RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 IRX1P78414 480 aaPredicted RBP4.85□□□□□ -1.63
RTN4-213ENST00000485749 SRSF3P84103 164 aaKnown RBP4.85□□□□□ -1.63
RTN4-213ENST00000485749 GALNT1Q10472 559 aaPredicted RBP4.85□□□□□ -1.63
RTN4-213ENST00000485749 TFCP2Q12800 502 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 MALLQ13021 153 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 CUL4BQ13620 913 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 SPIDRQ14159 915 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 PAN2Q504Q3 1202 aaKnown RBP4.85□□□□□ -1.63
RTN4-213ENST00000485749 HSP90AA5PQ58FG0 334 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 KRBOX4Q5JUW0 171 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 SH2D4BQ5SQS7 431 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 ZBTB41Q5SVQ8 909 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 ADGRF1Q5T601 910 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 STEAP3Q658P3 488 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 MCTP2Q6DN12 878 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 KIAA1841Q6NSI8 718 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 KLHDC10Q6PID8 442 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 TMTC1Q8IUR5 882 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 LURAP1LQ8IV03 231 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 LYSMD2Q8IV50 215 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 RBM12BQ8IXT5 1001 aaKnown RBP4.85□□□□□ -1.63
RTN4-213ENST00000485749 PPM1NQ8N819 430 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 ZNF527Q8NB42 609 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 PCSK9Q8NBP7 692 aaKnown RBP4.85□□□□□ -1.63
RTN4-213ENST00000485749 OR14C36Q8NHC7 312 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 GDAP1Q8TB36 358 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 GOLGA5Q8TBA6 731 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 TSPEARQ8WU66 669 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 FAM216AQ8WUB2 273 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 HDAC10Q969S8 669 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 FOXRED1Q96CU9 486 aaPredicted RBP4.85□□□□□ -1.63
RTN4-213ENST00000485749 GIMAP5Q96F15 307 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 TMEM41AQ96HV5 264 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 FNBP1Q96RU3 617 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 APOL5Q9BWW9 433 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 KRTAP9-3Q9BYQ3 159 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 UNKQ9C0B0 810 aaKnown RBP4.85□□□□□ -1.63
RTN4-213ENST00000485749 ZCWPW1Q9H0M4 648 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 NT5C3AQ9H0P0 336 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 GHITMQ9H3K2 345 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 SEMA4AQ9H3S1 761 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 RABEP2Q9H5N1 569 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 DDX18Q9NVP1 670 aaKnown RBP4.85□□□□□ -1.63
RTN4-213ENST00000485749 TBCCD1Q9NVR7 557 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 ADPRHL2Q9NX46 363 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 ETAA1Q9NY74 926 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 GULP1Q9UBP9 304 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 STK39Q9UEW8 545 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 TBC1D29Q9UFV1 150 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 CHORDC1Q9UHD1 332 aaPredicted RBP4.85□□□□□ -1.63
RTN4-213ENST00000485749 PTBP2Q9UKA9 531 aaKnown RBP4.85□□□□□ -1.63
RTN4-213ENST00000485749 LIMCH1Q9UPQ0 1083 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 WASF3Q9UPY6 502 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 CARD8Q9Y2G2 431 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 PCDHGB5Q9Y5G0 923 aa4.85□□□□□ -1.63
RTN4-213ENST00000485749 PEG3Q9GZU2 1588 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 RAPGEF2Q9Y4G8 1499 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 ZNF804BA4D1E1 1349 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 FLT1P17948 1338 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 CYP2D7A0A087X1C5 515 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 A0A0G2JLL6 359 aaPredicted RBP4.84□□□□□ -1.63
RTN4-213ENST00000485749 LRRC72A6NJI9 287 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 FADS2P1A8MWK0 482 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 ISM1B1AKI9 464 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 HGSO14964 777 aaPredicted RBP4.84□□□□□ -1.63
RTN4-213ENST00000485749 ADAMTS3O15072 1205 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 DOK2O60496 412 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 SOCS5O75159 536 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 FGF18O76093 207 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 SERPINC1P01008 464 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 CYP1A2P05177 515 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 LPLP06858 475 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 THP07101 528 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 PFKMP08237 780 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 MC4RP32245 332 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 CA8P35219 290 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 ARL4AP40617 200 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 LIFRP42702 1097 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 MTIF2P46199 727 aaKnown RBP4.84□□□□□ -1.63
RTN4-213ENST00000485749 CEBPAP49715 358 aaPredicted RBP4.84□□□□□ -1.63
RTN4-213ENST00000485749 AFF3P51826 1226 aaKnown RBP4.84□□□□□ -1.63
RTN4-213ENST00000485749 CDR1P51861 262 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 RBM6P78332 1123 aaKnown RBP4.84□□□□□ -1.63
RTN4-213ENST00000485749 CYP4A11Q02928 519 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 RELQ04864 619 aaPredicted RBP4.84□□□□□ -1.63
RTN4-213ENST00000485749 SMAD4Q13485 552 aaKnown RBP4.84□□□□□ -1.63
RTN4-213ENST00000485749 COG2Q14746 738 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 STARD3Q14849 445 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 TAF5Q15542 800 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 ADRM1Q16186 407 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 PROSER3Q2NL68 480 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 FAM209BQ5JX69 171 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 GGT6Q6P531 493 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 KCNV1Q6PIU1 500 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 IKBIPQ70UQ0 350 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 TTC7BQ86TV6 843 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 RTN4RL1Q86UN2 441 aaPredicted RBP4.84□□□□□ -1.63
RTN4-213ENST00000485749 LZTR1Q8N653 840 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 TRIML2Q8N7C3 387 aa4.84□□□□□ -1.63
RTN4-213ENST00000485749 ANKRD53Q8N9V6 530 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms