RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 TAF12Q16514 161 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 DDR2Q16832 855 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 ZNF528Q3MIS6 628 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 ZNF667Q5HYK9 610 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 GPR158Q5T848 1215 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 C1orf210Q8IVY1 113 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 OR6B3Q8NGW1 331 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 FAM200AQ8TCP9 573 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 GIPC2Q8TF65 315 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 PCED1BQ96HM7 432 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 FAM84AQ96KN4 292 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 TNIP3Q96KP6 325 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 GCNAQ96QF7 691 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 MRPL45Q9BRJ2 306 aaKnown RBP7.47□□□□□ -1.21
VPS50-218ENST00000485994 BRD9Q9H8M2 597 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 KIF9Q9HAQ2 790 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 CYP3A43Q9HB55 503 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 LTB4R2Q9NPC1 389 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 TDP1Q9NUW8 608 aa7.47□□□□□ -1.21
VPS50-218ENST00000485994 THG1LQ9NWX6 298 aaKnown RBP7.47□□□□□ -1.21
VPS50-218ENST00000485994 FAM92AA1XBS5 289 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 A8MXQ7 604 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 H0Y858 1186 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 CETN3O15182 167 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 STX10O60499 249 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 KRT13P13646 458 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 BDNFP23560 247 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 GDI1P31150 447 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 PRCPP42785 496 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 PDE6CP51160 858 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 LRRC63Q05C16 580 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 PPP3CAQ08209 521 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 INCA1Q0VD86 236 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 PNOCQ13519 176 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 CAMK2BQ13554 666 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 ANGPT1Q15389 498 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 ZNF699Q32M78 642 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 SNX30Q5VWJ9 437 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 CEP135Q66GS9 1140 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 KRT39Q6A163 491 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 DENND5BQ6ZUT9 1274 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 PAQR9Q6ZVX9 377 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 FILIP1Q7Z7B0 1213 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 RALGPS2Q86X27 583 aaPredicted RBP7.46□□□□□ -1.22
VPS50-218ENST00000485994 FAM186BQ8IYM0 893 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 ADSSL1Q8N142 457 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 SYNPOQ8N3V7 929 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 TTC39CQ8N584 583 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 B3GALNT2Q8NCR0 500 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 BPIFB1Q8TDL5 484 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 OVCA2Q8WZ82 227 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 MRPS31Q92665 395 aaKnown RBP7.46□□□□□ -1.22
VPS50-218ENST00000485994 NELL1Q92832 810 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 DHTKD1Q96HY7 919 aaPredicted RBP7.46□□□□□ -1.22
VPS50-218ENST00000485994 LRRC3BQ96PB8 259 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 DUSP9Q99956 384 aaKnown RBP7.46□□□□□ -1.22
VPS50-218ENST00000485994 FAM83CQ9BQN1 747 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 BCO2Q9BYV7 579 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 ELOVL4Q9GZR5 314 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 SLITRK6Q9H5Y7 841 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 TMEM8AQ9HCN3 771 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 CSNK1G1Q9HCP0 422 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 HEBP1Q9NRV9 189 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 GCNT4Q9P109 453 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 FBXO4Q9UKT5 387 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 COQ4Q9Y3A0 265 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 NME7Q9Y5B8 376 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 MYO18AQ92614 2054 aaKnown RBP7.46□□□□□ -1.22
VPS50-218ENST00000485994 DMDP11532 3685 aa7.46□□□□□ -1.22
VPS50-218ENST00000485994 KIF26AQ9ULI4 1882 aaPredicted RBP7.45□□□□□ -1.22
VPS50-218ENST00000485994 OTOGLQ3ZCN5 2332 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 COL4A2P08572 1712 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 TNFRSF10BO14763 440 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 SLC16A3O15427 465 aaKnown RBP7.45□□□□□ -1.22
VPS50-218ENST00000485994 HCRTO43612 131 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 TADA3O75528 432 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 RTN3O95197 1032 aaPredicted RBP7.45□□□□□ -1.22
VPS50-218ENST00000485994 HLA-DRAP01903 254 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 USP17L7P0C7H9 530 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 TRIM21P19474 475 aaKnown RBP7.45□□□□□ -1.22
VPS50-218ENST00000485994 CCNE1P24864 410 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 AVPR1AP37288 418 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 GRIK1P39086 918 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 GPR15P49685 360 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 MRE11P49959 708 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 CDH8P55286 799 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 BIRC3Q13489 604 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 GRM2Q14416 872 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 STXBP5Q5T5C0 1151 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 TXNDC8Q6A555 127 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 ANKRD40Q6AI12 368 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 SMYD5Q6GMV2 418 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 CLEC17AQ6ZS10 378 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 TPRG1Q6ZUI0 275 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 FRMD5Q7Z6J6 570 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 ALYREFQ86V81 257 aaKnown RBP7.45□□□□□ -1.22
VPS50-218ENST00000485994 YAF2Q8IY57 180 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 NUP93Q8N1F7 819 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 ZNF276Q8N554 614 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 MAB21L3Q8N8X9 362 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms