RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 KCNB1Q14721 858 aa11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 ZNF423Q2M1K9 1284 aa11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 SV2CQ496J9 727 aa11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 INTS6LQ5JSJ4 861 aaKnown RBP11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 DTHD1Q6ZMT9 781 aa11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 FILIP1Q7Z7B0 1213 aa11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 OSTM1Q86WC4 334 aa11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 C12orf40Q86WS4 652 aa11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 SCN4BQ8IWT1 228 aa11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 PGBD3Q8N328 593 aa11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 LEO1Q8WVC0 666 aaPredicted RBP11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 HNRNPLLQ8WVV9 542 aaKnown RBP11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 FAM84AQ96KN4 292 aa11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 REEP2Q9BRK0 252 aa11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 ASB7Q9H672 318 aa11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 ABCB6Q9NP58 842 aa11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 DDX43Q9NXZ2 648 aaKnown RBP11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 L1RE1Q9UN81 338 aa11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 KALRNO60229 2985 aa11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 ACACAQ13085 2346 aa11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 MYOFQ9NZM1 2061 aa11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 TCRBV21S2A2A0A5A6 115 aa11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 LEFTY2O00292 366 aa11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 SH3BP5O60239 455 aa11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 KAT7O95251 611 aa11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 RDXP35241 583 aaKnown RBP11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 HOXD12P35452 270 aa11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 PRPHP41219 470 aa11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 NEK4P51957 841 aa11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 WNT7BP56706 349 aa11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 ATP2C1P98194 919 aaPredicted RBP11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 RPL6Q02878 288 aaKnown RBP11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 KDSRQ06136 332 aa11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 DHCR24Q15392 516 aa11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 TRIP6Q15654 476 aaKnown RBP11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 DUOXA1Q1HG43 343 aa11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 SPDYCQ5MJ68 293 aa11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 LMBRD2Q68DH5 695 aaPredicted RBP11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 CRELD2Q6UXH1 353 aaPredicted RBP11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 CCDC83Q8IWF9 413 aa11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 ADGRG2Q8IZP9 1017 aa11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 MYCT1Q8N699 235 aa11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 MDM1Q8TC05 714 aa11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 FIZ1Q96SL8 496 aa11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 PNKPQ96T60 521 aa11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 ACBD6Q9BR61 282 aa11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 POLMQ9NP87 494 aaPredicted RBP11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 KCND2Q9NZV8 630 aa11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 RAXQ9Y2V3 346 aa11.67□□□□□ -0.54
SMARCC1-205ENST00000483847 MYMKA6NI61 221 aa11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 LAD1O00515 517 aa11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 ARHGAP33O14559 1287 aa11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 ATP2C2O75185 946 aa11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 FTH1P19P0C7X4 201 aa11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 POLR2BP30876 1174 aaKnown RBP11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 DPP6P42658 865 aa11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 USP46P62068 366 aa11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 DHX8Q14562 1220 aaKnown RBP11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 TMEM119Q4V9L6 283 aa11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 EOGTQ5NDL2 527 aa11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 ADALQ6DHV7 355 aa11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 RHBDF2Q6PJF5 856 aa11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 CCNI2Q6ZMN8 369 aaPredicted RBP11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 GPBP1Q86WP2 473 aa11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 SPATA2LQ8IUW3 424 aaPredicted RBP11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 SLC41A1Q8IVJ1 513 aa11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 FSIP1Q8NA03 581 aa11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 CEP76Q8TAP6 659 aa11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 SPATA18Q8TC71 538 aa11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 ADAMTS14Q8WXS8 1223 aa11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 RNF38Q9H0F5 515 aa11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 CCDC86Q9H6F5 360 aaKnown RBP11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 DNAAF2Q9NVR5 837 aaKnown RBP11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 SMPD4Q9NXE4 827 aa11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 AGO2Q9UKV8 859 aaKnown RBP11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 ODF2LQ9ULJ1 636 aa11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 TENM4Q6N022 2769 aa11.66□□□□□ -0.54
SMARCC1-205ENST00000483847 PTPRBP23467 1997 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 CFAP46Q8IYW2 2715 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 MYO18AQ92614 2054 aaKnown RBP11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 A0A0A0MRY4 1105 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 AP5Z1O43299 807 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 TRAK2O60296 914 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 GJB3O75712 270 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 FAM13AO94988 1023 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 APODP05090 189 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 ITGB3P05106 788 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 GABRG2P18507 467 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 ZNF131P52739 623 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 GTF2BQ00403 316 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 ZNF33AQ06730 810 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 RESTQ13127 1097 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 BYSLQ13895 437 aaKnown RBP11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 CFAP221Q4G0U5 840 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 HSF5Q4G112 596 aaPredicted RBP11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 SLCO6A1Q86UG4 719 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 PHTF2Q8N3S3 785 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 ZSWIM2Q8NEG5 633 aa11.65□□□□□ -0.54
SMARCC1-205ENST00000483847 LRIG1Q96JA1 1093 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms