RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 MTMR3Q13615 1198 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 ZNF268Q14587 947 aaPredicted RBP5.73□□□□□ -1.49
COL17A1-206ENST00000483876 MAP9Q49MG5 647 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 VARS2Q5ST30 1063 aaKnown RBP5.73□□□□□ -1.49
COL17A1-206ENST00000483876 BEND6Q5SZJ8 279 aaPredicted RBP5.73□□□□□ -1.49
COL17A1-206ENST00000483876 LRRC38Q5VT99 294 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 CC2D1AQ6P1N0 951 aaPredicted RBP5.73□□□□□ -1.49
COL17A1-206ENST00000483876 FBXO38Q6PIJ6 1188 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 LCLAT1Q6UWP7 414 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 CXCL17Q6UXB2 119 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 MAATS1Q7Z4T9 603 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 CDR2LQ86X02 465 aaPredicted RBP5.73□□□□□ -1.49
COL17A1-206ENST00000483876 ERICH1Q86X53 443 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 HACE1Q8IYU2 909 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 CRYBG2Q8N1P7 616 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 WDTC1Q8N5D0 677 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 SLC43A3Q8NBI5 491 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 SUMF1Q8NBK3 374 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 SLC4A11Q8NBS3 891 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 NOA1Q8NC60 698 aaKnown RBP5.73□□□□□ -1.49
COL17A1-206ENST00000483876 KREMEN2Q8NCW0 462 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 CCDC26Q8TAB7 109 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 FEZF2Q8TBJ5 459 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 WHAMMQ8TF30 809 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 FNIP1Q8TF40 1166 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 STK32AQ8WU08 396 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 TMEM40Q8WWA1 233 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 CPA5Q8WXQ8 436 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 ZNF653Q96CK0 615 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 CAPZA3Q96KX2 299 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 RUNDC3BQ96NL0 473 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 ZSWIM1Q9BR11 485 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 NT5C1AQ9BXI3 368 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 EIF2AQ9BY44 585 aaKnown RBP5.73□□□□□ -1.49
COL17A1-206ENST00000483876 TRIM6Q9C030 488 aaPredicted RBP5.73□□□□□ -1.49
COL17A1-206ENST00000483876 SLITRK6Q9H5Y7 841 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 IGFLR1Q9H665 355 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 UBN1Q9NPG3 1134 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 HOMER3Q9NSC5 361 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 SLC38A7Q9NVC3 462 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.73□□□□□ -1.49
COL17A1-206ENST00000483876 SNTG2Q9NY99 539 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 FAM53CQ9NYF3 392 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 NXF1Q9UBU9 619 aaKnown RBP5.73□□□□□ -1.49
COL17A1-206ENST00000483876 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.73□□□□□ -1.49
COL17A1-206ENST00000483876 IP6K2Q9UHH9 426 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 L1RE1Q9UN81 338 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 AGAP1Q9UPQ3 857 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.73□□□□□ -1.49
COL17A1-206ENST00000483876 TRPV2Q9Y5S1 764 aa5.73□□□□□ -1.49
COL17A1-206ENST00000483876 V9GYY5 206 aaPredicted RBP5.73□□□□□ -1.49
COL17A1-206ENST00000483876 COL4A3Q01955 1670 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 FRYLO94915 3013 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 KPNA7A9QM74 516 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 KRIT1O00522 736 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 MAP2K7O14733 419 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 FSCN2O14926 492 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 LINC01565O15544 149 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 PI15O43692 258 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 RPS6KA5O75582 802 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 PROSCO94903 275 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 CHRNA1P02708 482 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 SETSIPP0DME0 302 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 AOC1P19801 751 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 RRM1P23921 792 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 CXCR5P32302 372 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 RPL9P32969 192 aaKnown RBP5.72□□□□□ -1.49
COL17A1-206ENST00000483876 GPD2P43304 727 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 DRG2P55039 364 aaKnown RBP5.72□□□□□ -1.49
COL17A1-206ENST00000483876 RWDD2BP57060 319 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 DEFB103AP81534 67 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 RBM10P98175 930 aaKnown RBP5.72□□□□□ -1.49
COL17A1-206ENST00000483876 MGAT3Q09327 533 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 TMEM62Q0P6H9 643 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 ITGA7Q13683 1181 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 PIGHQ14442 188 aaPredicted RBP5.72□□□□□ -1.49
COL17A1-206ENST00000483876 MESDQ14696 234 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 PTGISQ16647 500 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 SGO2Q562F6 1265 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 PPP1R15BQ5SWA1 713 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 NAA35Q5VZE5 725 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 C9orf57Q5W0N0 161 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 ARHGAP17Q68EM7 881 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 SCARA3Q6AZY7 606 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 GDF6Q6KF10 455 aaPredicted RBP5.72□□□□□ -1.49
COL17A1-206ENST00000483876 HDXQ7Z353 690 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 DNAAF5Q86Y56 855 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 IFT20Q8IY31 132 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 TOP6BLQ8N6T0 577 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 NIPA2Q8N8Q9 360 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 SMG8Q8ND04 991 aaKnown RBP5.72□□□□□ -1.49
COL17A1-206ENST00000483876 C3orf20Q8ND61 904 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 ADAM32Q8TC27 787 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 SPATA18Q8TC71 538 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 MAIP1Q8WWC4 291 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 TFAP2BQ92481 460 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 C18orf8Q96DM3 657 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 MSLNLQ96KJ4 702 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 FAM84AQ96KN4 292 aa5.72□□□□□ -1.49
COL17A1-206ENST00000483876 ZNF560Q96MR9 790 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms