RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 KRT82Q9NSB4 513 aa17.6■□□□□ 0.41
VAMP4-204ENST00000482519 FAM49BQ9NUQ9 324 aa17.6■□□□□ 0.41
VAMP4-204ENST00000482519 TDP1Q9NUW8 608 aa17.6■□□□□ 0.41
VAMP4-204ENST00000482519 TMEM30AQ9NV96 361 aa17.6■□□□□ 0.41
VAMP4-204ENST00000482519 FAM86C1Q9NVL1 165 aa17.6■□□□□ 0.41
VAMP4-204ENST00000482519 THG1LQ9NWX6 298 aaKnown RBP17.6■□□□□ 0.41
VAMP4-204ENST00000482519 OBP2AQ9NY56 170 aa17.6■□□□□ 0.41
VAMP4-204ENST00000482519 EHD2Q9NZN4 543 aa17.6■□□□□ 0.41
VAMP4-204ENST00000482519 NDRG2Q9UN36 371 aaKnown RBP17.6■□□□□ 0.41
VAMP4-204ENST00000482519 PIAS3Q9Y6X2 628 aa17.6■□□□□ 0.41
VAMP4-204ENST00000482519 GREB1Q4ZG55 1949 aa17.6■□□□□ 0.41
VAMP4-204ENST00000482519 TRAV19A0A0A6YYK7 116 aa17.59■□□□□ 0.41
VAMP4-204ENST00000482519 C2orf78A6NCI8 922 aa17.59■□□□□ 0.41
VAMP4-204ENST00000482519 CHADO15335 359 aa17.59■□□□□ 0.41
VAMP4-204ENST00000482519 CKMP06732 381 aa17.59■□□□□ 0.41
VAMP4-204ENST00000482519 WEE1P30291 646 aa17.59■□□□□ 0.41
VAMP4-204ENST00000482519 CBWD6Q4V339 395 aa17.59■□□□□ 0.41
VAMP4-204ENST00000482519 ARHGAP29Q52LW3 1261 aa17.59■□□□□ 0.41
VAMP4-204ENST00000482519 CBWD3Q5JTY5 395 aa17.59■□□□□ 0.41
VAMP4-204ENST00000482519 CBWD5Q5RIA9 395 aa17.59■□□□□ 0.41
VAMP4-204ENST00000482519 UNC93AQ86WB7 457 aa17.59■□□□□ 0.41
VAMP4-204ENST00000482519 ZC3H3Q8IXZ2 948 aaKnown RBP17.59■□□□□ 0.41
VAMP4-204ENST00000482519 FUKQ8N0W3 1084 aa17.59■□□□□ 0.41
VAMP4-204ENST00000482519 ARL14EPQ8N8R7 260 aaPredicted RBP17.59■□□□□ 0.41
VAMP4-204ENST00000482519 C12orf29Q8N999 325 aa17.59■□□□□ 0.41
VAMP4-204ENST00000482519 SLC2A14Q8TDB8 520 aa17.59■□□□□ 0.41
VAMP4-204ENST00000482519 SMARCD1Q96GM5 515 aa17.59■□□□□ 0.41
VAMP4-204ENST00000482519 CEP295NLQ96MC4 621 aa17.59■□□□□ 0.41
VAMP4-204ENST00000482519 SLC22A12Q96S37 553 aa17.59■□□□□ 0.41
VAMP4-204ENST00000482519 CYP3A43Q9HB55 503 aa17.59■□□□□ 0.41
VAMP4-204ENST00000482519 LTB4R2Q9NPC1 389 aa17.59■□□□□ 0.41
VAMP4-204ENST00000482519 RAB20Q9NX57 234 aa17.59■□□□□ 0.41
VAMP4-204ENST00000482519 TRPM5Q9NZQ8 1165 aa17.59■□□□□ 0.41
VAMP4-204ENST00000482519 MRPS17Q9Y2R5 130 aaKnown RBP17.59■□□□□ 0.41
VAMP4-204ENST00000482519 MIA3Q5JRA6 1907 aa17.59■□□□□ 0.41
VAMP4-204ENST00000482519 BICDL2A1A5D9 508 aa17.58■□□□□ 0.4
VAMP4-204ENST00000482519 MAN2B1O00754 1011 aa17.58■□□□□ 0.4
VAMP4-204ENST00000482519 AP1G2O75843 785 aa17.58■□□□□ 0.4
VAMP4-204ENST00000482519 USP17L7P0C7H9 530 aa17.58■□□□□ 0.4
VAMP4-204ENST00000482519 HDCP19113 662 aa17.58■□□□□ 0.4
VAMP4-204ENST00000482519 ADORA2BP29275 332 aa17.58■□□□□ 0.4
VAMP4-204ENST00000482519 SOX9P48436 509 aa17.58■□□□□ 0.4
VAMP4-204ENST00000482519 CC2D1AQ6P1N0 951 aaPredicted RBP17.58■□□□□ 0.4
VAMP4-204ENST00000482519 PAQR9Q6ZVX9 377 aa17.58■□□□□ 0.4
VAMP4-204ENST00000482519 CRYBG2Q8N1P7 616 aa17.58■□□□□ 0.4
VAMP4-204ENST00000482519 TWNKQ96RR1 684 aa17.58■□□□□ 0.4
VAMP4-204ENST00000482519 DUSP9Q99956 384 aaKnown RBP17.58■□□□□ 0.4
VAMP4-204ENST00000482519 NT5C1AQ9BXI3 368 aa17.58■□□□□ 0.4
VAMP4-204ENST00000482519 IRF2BPLQ9H1B7 796 aa17.58■□□□□ 0.4
VAMP4-204ENST00000482519 DMAP1Q9NPF5 467 aaPredicted RBP17.58■□□□□ 0.4
VAMP4-204ENST00000482519 TRPV5Q9NQA5 729 aa17.58■□□□□ 0.4
VAMP4-204ENST00000482519 GTSE1Q9NYZ3 720 aa17.58■□□□□ 0.4
VAMP4-204ENST00000482519 MYH10P35580 1976 aa17.58■□□□□ 0.4
VAMP4-204ENST00000482519 SOBPA7XYQ1 873 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 ARNTLO00327 626 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 GLULP15104 373 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 TARSP26639 723 aaKnown RBP17.57■□□□□ 0.4
VAMP4-204ENST00000482519 YWHAQP27348 245 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 MCCD1P59942 119 aaPredicted RBP17.57■□□□□ 0.4
VAMP4-204ENST00000482519 TNK2Q07912 1038 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 INCA1Q0VD86 236 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 TAF10Q12962 218 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 PAK1Q13153 545 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 ANGPT1Q15389 498 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 ZNF394Q53GI3 561 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 TTI2Q6NXR4 508 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 FRMD5Q7Z6J6 570 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 FILIP1Q7Z7B0 1213 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 NUP93Q8N1F7 819 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 FAM3CQ92520 227 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 TATDN2Q93075 761 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 SLC35C1Q96A29 364 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 JAKMIP2Q96AA8 810 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 CEP63Q96MT8 703 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 SLITRK1Q96PX8 696 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 NELL2Q99435 816 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 PHOX2BQ99453 314 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 DNAI2Q9GZS0 605 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 METTL14Q9HCE5 456 aaKnown RBP17.57■□□□□ 0.4
VAMP4-204ENST00000482519 GKN1Q9NS71 199 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 KIAA1468Q9P260 1216 aa17.57■□□□□ 0.4
VAMP4-204ENST00000482519 ZNF840PA6NDX5 716 aa17.56■□□□□ 0.4
VAMP4-204ENST00000482519 NCAM2O15394 837 aa17.56■□□□□ 0.4
VAMP4-204ENST00000482519 MAP3K7CLP57077 242 aa17.56■□□□□ 0.4
VAMP4-204ENST00000482519 PLCB2Q00722 1185 aa17.56■□□□□ 0.4
VAMP4-204ENST00000482519 LRMPQ12912 555 aa17.56■□□□□ 0.4
VAMP4-204ENST00000482519 SCAMP5Q8TAC9 235 aa17.56■□□□□ 0.4
VAMP4-204ENST00000482519 FBXO32Q969P5 355 aa17.56■□□□□ 0.4
VAMP4-204ENST00000482519 CYFIP2Q96F07 1278 aa17.56■□□□□ 0.4
VAMP4-204ENST00000482519 HEXIM2Q96MH2 286 aaKnown RBP17.56■□□□□ 0.4
VAMP4-204ENST00000482519 ARID3AQ99856 593 aa17.56■□□□□ 0.4
VAMP4-204ENST00000482519 TTLL2Q9BWV7 592 aa17.56■□□□□ 0.4
VAMP4-204ENST00000482519 KIF9Q9HAQ2 790 aa17.56■□□□□ 0.4
VAMP4-204ENST00000482519 SPATA6Q9NWH7 488 aaPredicted RBP17.56■□□□□ 0.4
VAMP4-204ENST00000482519 DLGAP2Q9P1A6 1054 aa17.56■□□□□ 0.4
VAMP4-204ENST00000482519 ANAPC1Q9H1A4 1944 aa17.56■□□□□ 0.4
VAMP4-204ENST00000482519 SHISA7A6NL88 538 aa17.55■□□□□ 0.4
VAMP4-204ENST00000482519 CILPO75339 1184 aa17.55■□□□□ 0.4
VAMP4-204ENST00000482519 BEST1O76090 585 aa17.55■□□□□ 0.4
VAMP4-204ENST00000482519 RTN3O95197 1032 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms