RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 PRR25Q96S07 402 aa5.5□□□□□ -1.53
SCAF11-207ENST00000484275 MAP3K14Q99558 947 aa5.5□□□□□ -1.53
SCAF11-207ENST00000484275 NUP88Q99567 741 aaPredicted RBP5.5□□□□□ -1.53
SCAF11-207ENST00000484275 TMEM79Q9BSE2 394 aa5.5□□□□□ -1.53
SCAF11-207ENST00000484275 CIPCQ9C0C6 399 aa5.5□□□□□ -1.53
SCAF11-207ENST00000484275 ASIC5Q9NY37 505 aa5.5□□□□□ -1.53
SCAF11-207ENST00000484275 IP6K2Q9UHH9 426 aa5.5□□□□□ -1.53
SCAF11-207ENST00000484275 AFG3L2Q9Y4W6 797 aa5.5□□□□□ -1.53
SCAF11-207ENST00000484275 PF4V1P10720 104 aa5.49□□□□□ -1.53
SCAF11-207ENST00000484275 PSG6Q00889 435 aa5.49□□□□□ -1.53
SCAF11-207ENST00000484275 GTF2H3Q13889 308 aa5.49□□□□□ -1.53
SCAF11-207ENST00000484275 ZNF260Q3ZCT1 412 aa5.49□□□□□ -1.53
SCAF11-207ENST00000484275 DNAJC5GQ8N7S2 189 aa5.49□□□□□ -1.53
SCAF11-207ENST00000484275 NT5C1BQ96P26 610 aa5.49□□□□□ -1.53
SCAF11-207ENST00000484275 HOMER2Q9NSB8 354 aa5.49□□□□□ -1.53
SCAF11-207ENST00000484275 A0A087WWL8 130 aa5.48□□□□□ -1.53
SCAF11-207ENST00000484275 A0A088AWK7 358 aa5.48□□□□□ -1.53
SCAF11-207ENST00000484275 CHRM5P08912 532 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-207ENST00000484275 CYP2C9P11712 490 aa5.48□□□□□ -1.53
SCAF11-207ENST00000484275 NPR1P16066 1061 aa5.48□□□□□ -1.53
SCAF11-207ENST00000484275 NEK2P51955 445 aa5.48□□□□□ -1.53
SCAF11-207ENST00000484275 ARFIP2P53365 341 aa5.48□□□□□ -1.53
SCAF11-207ENST00000484275 WNT3P56703 355 aa5.48□□□□□ -1.53
SCAF11-207ENST00000484275 KRT17Q04695 432 aa5.48□□□□□ -1.53
SCAF11-207ENST00000484275 LAMB3Q13751 1172 aa5.48□□□□□ -1.53
SCAF11-207ENST00000484275 BCDIN3DQ7Z5W3 292 aaKnown RBP5.48□□□□□ -1.53
SCAF11-207ENST00000484275 SLC15A4Q8N697 577 aa5.48□□□□□ -1.53
SCAF11-207ENST00000484275 NRACQ8N912 160 aa5.48□□□□□ -1.53
SCAF11-207ENST00000484275 TMEM171Q8WVE6 324 aa5.48□□□□□ -1.53
SCAF11-207ENST00000484275 MTFMTQ96DP5 389 aaKnown RBP5.48□□□□□ -1.53
SCAF11-207ENST00000484275 HOOK2Q96ED9 719 aa5.48□□□□□ -1.53
SCAF11-207ENST00000484275 C1GALT1C1Q96EU7 318 aa5.48□□□□□ -1.53
SCAF11-207ENST00000484275 HMCESQ96FZ2 354 aa5.48□□□□□ -1.53
SCAF11-207ENST00000484275 PUS7Q96PZ0 661 aaKnown RBP5.48□□□□□ -1.53
SCAF11-207ENST00000484275 MMS19Q96T76 1030 aa5.48□□□□□ -1.53
SCAF11-207ENST00000484275 TRNAU1APQ9NX07 287 aaKnown RBP5.48□□□□□ -1.53
SCAF11-207ENST00000484275 USP1O94782 785 aa5.47□□□□□ -1.53
SCAF11-207ENST00000484275 THP07101 528 aa5.47□□□□□ -1.53
SCAF11-207ENST00000484275 DLDP09622 509 aaKnown RBP5.47□□□□□ -1.53
SCAF11-207ENST00000484275 IL1R2P27930 398 aa5.47□□□□□ -1.53
SCAF11-207ENST00000484275 LRRC41Q15345 812 aa5.47□□□□□ -1.53
SCAF11-207ENST00000484275 PTCHD3Q3KNS1 767 aa5.47□□□□□ -1.53
SCAF11-207ENST00000484275 CERKLQ49MI3 558 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-207ENST00000484275 PXDC1Q5TGL8 231 aa5.47□□□□□ -1.53
SCAF11-207ENST00000484275 MTHFD1LQ6UB35 978 aa5.47□□□□□ -1.53
SCAF11-207ENST00000484275 SERPINA13PQ6UXR4 307 aa5.47□□□□□ -1.53
SCAF11-207ENST00000484275 ZNF517Q6ZMY9 492 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-207ENST00000484275 GAS2L3Q86XJ1 694 aa5.47□□□□□ -1.53
SCAF11-207ENST00000484275 COL23A1Q86Y22 540 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-207ENST00000484275 NANOGP1Q8N7R0 232 aa5.47□□□□□ -1.53
SCAF11-207ENST00000484275 PRSS3P2Q8NHM4 247 aa5.47□□□□□ -1.53
SCAF11-207ENST00000484275 DIS3LQ8TF46 1054 aaKnown RBP5.47□□□□□ -1.53
SCAF11-207ENST00000484275 WASF1Q92558 559 aa5.47□□□□□ -1.53
SCAF11-207ENST00000484275 COQ8BQ96D53 544 aa5.47□□□□□ -1.53
SCAF11-207ENST00000484275 EFHD1Q9BUP0 239 aa5.47□□□□□ -1.53
SCAF11-207ENST00000484275 DPCDQ9BVM2 203 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-207ENST00000484275 TRIM54Q9BYV2 358 aa5.47□□□□□ -1.53
SCAF11-207ENST00000484275 GABBR1Q9UBS5 961 aa5.47□□□□□ -1.53
SCAF11-207ENST00000484275 ANKRD6Q9Y2G4 727 aa5.47□□□□□ -1.53
SCAF11-207ENST00000484275 TMEM233B4DJY2 109 aa5.46□□□□□ -1.54
SCAF11-207ENST00000484275 ADAM10O14672 748 aa5.46□□□□□ -1.54
SCAF11-207ENST00000484275 ABLIM3O94929 683 aa5.46□□□□□ -1.54
SCAF11-207ENST00000484275 PRKCBP05771 671 aa5.46□□□□□ -1.54
SCAF11-207ENST00000484275 HOXB6P17509 224 aaKnown RBP5.46□□□□□ -1.54
SCAF11-207ENST00000484275 LINC00205P59089 165 aa5.46□□□□□ -1.54
SCAF11-207ENST00000484275 CTBP1Q13363 440 aa5.46□□□□□ -1.54
SCAF11-207ENST00000484275 FGL2Q14314 439 aa5.46□□□□□ -1.54
SCAF11-207ENST00000484275 FAM187BQ17R55 369 aa5.46□□□□□ -1.54
SCAF11-207ENST00000484275 MGAT5BQ3V5L5 792 aa5.46□□□□□ -1.54
SCAF11-207ENST00000484275 PLA1AQ53H76 456 aa5.46□□□□□ -1.54
SCAF11-207ENST00000484275 IFIT1BQ5T764 474 aaKnown RBP5.46□□□□□ -1.54
SCAF11-207ENST00000484275 MEX3CQ5U5Q3 659 aaKnown RBP5.46□□□□□ -1.54
SCAF11-207ENST00000484275 ZNF813Q6ZN06 617 aa5.46□□□□□ -1.54
SCAF11-207ENST00000484275 IRF2BP2Q7Z5L9 587 aa5.46□□□□□ -1.54
SCAF11-207ENST00000484275 C17orf80Q9BSJ5 609 aa5.46□□□□□ -1.54
SCAF11-207ENST00000484275 PIH1D1Q9NWS0 290 aaKnown RBP5.46□□□□□ -1.54
SCAF11-207ENST00000484275 LPAR3Q9UBY5 353 aa5.46□□□□□ -1.54
SCAF11-207ENST00000484275 UBE2Q2LH0YL09 131 aa5.45□□□□□ -1.54
SCAF11-207ENST00000484275 MYO1CO00159 1063 aa5.45□□□□□ -1.54
SCAF11-207ENST00000484275 AP1G1O43747 822 aa5.45□□□□□ -1.54
SCAF11-207ENST00000484275 OFD1O75665 1012 aa5.45□□□□□ -1.54
SCAF11-207ENST00000484275 FGAP02671 866 aa5.45□□□□□ -1.54
SCAF11-207ENST00000484275 VCAM1P19320 739 aa5.45□□□□□ -1.54
SCAF11-207ENST00000484275 NCLP19338 710 aaKnown RBP5.45□□□□□ -1.54
SCAF11-207ENST00000484275 HTR1BP28222 390 aa5.45□□□□□ -1.54
SCAF11-207ENST00000484275 HOXD9P28356 352 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-207ENST00000484275 AWAT1Q58HT5 328 aa5.45□□□□□ -1.54
SCAF11-207ENST00000484275 CRELD2Q6UXH1 353 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-207ENST00000484275 PPP1R35Q8TAP8 253 aa5.45□□□□□ -1.54
SCAF11-207ENST00000484275 BPIFB1Q8TDL5 484 aa5.45□□□□□ -1.54
SCAF11-207ENST00000484275 RAPGEF4Q8WZA2 1011 aa5.45□□□□□ -1.54
SCAF11-207ENST00000484275 PPP2R3CQ969Q6 453 aa5.45□□□□□ -1.54
SCAF11-207ENST00000484275 GBA2Q9HCG7 927 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-207ENST00000484275 AASDHPPTQ9NRN7 309 aa5.45□□□□□ -1.54
SCAF11-207ENST00000484275 CNNM1Q9NRU3 951 aa5.45□□□□□ -1.54
SCAF11-207ENST00000484275 TRMT13Q9NUP7 481 aaKnown RBP5.45□□□□□ -1.54
SCAF11-207ENST00000484275 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-207ENST00000484275 BTN3A1O00481 513 aa5.44□□□□□ -1.54
SCAF11-207ENST00000484275 SOCS2O14508 198 aa5.44□□□□□ -1.54
SCAF11-207ENST00000484275 MYCLP12524 364 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms