RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 FAM122AQ96E09 287 aa13.86□□□□□ -0.19
HDAC1-207ENST00000481281 SMARCD1Q96GM5 515 aa13.86□□□□□ -0.19
HDAC1-207ENST00000481281 TWNKQ96RR1 684 aa13.86□□□□□ -0.19
HDAC1-207ENST00000481281 FOXQ1Q9C009 403 aa13.86□□□□□ -0.19
HDAC1-207ENST00000481281 SMG9Q9H0W8 520 aaKnown RBP13.86□□□□□ -0.19
HDAC1-207ENST00000481281 KIF9Q9HAQ2 790 aa13.86□□□□□ -0.19
HDAC1-207ENST00000481281 METTL14Q9HCE5 456 aaKnown RBP13.86□□□□□ -0.19
HDAC1-207ENST00000481281 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.86□□□□□ -0.197e-7■■■■□ 25.7
HDAC1-207ENST00000481281 EHD2Q9NZN4 543 aa13.86□□□□□ -0.19
HDAC1-207ENST00000481281 DLGAP2Q9P1A6 1054 aa13.86□□□□□ -0.19
HDAC1-207ENST00000481281 KIAA1468Q9P260 1216 aa13.86□□□□□ -0.19
HDAC1-207ENST00000481281 CTNND2Q9UQB3 1225 aa13.86□□□□□ -0.19
HDAC1-207ENST00000481281 SIT1Q9Y3P8 196 aa13.86□□□□□ -0.19
HDAC1-207ENST00000481281 MYH10P35580 1976 aa13.85□□□□□ -0.19
HDAC1-207ENST00000481281 WDFY4Q6ZS81 3184 aa13.85□□□□□ -0.19
HDAC1-207ENST00000481281 F5P12259 2224 aa13.85□□□□□ -0.19
HDAC1-207ENST00000481281 STK25O00506 426 aa13.85□□□□□ -0.19
HDAC1-207ENST00000481281 CILPO75339 1184 aa13.85□□□□□ -0.19
HDAC1-207ENST00000481281 AVPR1AP37288 418 aa13.85□□□□□ -0.19
HDAC1-207ENST00000481281 MLLT6P55198 1093 aaPredicted RBP13.85□□□□□ -0.19
HDAC1-207ENST00000481281 NHLH1Q02575 133 aa13.85□□□□□ -0.19
HDAC1-207ENST00000481281 PAK1Q13153 545 aa13.85□□□□□ -0.19
HDAC1-207ENST00000481281 ORC1Q13415 861 aa13.85□□□□□ -0.19
HDAC1-207ENST00000481281 ZNF268Q14587 947 aaPredicted RBP13.85□□□□□ -0.19
HDAC1-207ENST00000481281 CAMK4Q16566 473 aa13.85□□□□□ -0.19
HDAC1-207ENST00000481281 ARHGAP29Q52LW3 1261 aa13.85□□□□□ -0.19
HDAC1-207ENST00000481281 YAF2Q8IY57 180 aa13.85□□□□□ -0.19
HDAC1-207ENST00000481281 WHAMMQ8TF30 809 aa13.85□□□□□ -0.19
HDAC1-207ENST00000481281 SLC22A12Q96S37 553 aa13.85□□□□□ -0.19
HDAC1-207ENST00000481281 KCNK16Q96T55 309 aa13.85□□□□□ -0.19
HDAC1-207ENST00000481281 NT5C1AQ9BXI3 368 aa13.85□□□□□ -0.19
HDAC1-207ENST00000481281 OSBPL6Q9BZF3 934 aa13.85□□□□□ -0.19
HDAC1-207ENST00000481281 FAM124BQ9H5Z6 455 aaPredicted RBP13.85□□□□□ -0.19
HDAC1-207ENST00000481281 LTB4R2Q9NPC1 389 aa13.85□□□□□ -0.19
HDAC1-207ENST00000481281 DMAP1Q9NPF5 467 aaPredicted RBP13.85□□□□□ -0.19
HDAC1-207ENST00000481281 KRT82Q9NSB4 513 aa13.85□□□□□ -0.19
HDAC1-207ENST00000481281 TDP1Q9NUW8 608 aa13.85□□□□□ -0.19
HDAC1-207ENST00000481281 GCNT4Q9P109 453 aa13.85□□□□□ -0.19
HDAC1-207ENST00000481281 CCL26Q9Y258 94 aa13.85□□□□□ -0.19
HDAC1-207ENST00000481281 TNFRSF10BO14763 440 aa13.84□□□□□ -0.19
HDAC1-207ENST00000481281 CCDC130P13994 396 aa13.84□□□□□ -0.19
HDAC1-207ENST00000481281 GLULP15104 373 aa13.84□□□□□ -0.19
HDAC1-207ENST00000481281 PFKLP17858 780 aa13.84□□□□□ -0.19
HDAC1-207ENST00000481281 PPP3CCP48454 512 aa13.84□□□□□ -0.19
HDAC1-207ENST00000481281 MARSP56192 900 aaKnown RBP13.84□□□□□ -0.19
HDAC1-207ENST00000481281 PLCB2Q00722 1185 aa13.84□□□□□ -0.19
HDAC1-207ENST00000481281 ZNF687Q8N1G0 1237 aa13.84□□□□□ -0.19
HDAC1-207ENST00000481281 TTC39CQ8N584 583 aa13.84□□□□□ -0.19
HDAC1-207ENST00000481281 C12orf29Q8N999 325 aa13.84□□□□□ -0.19
HDAC1-207ENST00000481281 DTWD2Q8NBA8 298 aa13.84□□□□□ -0.19
HDAC1-207ENST00000481281 ZMIZ2Q8NF64 920 aa13.84□□□□□ -0.19
HDAC1-207ENST00000481281 RIN3Q8TB24 985 aa13.84□□□□□ -0.19
HDAC1-207ENST00000481281 SLC2A14Q8TDB8 520 aa13.84□□□□□ -0.19
HDAC1-207ENST00000481281 NELL2Q99435 816 aa13.84□□□□□ -0.19
HDAC1-207ENST00000481281 ARID3AQ99856 593 aa13.84□□□□□ -0.19
HDAC1-207ENST00000481281 MED10Q9BTT4 135 aa13.84□□□□□ -0.19
HDAC1-207ENST00000481281 CLSTN2Q9H4D0 955 aa13.84□□□□□ -0.19
HDAC1-207ENST00000481281 CSNK1G1Q9HCP0 422 aa13.84□□□□□ -0.19
HDAC1-207ENST00000481281 FAM49BQ9NUQ9 324 aa13.84□□□□□ -0.19
HDAC1-207ENST00000481281 IL37Q9NZH6 218 aa13.84□□□□□ -0.19
HDAC1-207ENST00000481281 PIAS3Q9Y6X2 628 aa13.84□□□□□ -0.19
HDAC1-207ENST00000481281 MYO16Q9Y6X6 1858 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 TRAV19A0A0A6YYK7 116 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 FAM92AA1XBS5 289 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 C2orf78A6NCI8 922 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 ZNF840PA6NDX5 716 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 MAN2B1O00754 1011 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 PMM2O15305 246 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 AP1G2O75843 785 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 RTN3O95197 1032 aaPredicted RBP13.83□□□□□ -0.2
HDAC1-207ENST00000481281 OLFM2O95897 454 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 DCNP07585 359 aaKnown RBP13.83□□□□□ -0.2
HDAC1-207ENST00000481281 USP17L7P0C7H9 530 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 CD58P19256 250 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 TRIM21P19474 475 aaKnown RBP13.83□□□□□ -0.2
HDAC1-207ENST00000481281 CD72P21854 359 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 TARSP26639 723 aaKnown RBP13.83□□□□□ -0.2
HDAC1-207ENST00000481281 FMO5P49326 533 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 STX17P56962 302 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 TAF10Q12962 218 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 USP4Q13107 963 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 UBXN2BQ14CS0 331 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 CCDC40Q4G0X9 1142 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 WDR44Q5JSH3 913 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 ZNF852Q6ZMS4 543 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 TRIM59Q8IWR1 403 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 NUP93Q8N1F7 819 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 TATDN2Q93075 761 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 MSANTD3Q96H12 275 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 ZFYVE19Q96K21 471 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 SLITRK1Q96PX8 696 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 HNRNPABQ99729 332 aaKnown RBP13.83□□□□□ -0.2
HDAC1-207ENST00000481281 SMOQ99835 787 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 FAM83CQ9BQN1 747 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 IRF2BPLQ9H1B7 796 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 TRPC7Q9HCX4 862 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 CISHQ9NSE2 258 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 TRPM5Q9NZQ8 1165 aa13.83□□□□□ -0.2
HDAC1-207ENST00000481281 MRPS17Q9Y2R5 130 aaKnown RBP13.83□□□□□ -0.2
HDAC1-207ENST00000481281 MTF2Q9Y483 593 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms