RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 AAASQ9NRG9 546 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 MRFAP1Q9Y605 127 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 HHLA1C9JL84 531 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 H7C4K7 107 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 FANCGO15287 622 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 ADAM12O43184 909 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 MTA2O94776 668 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 ERBB2P04626 1255 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 CYP1A2P05177 515 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 NPR3P17342 541 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 ABCB4P21439 1286 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 RRM1P23921 792 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 PLA2G4AP47712 749 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 GABRB2P47870 512 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 GLUD2P49448 558 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 TSPY1Q01534 308 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 KIF5AQ12840 1032 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 MAPRE1Q15691 268 aaKnown RBP11.95□□□□□ -0.5
SND1-212ENST00000485871 PSMD5Q16401 504 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 C2CD6Q53TS8 623 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 PLEKHA7Q6IQ23 1121 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 LLGL2Q6P1M3 1020 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 TMEM110Q86TL2 294 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 KLHL23Q8NBE8 558 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 ADAMTS19Q8TE59 1207 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 RFFLQ8WZ73 363 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 SMOQ99835 787 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 C11orf70Q9BRQ4 267 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 RHOBTB2Q9BYZ6 727 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 ZBP1Q9H171 429 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 CYLDQ9NQC7 956 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 ADAM22Q9P0K1 906 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 HESX1Q9UBX0 185 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 YBX2Q9Y2T7 364 aaKnown RBP11.95□□□□□ -0.5
SND1-212ENST00000485871 CEP83Q9Y592 693 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 PCDHB12Q9Y5F1 795 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 PCDHA11Q9Y5I1 949 aa11.95□□□□□ -0.5
SND1-212ENST00000485871 MTMR11A4FU01 709 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 XPO1O14980 1071 aaKnown RBP11.94□□□□□ -0.5
SND1-212ENST00000485871 ATMINO43313 823 aaPredicted RBP11.94□□□□□ -0.5
SND1-212ENST00000485871 FAM200BP0CF97 657 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 MYBL1P10243 752 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 CTSAP10619 480 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 HOXD11P31277 338 aaPredicted RBP11.94□□□□□ -0.5
SND1-212ENST00000485871 GPC5P78333 572 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 GPR17Q13304 367 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 WHAMMP3Q1A5X7 153 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 CFAP221Q4G0U5 840 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 SLC39A12Q504Y0 691 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 ZNF569Q5MCW4 686 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 PPP1R15BQ5SWA1 713 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 PIGZQ86VD9 579 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 ERICH1Q86X53 443 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 XYLT1Q86Y38 959 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 DCP1BQ8IZD4 617 aaKnown RBP11.94□□□□□ -0.5
SND1-212ENST00000485871 VPS52Q8N1B4 723 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 FBXO22Q8NEZ5 403 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 CTNNBL1Q8WYA6 563 aaPredicted RBP11.94□□□□□ -0.5
SND1-212ENST00000485871 RIN2Q8WYP3 895 aaPredicted RBP11.94□□□□□ -0.5
SND1-212ENST00000485871 KCTD13Q8WZ19 329 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 UBXN4Q92575 508 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 ZNF653Q96CK0 615 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 TRIM11Q96F44 468 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 SMARCD1Q96GM5 515 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 FUBP3Q96I24 572 aaKnown RBP eCLIP11.94□□□□□ -0.5
SND1-212ENST00000485871 ASB2Q96Q27 587 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 WDR24Q96S15 920 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 UHRF1Q96T88 793 aaPredicted RBP11.94□□□□□ -0.5
SND1-212ENST00000485871 GAS2L1Q99501 681 aaPredicted RBP11.94□□□□□ -0.5
SND1-212ENST00000485871 CLSTN3Q9BQT9 956 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 C17orf80Q9BSJ5 609 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 PLVAPQ9BX97 442 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 UBXN6Q9BZV1 441 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 CRISPLD1Q9H336 500 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 OSGEPQ9NPF4 335 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 KRT82Q9NSB4 513 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 ARGLU1Q9NWB6 273 aaPredicted RBP11.94□□□□□ -0.5
SND1-212ENST00000485871 THEGQ9P2T0 379 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 CNOT8Q9UFF9 292 aaKnown RBP11.94□□□□□ -0.5
SND1-212ENST00000485871 CDC23Q9UJX2 597 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 COG5Q9UP83 839 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 LZTS1Q9Y250 596 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 CAPN6Q9Y6Q1 641 aa11.94□□□□□ -0.5
SND1-212ENST00000485871 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.93□□□□□ -0.5
SND1-212ENST00000485871 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.93□□□□□ -0.5
SND1-212ENST00000485871 WDR27A2RRH5 827 aa11.93□□□□□ -0.5
SND1-212ENST00000485871 E5RJQ4 531 aa11.93□□□□□ -0.5
SND1-212ENST00000485871 AP1G2O75843 785 aa11.93□□□□□ -0.5
SND1-212ENST00000485871 CALB1P05937 261 aa11.93□□□□□ -0.5
SND1-212ENST00000485871 TUBBP07437 444 aa11.93□□□□□ -0.5
SND1-212ENST00000485871 CA3P07451 260 aa11.93□□□□□ -0.5
SND1-212ENST00000485871 BDNFP23560 247 aa11.93□□□□□ -0.5
SND1-212ENST00000485871 DNAJB2P25686 324 aa11.93□□□□□ -0.5
SND1-212ENST00000485871 CTNNB1P35222 781 aa11.93□□□□□ -0.5
SND1-212ENST00000485871 PBX2P40425 430 aa11.93□□□□□ -0.5
SND1-212ENST00000485871 RGS7P49802 495 aa11.93□□□□□ -0.5
SND1-212ENST00000485871 CDR1P51861 262 aa11.93□□□□□ -0.5
SND1-212ENST00000485871 MRPS5P82675 430 aaKnown RBP11.93□□□□□ -0.5
SND1-212ENST00000485871 ROR1Q01973 937 aa11.93□□□□□ -0.5
SND1-212ENST00000485871 TAP1Q03518 808 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms