RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 CCL5P13501 91 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 ADORA2BP29275 332 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 HSPA9P38646 679 aaKnown RBP9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 SCNN1GP51170 649 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 PLTPP55058 493 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 NNTQ13423 1086 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 TRIP13Q15645 432 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 C15orf59Q2T9L4 293 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 ZFYVE27Q5T4F4 411 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 UBAP2Q5T6F2 1119 aaKnown RBP9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 LRRC38Q5VT99 294 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 OR6B2Q6IFH4 312 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 OLFML1Q6UWY5 402 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 CYP4V2Q6ZWL3 525 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 TMEM110Q86TL2 294 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 MREGQ8N565 214 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 TTC39CQ8N584 583 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 RNF169Q8NCN4 708 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 SLC2A14Q8TDB8 520 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 ZNF333Q96JL9 665 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 PEBP4Q96S96 227 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 SLC4A5Q9BY07 1137 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 LRRC4CQ9HCJ2 640 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 CHST12Q9NRB3 414 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 VPS18Q9P253 973 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 WDR35Q9P2L0 1181 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 SAE1Q9UBE0 346 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 TIMM13Q9Y5L4 95 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 LRRD1A4D1F6 860 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 C2CD4BA6NLJ0 364 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 GPR182O15218 404 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 BEST1O76090 585 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 POMCP01189 267 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 KRT1P04264 644 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 TFE3P19532 575 aaPredicted RBP9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 IVDP26440 423 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 MIPP30301 263 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 HSD17B3P37058 310 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 CDKN2BP42772 138 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 FNTAP49354 379 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 MBTPS1Q14703 1052 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 TERF2Q15554 542 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 PKN2Q16513 984 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 ARHGAP17Q68EM7 881 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 SPOCD1Q6ZMY3 1216 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 TMC3Q7Z5M5 1100 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 RCOR2Q8IZ40 523 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 ADGRF2Q8IZF7 708 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 GLIS1Q8NBF1 620 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 OR2W6PQ8NHA6 318 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 CFAP57Q96MR6 1250 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 ZNF560Q96MR9 790 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 DEFB118Q96PH6 123 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 MIS12Q9H081 205 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 RAB17Q9H0T7 212 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 NEU2Q9Y3R4 380 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 CASTOR2A6NHX0 329 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 CLDN5O00501 218 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 CYB561D2O14569 222 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 XPOTO43592 962 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 RNF40O75150 1001 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 THP07101 528 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 PNPLA4P41247 253 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 RABGGTBP53611 331 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 DRG2P55039 364 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 PRMT2P55345 433 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 KRT17Q04695 432 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 DSC3Q14574 896 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 PAN2Q504Q3 1202 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 TRAF7Q6Q0C0 670 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 PAQR9Q6ZVX9 377 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 ANKRD52Q8NB46 1076 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 KCNV2Q8TDN2 545 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 RXFP2Q8WXD0 754 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 NDRG1Q92597 394 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 SLCO2A1Q92959 643 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 ARL8AQ96BM9 186 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 HAUS1Q96CS2 278 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 SH3GL2Q99962 352 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 ADAM2Q99965 735 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 TXLNGYQ9BZA5 131 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 MED4Q9NPJ6 270 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 FAM114A2Q9NRY5 505 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 NOD1Q9Y239 953 aa9.29□□□□□ -0.92
CDC42SE1-204ENST00000483763 hCG_1818297A0A087WSY0 165 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 A0A0U1RQF3 1178 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 F8W810 466 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 H0YGN5 161 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 I3L4J1 428 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 PODXLO00592 558 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 GABRDO14764 452 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 HUS1O60921 280 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 ECEL1O95672 775 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 PDGFRAP16234 1089 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 ZNF143P52747 638 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 ATP11AP98196 1134 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 GABPB1Q06547 395 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 DHX9Q08211 1270 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 CDO1Q16878 200 aa9.28□□□□□ -0.92
CDC42SE1-204ENST00000483763 SV2CQ496J9 727 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms