RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 KRT38O76015 456 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 NTSR2O95665 410 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 PRDX5P30044 214 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 GCH1P30793 250 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 BUD31P41223 144 aaPredicted RBP5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 MAP2K3P46734 347 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 CTCFP49711 727 aaPredicted RBP5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 FLT3LGP49771 235 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 CDK7P50613 346 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 HDAC4P56524 1084 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 POLR2FP61218 127 aaKnown RBP5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 ARF5P84085 180 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 TLE1Q04724 770 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 SCN1BQ07699 218 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 GOLGA8DPQ0D2H9 430 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 COASYQ13057 564 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 SLC29A2Q14542 456 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 MYBPC3Q14896 1274 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 PPP2R5BQ15173 497 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 NFIL3Q16649 462 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 MAN2A1Q16706 1144 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 C9orf152Q5JTZ5 239 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 FAXCQ5TGI0 409 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 STEAP3Q658P3 488 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 HMBOX1Q6NT76 420 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 C22orf34Q6ZV56 151 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 NLRP10Q86W26 655 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 MICU3Q86XE3 530 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 NBPF5PQ86XG9 351 aaPredicted RBP5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 RASGRP3Q8IV61 690 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 MPP5Q8N3R9 675 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 POGLUT1Q8NBL1 392 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 SCAMP5Q8TAC9 235 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 METTL6Q8TCB7 284 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 CSGALNACT1Q8TDX6 532 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 SLC22A17Q8WUG5 538 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 SPSB4Q96A44 273 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 RMDN1Q96DB5 314 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 SIPA1Q96FS4 1042 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 VPS39Q96JC1 886 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 NT5C3AQ9H0P0 336 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 MRPL46Q9H2W6 279 aaKnown RBP5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 MTG2Q9H4K7 406 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 ZBTB26Q9HCK0 441 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 GIMAP4Q9NUV9 329 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 FTSJ1Q9UET6 329 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 SMC3Q9UQE7 1217 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 ACTL7BQ9Y614 415 aa5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 EPN1Q9Y6I3 576 aaPredicted RBP5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.51□□□□□ -1.53
R3HDM1-216ENST00000483065 SPAG9O60271 1321 aaKnown RBP5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 A0A0U1RQK1 487 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 ZNF320A2RRD8 509 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 FAM25EA8MYX2 175 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 DNPH1O43598 174 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 PRPSAP2O60256 369 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 TSC22D2O75157 780 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 ABHD16AO95870 558 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 CBX7O95931 251 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 GNAI2P04899 355 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 MMEP08473 750 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 SPARCP09486 303 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 MYBL1P10243 752 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 PCP11498 1178 aaKnown RBP5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 XRCC6P12956 609 aaKnown RBP eCLIP5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 SYN1P17600 705 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 MAPK4P31152 587 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 PNLIPRP1P54315 467 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 CORO7P57737 925 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 SNRPNP63162 240 aaKnown RBP5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 PPP3CAQ08209 521 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 COX10Q12887 443 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 TNFAIP1Q13829 316 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 EMC4Q5J8M3 183 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 LIPMQ5VYY2 423 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 H1FNTQ75WM6 255 aaPredicted RBP5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 PPP1R42Q7Z4L9 355 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 ZNF804AQ7Z570 1209 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 ADGRF2Q8IZF7 708 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 GALNT11Q8NCW6 608 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 GABPB2Q8TAK5 448 aaPredicted RBP5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 SMARCC2Q8TAQ2 1214 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 BICD2Q8TD16 824 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 DDX17Q92841 729 aaKnown RBP5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 SYAP1Q96A49 352 aaPredicted RBP5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 VPS33AQ96AX1 596 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 FOXRED1Q96CU9 486 aaPredicted RBP5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 PGAP3Q96FM1 320 aaPredicted RBP5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 UHRF1Q96T88 793 aaPredicted RBP5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 MDFIQ99750 246 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 PITHD1Q9GZP4 211 aaPredicted RBP5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 ADAM7Q9H2U9 754 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 MMADHCQ9H3L0 296 aaPredicted RBP5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 THAP9Q9H5L6 903 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 SMURF2Q9HAU4 748 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 PDE7BQ9NP56 450 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 AP5S1Q9NUS5 200 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 FAM105AQ9NUU6 356 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 EXTL2Q9UBQ6 330 aa5.5□□□□□ -1.53
R3HDM1-216ENST00000483065 SEC63Q9UGP8 760 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms