 SLC2A14Q8TDB8 520 aa17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 CHFRQ96EP1 664 aa17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 CEP63Q96MT8 703 aa17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 MED10Q9BTT4 135 aa17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 IMPG2Q9BZV3 1241 aa17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 TRPC7Q9HCX4 862 aa17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 KRT82Q9NSB4 513 aa17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 IL37Q9NZH6 218 aa17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 ARMCX3Q9UH62 379 aaPredicted RBP17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 ZMYM5Q9UJ78 669 aa17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 PIAS3Q9Y6X2 628 aa17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 PIEZO1Q92508 2521 aa17.67■□□□□ 0.42
CCHCR1-214ENST00000486060 ZNF840PA6NDX5 716 aa17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 OTOL1A6NHN0 477 aaPredicted RBP17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 AP1G2O75843 785 aa17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 AVPR1AP37288 418 aa17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 PPP1R2P41236 205 aa17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 PGFP49763 221 aa17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 TAF10Q12962 218 aa17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 ZNF268Q14587 947 aaPredicted RBP17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 ARHGAP29Q52LW3 1261 aa17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 TRIM68Q6AZZ1 485 aa17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 TXNDC11Q6PKC3 985 aa17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 FRMD5Q7Z6J6 570 aa17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 YAF2Q8IY57 180 aa17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 MAML2Q8IZL2 1156 aaPredicted RBP17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 NUP93Q8N1F7 819 aa17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 CLDN23Q96B33 292 aa17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 SMARCD1Q96GM5 515 aa17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 FAM83CQ9BQN1 747 aa17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 OSBPL6Q9BZF3 934 aa17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 RNF38Q9H0F5 515 aa17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 CSNK1G1Q9HCP0 422 aa17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 HPS4Q9NQG7 708 aa17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 GKN1Q9NS71 199 aa17.66■□□□□ 0.42
CCHCR1-214ENST00000486060 HHLA1C9JL84 531 aa17.65■□□□□ 0.42
CCHCR1-214ENST00000486060 STX10O60499 249 aa17.65■□□□□ 0.42
CCHCR1-214ENST00000486060 FMO5P49326 533 aa17.65■□□□□ 0.42
CCHCR1-214ENST00000486060 SLC5A3P53794 718 aa17.65■□□□□ 0.42
CCHCR1-214ENST00000486060 IFRD2Q12894 506 aaPredicted RBP17.65■□□□□ 0.42
CCHCR1-214ENST00000486060 USP4Q13107 963 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms