RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 FOXD4L6Q3SYB3 417 aaPredicted RBP20.54■□□□□ 0.88
COL27A1-205ENST00000485397 FBXO43Q4G163 708 aa20.54■□□□□ 0.88
COL27A1-205ENST00000485397 FOXD4L3Q6VB84 417 aaPredicted RBP20.54■□□□□ 0.88
COL27A1-205ENST00000485397 UNC13DQ70J99 1090 aa20.54■□□□□ 0.88
COL27A1-205ENST00000485397 CAMKK1Q8N5S9 505 aa20.54■□□□□ 0.88
COL27A1-205ENST00000485397 OR6B3Q8NGW1 331 aa20.54■□□□□ 0.88
COL27A1-205ENST00000485397 ZNF516Q92618 1163 aa20.54■□□□□ 0.88
COL27A1-205ENST00000485397 CNTNAP3BQ96NU0 1288 aa20.54■□□□□ 0.88
COL27A1-205ENST00000485397 FNBP1Q96RU3 617 aa20.54■□□□□ 0.88
COL27A1-205ENST00000485397 CGRRF1Q99675 332 aa20.54■□□□□ 0.88
COL27A1-205ENST00000485397 CNTNAP3Q9BZ76 1288 aa20.54■□□□□ 0.88
COL27A1-205ENST00000485397 BLZF1Q9H2G9 400 aa20.54■□□□□ 0.88
COL27A1-205ENST00000485397 SNX25Q9H3E2 840 aa20.54■□□□□ 0.88
COL27A1-205ENST00000485397 TRPM5Q9NZQ8 1165 aa20.54■□□□□ 0.88
COL27A1-205ENST00000485397 ANAPC1Q9H1A4 1944 aa20.54■□□□□ 0.88
COL27A1-205ENST00000485397 F8VP50 259 aa20.53■□□□□ 0.88
COL27A1-205ENST00000485397 TCF3P15923 654 aa20.53■□□□□ 0.88
COL27A1-205ENST00000485397 ANXA13P27216 316 aa20.53■□□□□ 0.88
COL27A1-205ENST00000485397 EHHADHQ08426 723 aa20.53■□□□□ 0.88
COL27A1-205ENST00000485397 PSMD2Q13200 908 aa20.53■□□□□ 0.88
COL27A1-205ENST00000485397 SF3A2Q15428 464 aaKnown RBP20.53■□□□□ 0.88
COL27A1-205ENST00000485397 HS2ST1Q7LGA3 356 aa20.53■□□□□ 0.88
COL27A1-205ENST00000485397 XXYLT1Q8NBI6 393 aa20.53■□□□□ 0.88
COL27A1-205ENST00000485397 EXOC4Q96A65 974 aa20.53■□□□□ 0.88
COL27A1-205ENST00000485397 LOXL4Q96JB6 756 aa20.53■□□□□ 0.88
COL27A1-205ENST00000485397 GZF1Q9H116 711 aaPredicted RBP20.53■□□□□ 0.88
COL27A1-205ENST00000485397 DPEP3Q9H4B8 488 aa20.53■□□□□ 0.88
COL27A1-205ENST00000485397 GREB1Q4ZG55 1949 aa20.53■□□□□ 0.88
COL27A1-205ENST00000485397 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.52■□□□□ 0.88
COL27A1-205ENST00000485397 LEFTY2O00292 366 aa20.52■□□□□ 0.88
COL27A1-205ENST00000485397 TRIM66O15016 1216 aa20.52■□□□□ 0.88
COL27A1-205ENST00000485397 POLR2DO15514 142 aaKnown RBP20.52■□□□□ 0.88
COL27A1-205ENST00000485397 TACC1O75410 805 aa20.52■□□□□ 0.88
COL27A1-205ENST00000485397 EPN2O95208 641 aa20.52■□□□□ 0.88
COL27A1-205ENST00000485397 PTPN1P18031 435 aaKnown RBP20.52■□□□□ 0.88
COL27A1-205ENST00000485397 RAP1GAPP47736 663 aa20.52■□□□□ 0.88
COL27A1-205ENST00000485397 CACNA2D1P54289 1103 aa20.52■□□□□ 0.88
COL27A1-205ENST00000485397 NR1H3Q13133 447 aa20.52■□□□□ 0.88
COL27A1-205ENST00000485397 WDR72Q3MJ13 1102 aa20.52■□□□□ 0.88
COL27A1-205ENST00000485397 PPM1JQ5JR12 505 aa20.52■□□□□ 0.88
COL27A1-205ENST00000485397 CEP295NLQ96MC4 621 aa20.52■□□□□ 0.88
COL27A1-205ENST00000485397 TTLL2Q9BWV7 592 aa20.52■□□□□ 0.88
COL27A1-205ENST00000485397 RNF38Q9H0F5 515 aa20.52■□□□□ 0.88
COL27A1-205ENST00000485397 SLC39A2Q9NP94 309 aa20.52■□□□□ 0.88
COL27A1-205ENST00000485397 TMEM30AQ9NV96 361 aa20.52■□□□□ 0.88
COL27A1-205ENST00000485397 UBE4BO95155 1302 aa20.52■□□□□ 0.87
COL27A1-205ENST00000485397 ZNF840PA6NDX5 716 aa20.51■□□□□ 0.87
COL27A1-205ENST00000485397 ANTXRLA6NF34 631 aa20.51■□□□□ 0.87
COL27A1-205ENST00000485397 MYL6P60660 151 aa20.51■□□□□ 0.87
COL27A1-205ENST00000485397 TNNC1P63316 161 aa20.51■□□□□ 0.87
COL27A1-205ENST00000485397 DMC1Q14565 340 aa20.51■□□□□ 0.87
COL27A1-205ENST00000485397 AASDHQ4L235 1098 aaPredicted RBP20.51■□□□□ 0.87
COL27A1-205ENST00000485397 SYT13Q7L8C5 426 aa20.51■□□□□ 0.87
COL27A1-205ENST00000485397 C8orf48Q96LL4 319 aa20.51■□□□□ 0.87
COL27A1-205ENST00000485397 ZNF518BQ9C0D4 1074 aa20.51■□□□□ 0.87
COL27A1-205ENST00000485397 RXFP3Q9NSD7 469 aa20.51■□□□□ 0.87
COL27A1-205ENST00000485397 NXF1Q9UBU9 619 aaKnown RBP20.51■□□□□ 0.87
COL27A1-205ENST00000485397 CLDN5O00501 218 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 DCLK1O15075 740 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 FOXD2O60548 495 aaPredicted RBP20.5■□□□□ 0.87
COL27A1-205ENST00000485397 AKAP3O75969 853 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 NFATC1O95644 943 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 ABL1P00519 1130 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 ADRB1P08588 477 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 FAM163BP0C2L3 166 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 ZNF806P0C7X5 589 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 PFKLP17858 780 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 OPRD1P41143 372 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 AFMP43652 599 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 CASP4P49662 377 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 PDE6CP51160 858 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 SNRPFP62306 86 aaKnown RBP20.5■□□□□ 0.87
COL27A1-205ENST00000485397 NOP14P78316 857 aaKnown RBP20.5■□□□□ 0.87
COL27A1-205ENST00000485397 TAF10Q12962 218 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 TRPC3Q13507 836 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 CUL4BQ13620 913 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 GAB4Q2WGN9 574 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 PLEKHO2Q8TD55 490 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 B3GNT5Q9BYG0 378 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 XYLT2Q9H1B5 865 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 SMOC1Q9H4F8 434 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 MAGEF1Q9HAY2 307 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 SMPD4Q9NXE4 827 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 CPQQ9Y646 472 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 PTPRDP23468 1912 aa20.5■□□□□ 0.87
COL27A1-205ENST00000485397 A8MXQ7 604 aa20.49■□□□□ 0.87
COL27A1-205ENST00000485397 SCAMP3O14828 347 aaKnown RBP20.49■□□□□ 0.87
COL27A1-205ENST00000485397 APBB3O95704 486 aa20.49■□□□□ 0.87
COL27A1-205ENST00000485397 SLC7A9P82251 487 aa20.49■□□□□ 0.87
COL27A1-205ENST00000485397 IFRD2Q12894 506 aaPredicted RBP20.49■□□□□ 0.87
COL27A1-205ENST00000485397 BMT2Q1RMZ1 405 aa20.49■□□□□ 0.87
COL27A1-205ENST00000485397 PLK5Q496M5 336 aa20.49■□□□□ 0.87
COL27A1-205ENST00000485397 FILIP1Q7Z7B0 1213 aa20.49■□□□□ 0.87
COL27A1-205ENST00000485397 GRAMD1CQ8IYS0 662 aa20.49■□□□□ 0.87
COL27A1-205ENST00000485397 C12orf50Q8NA57 414 aaPredicted RBP20.49■□□□□ 0.87
COL27A1-205ENST00000485397 ACDQ96AP0 544 aa20.49■□□□□ 0.87
COL27A1-205ENST00000485397 ZC3H10Q96K80 434 aaKnown RBP20.49■□□□□ 0.87
COL27A1-205ENST00000485397 DUSP15Q9H1R2 295 aaPredicted RBP20.49■□□□□ 0.87
COL27A1-205ENST00000485397 EHD2Q9NZN4 543 aa20.49■□□□□ 0.87
COL27A1-205ENST00000485397 PCDHA7Q9UN72 937 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms