RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 ACRBPQ8NEB7 543 aa12.26□□□□□ -0.45
HPS4-212ENST00000481910 SPPL2BQ8TCT7 592 aa12.26□□□□□ -0.45
HPS4-212ENST00000481910 TLE6Q9H808 572 aa12.26□□□□□ -0.45
HPS4-212ENST00000481910 HESX1Q9UBX0 185 aa12.26□□□□□ -0.45
HPS4-212ENST00000481910 AFF4Q9UHB7 1163 aaKnown RBP12.26□□□□□ -0.45
HPS4-212ENST00000481910 TSPAN16Q9UKR8 245 aa12.26□□□□□ -0.45
HPS4-212ENST00000481910 BZW2Q9Y6E2 419 aaKnown RBP12.26□□□□□ -0.45
HPS4-212ENST00000481910 TGM5O43548 720 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 SERPING1P05155 500 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 BDNFP23560 247 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 CYP2F1P24903 491 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 ELF1P32519 619 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 PRKCIP41743 596 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 GSDMDP57764 484 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 DUSP4Q13115 394 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 CFAP221Q4G0U5 840 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 WDR59Q6PJI9 974 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 LCLAT1Q6UWP7 414 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 PAQR9Q6ZVX9 377 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 C2orf15Q8WU43 125 aaKnown RBP12.25□□□□□ -0.45
HPS4-212ENST00000481910 SLC20A1Q8WUM9 679 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 PPP2R3CQ969Q6 453 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 FUBP3Q96I24 572 aaKnown RBP eCLIP12.25□□□□□ -0.45
HPS4-212ENST00000481910 RHOBTB2Q9BYZ6 727 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 ZNF518BQ9C0D4 1074 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 LMCD1Q9NZU5 365 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 NOCTQ9UK39 431 aaKnown RBP12.25□□□□□ -0.45
HPS4-212ENST00000481910 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.25□□□□□ -0.45
HPS4-212ENST00000481910 SLC27A5Q9Y2P5 690 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 CHD9Q3L8U1 2897 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 ATP8B3O60423 1300 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 ATG2AQ2TAZ0 1938 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 CLASP2O75122 1294 aaKnown RBP12.25□□□□□ -0.45
HPS4-212ENST00000481910 PPFIA2O75334 1257 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 GLUD1P00367 558 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 MMEP08473 750 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 CFHP08603 1231 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 IGFBP4P22692 258 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 NRIP1P48552 1158 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 CLCN4P51793 760 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 CDR2Q01850 454 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 TERF2Q15554 542 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 GOLGA7BQ2TAP0 167 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 HGSNATQ68CP4 663 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 LILRA6Q6PI73 481 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 FAM35AQ86V20 835 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 ZNF677Q86XU0 584 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 ANKRD52Q8NB46 1076 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 UBA3Q8TBC4 463 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 DDX1Q92499 740 aaKnown RBP12.25□□□□□ -0.45
HPS4-212ENST00000481910 SMARCD1Q96GM5 515 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 PDLIM2Q96JY6 352 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 PANX2Q96RD6 677 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 AGPAT1Q99943 283 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 NSUN3Q9H649 340 aaKnown RBP12.25□□□□□ -0.45
HPS4-212ENST00000481910 CYP4F11Q9HBI6 524 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 ABCB6Q9NP58 842 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 KRT82Q9NSB4 513 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 SEPT11Q9NVA2 429 aaKnown RBP12.25□□□□□ -0.45
HPS4-212ENST00000481910 SSUH2Q9Y2M2 353 aa12.25□□□□□ -0.45
HPS4-212ENST00000481910 CHD7Q9P2D1 2997 aa12.24□□□□□ -0.45
HPS4-212ENST00000481910 M0QYV0 167 aa12.24□□□□□ -0.45
HPS4-212ENST00000481910 PRRG1O14668 218 aa12.24□□□□□ -0.45
HPS4-212ENST00000481910 AP1G2O75843 785 aa12.24□□□□□ -0.45
HPS4-212ENST00000481910 MICAL2O94851 1124 aa12.24□□□□□ -0.45
HPS4-212ENST00000481910 VNN2O95498 520 aa12.24□□□□□ -0.45
HPS4-212ENST00000481910 PLEKP08567 350 aaPredicted RBP12.24□□□□□ -0.45
HPS4-212ENST00000481910 FAM200BP0CF97 657 aa12.24□□□□□ -0.45
HPS4-212ENST00000481910 TNFAIP3P21580 790 aa12.24□□□□□ -0.45
HPS4-212ENST00000481910 GRIK1P39086 918 aa12.24□□□□□ -0.45
HPS4-212ENST00000481910 SLC8A3P57103 927 aa12.24□□□□□ -0.45
HPS4-212ENST00000481910 MGAT5BQ3V5L5 792 aa12.24□□□□□ -0.45
HPS4-212ENST00000481910 DNAJC21Q5F1R6 531 aaKnown RBP12.24□□□□□ -0.45
HPS4-212ENST00000481910 GPR153Q6NV75 609 aa12.24□□□□□ -0.45
HPS4-212ENST00000481910 ZNF571Q7Z3V5 609 aaPredicted RBP12.24□□□□□ -0.45
HPS4-212ENST00000481910 TTC9BQ8N6N2 239 aa12.24□□□□□ -0.45
HPS4-212ENST00000481910 GAS2L1Q99501 681 aaPredicted RBP12.24□□□□□ -0.45
HPS4-212ENST00000481910 SEPT5Q99719 369 aaPredicted RBP12.24□□□□□ -0.45
HPS4-212ENST00000481910 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.24□□□□□ -0.45
HPS4-212ENST00000481910 DUSP16Q9BY84 665 aa12.24□□□□□ -0.45
HPS4-212ENST00000481910 ARHGAP20Q9P2F6 1191 aa12.24□□□□□ -0.45
HPS4-212ENST00000481910 MAFFQ9ULX9 164 aa12.24□□□□□ -0.45
HPS4-212ENST00000481910 PCDHGC3Q9UN70 934 aa12.24□□□□□ -0.45
HPS4-212ENST00000481910 JRKLQ9Y4A0 524 aa12.24□□□□□ -0.45
HPS4-212ENST00000481910 SMAPO00193 183 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 BEST1O76090 585 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 SEC24AO95486 1093 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 CHRNB2P17787 502 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 TUFMP49411 452 aaKnown RBP12.23□□□□□ -0.45
HPS4-212ENST00000481910 MAP3K7CLP57077 242 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 FMO1Q01740 532 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 ADGRE1Q14246 886 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 MEA1Q16626 185 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 DUSP6Q16828 381 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 VSTM1Q6UX27 236 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 Q7L0L9 218 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 VPS36Q86VN1 386 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 TTC30AQ86WT1 665 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 PASD1Q8IV76 773 aa12.23□□□□□ -0.45
HPS4-212ENST00000481910 SCN4BQ8IWT1 228 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms