RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 KREMEN1Q96MU8 473 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 IMPG2Q9BZV3 1241 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 SMOC2Q9H3U7 446 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 CYP3A43Q9HB55 503 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 IL21Q9HBE4 155 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 CISHQ9NSE2 258 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 HSFX1Q9UBD0 423 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 ANKRD11Q6UB99 2663 aaPredicted RBP11.26□□□□□ -0.61
SSBP1-210ENST00000481508 COL4A3Q01955 1670 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 OTOGLQ3ZCN5 2332 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 RNF225M0QZC1 329 aaPredicted RBP11.25□□□□□ -0.61
SSBP1-210ENST00000481508 P4HA2O15460 535 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 TADA3O75528 432 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 BEST1O76090 585 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 ASGR2P07307 311 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 MYL4P12829 197 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 P4HA1P13674 534 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 ZNF18P17022 549 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 PTPN2P17706 415 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 ACO1P21399 889 aaKnown RBP11.25□□□□□ -0.61
SSBP1-210ENST00000481508 GBP2P32456 591 aaPredicted RBP11.25□□□□□ -0.61
SSBP1-210ENST00000481508 MAGEA11P43364 429 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 ALDH1A3P47895 512 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 RAD23BP54727 409 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 EPHB3P54753 998 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 EPHA5P54756 1037 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 MYL5Q02045 173 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 SMARCB1Q12824 385 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 PLD1Q13393 1074 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 MAN2A1Q16706 1144 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 TCP11X2Q5H9J9 407 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 WDR44Q5JSH3 913 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 STXBP5Q5T5C0 1151 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 GAREM2Q75VX8 874 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 RTL10Q7L3V2 364 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 TMEM150AQ86TG1 271 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 DHX40Q8IX18 779 aaKnown RBP11.25□□□□□ -0.61
SSBP1-210ENST00000481508 CRYBG2Q8N1P7 616 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 SLC4A11Q8NBS3 891 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 ZMIZ2Q8NF64 920 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 RSAD2Q8WXG1 361 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 FGF13Q92913 245 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 PSMG2Q969U7 264 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 FUBP3Q96I24 572 aaKnown RBP eCLIP11.25□□□□□ -0.61
SSBP1-210ENST00000481508 ZNF512Q96ME7 567 aaPredicted RBP11.25□□□□□ -0.61
SSBP1-210ENST00000481508 NT5C1BQ96P26 610 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 PRRX2Q99811 253 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 TUBGCP2Q9BSJ2 902 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 ABCB6Q9NP58 842 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 SIX2Q9NPC8 291 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 GCNT4Q9P109 453 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 MAGEC2Q9UBF1 373 aaPredicted RBP11.25□□□□□ -0.61
SSBP1-210ENST00000481508 NCANO14594 1321 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 KIF26AQ9ULI4 1882 aaPredicted RBP11.25□□□□□ -0.61
SSBP1-210ENST00000481508 FAM208BQ5VWN6 2430 aa11.25□□□□□ -0.61
SSBP1-210ENST00000481508 FASNP49327 2511 aaKnown RBP11.25□□□□□ -0.61
SSBP1-210ENST00000481508 COL4A2P08572 1712 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 SLC38A8A6NNN8 435 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 F8VP50 259 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 PRKCSHP14314 528 aaPredicted RBP11.24□□□□□ -0.61
SSBP1-210ENST00000481508 ADORA2BP29275 332 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 TUFMP49411 452 aaKnown RBP11.24□□□□□ -0.61
SSBP1-210ENST00000481508 USP46P62068 366 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 ZXDAP98168 799 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 CYP4F8P98187 520 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 KCNMA1Q12791 1236 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 IQCB1Q15051 598 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 KRT31Q15323 416 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 TEAD2Q15562 447 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 ZSCAN23Q3MJ62 389 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 VWA3BQ502W6 1294 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 TRIM65Q6PJ69 517 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 C4orf50Q6ZRC1 276 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 PDZD4Q76G19 769 aaPredicted RBP11.24□□□□□ -0.61
SSBP1-210ENST00000481508 APTXQ7Z2E3 356 aaKnown RBP11.24□□□□□ -0.61
SSBP1-210ENST00000481508 UNC93AQ86WB7 457 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 FAM114A1Q8IWE2 563 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 CCDC150Q8NCX0 1101 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 FAM200AQ8TCP9 573 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 SLC2A14Q8TDB8 520 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 MCRS1Q96EZ8 462 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 ZSWIM3Q96MP5 696 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 KCNK16Q96T55 309 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 SMOQ99835 787 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 ZSWIM1Q9BR11 485 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 RPP25Q9BUL9 199 aaKnown RBP11.24□□□□□ -0.61
SSBP1-210ENST00000481508 NT5C1AQ9BXI3 368 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 AVENQ9NQS1 362 aaPredicted RBP11.24□□□□□ -0.61
SSBP1-210ENST00000481508 ASAH2Q9NR71 780 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 EPS15L1Q9UBC2 864 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 LIMD1Q9UGP4 676 aa11.24□□□□□ -0.61
SSBP1-210ENST00000481508 MRPS23Q9Y3D9 190 aaKnown RBP11.24□□□□□ -0.61
SSBP1-210ENST00000481508 A0A1W2PRU2 124 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 PROB1E7EW31 1015 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 NOL4O94818 638 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 F11P03951 625 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 LAMP2P13473 410 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 ATP1A3P13637 1013 aa11.23□□□□□ -0.61
SSBP1-210ENST00000481508 EEF1GP26641 437 aaKnown RBP11.23□□□□□ -0.61
SSBP1-210ENST00000481508 PON1P27169 355 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms