RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 EEF2KMTQ96G04 330 aa18.09■□□□□ 0.49
HSPG2-209ENST00000480900 PHOX2BQ99453 314 aa18.09■□□□□ 0.49
HSPG2-209ENST00000480900 NIF3L1Q9GZT8 377 aa18.09■□□□□ 0.49
HSPG2-209ENST00000480900 SMG9Q9H0W8 520 aaKnown RBP18.09■□□□□ 0.49
HSPG2-209ENST00000480900 MMRN2Q9H8L6 949 aa18.09■□□□□ 0.49
HSPG2-209ENST00000480900 CYP3A43Q9HB55 503 aa18.09■□□□□ 0.49
HSPG2-209ENST00000480900 TMEM30AQ9NV96 361 aa18.09■□□□□ 0.49
HSPG2-209ENST00000480900 FAM86C1Q9NVL1 165 aa18.09■□□□□ 0.49
HSPG2-209ENST00000480900 THG1LQ9NWX6 298 aaKnown RBP18.09■□□□□ 0.49
HSPG2-209ENST00000480900 MAN1B1Q9UKM7 699 aa18.09■□□□□ 0.49
HSPG2-209ENST00000480900 TRAV19A0A0A6YYK7 116 aa18.08■□□□□ 0.48
HSPG2-209ENST00000480900 CLDN5O00501 218 aa18.08■□□□□ 0.48
HSPG2-209ENST00000480900 PFKLP17858 780 aa18.08■□□□□ 0.48
HSPG2-209ENST00000480900 CCNE1P24864 410 aa18.08■□□□□ 0.48
HSPG2-209ENST00000480900 RPS9P46781 194 aaKnown RBP18.08■□□□□ 0.48
HSPG2-209ENST00000480900 PPP3CCP48454 512 aa18.08■□□□□ 0.48
HSPG2-209ENST00000480900 MRE11P49959 708 aa18.08■□□□□ 0.48
HSPG2-209ENST00000480900 MXI1P50539 228 aa18.08■□□□□ 0.48
HSPG2-209ENST00000480900 NDST1P52848 882 aa18.08■□□□□ 0.48
HSPG2-209ENST00000480900 CACNA2D1P54289 1103 aa18.08■□□□□ 0.48
HSPG2-209ENST00000480900 USP46P62068 366 aa18.08■□□□□ 0.48
HSPG2-209ENST00000480900 INCA1Q0VD86 236 aa18.08■□□□□ 0.48
HSPG2-209ENST00000480900 ACOT1Q86TX2 421 aa18.08■□□□□ 0.48
HSPG2-209ENST00000480900 FAM35AQ86V20 835 aa18.08■□□□□ 0.48
HSPG2-209ENST00000480900 ZNF687Q8N1G0 1237 aa18.08■□□□□ 0.48
HSPG2-209ENST00000480900 CRYBG2Q8N1P7 616 aa18.08■□□□□ 0.48
HSPG2-209ENST00000480900 DHTKD1Q96HY7 919 aaPredicted RBP18.08■□□□□ 0.48
HSPG2-209ENST00000480900 C8orf33Q9H7E9 229 aaPredicted RBP18.08■□□□□ 0.48
HSPG2-209ENST00000480900 APOBEC3GQ9HC16 384 aaKnown RBP18.08■□□□□ 0.48
HSPG2-209ENST00000480900 TRPC7Q9HCX4 862 aa18.08■□□□□ 0.48
HSPG2-209ENST00000480900 CCL26Q9Y258 94 aa18.08■□□□□ 0.48
HSPG2-209ENST00000480900 ATG2BQ96BY7 2078 aa18.08■□□□□ 0.48
HSPG2-209ENST00000480900 TRIM49BA6NDI0 452 aa18.07■□□□□ 0.48
HSPG2-209ENST00000480900 USP17L7P0C7H9 530 aa18.07■□□□□ 0.48
HSPG2-209ENST00000480900 TRIM21P19474 475 aaKnown RBP18.07■□□□□ 0.48
HSPG2-209ENST00000480900 NBL1P41271 181 aa18.07■□□□□ 0.48
HSPG2-209ENST00000480900 PDE6CP51160 858 aa18.07■□□□□ 0.48
HSPG2-209ENST00000480900 PAQR9Q6ZVX9 377 aa18.07■□□□□ 0.48
HSPG2-209ENST00000480900 ALYREFQ86V81 257 aaKnown RBP18.07■□□□□ 0.48
HSPG2-209ENST00000480900 C1orf210Q8IVY1 113 aa18.07■□□□□ 0.48
HSPG2-209ENST00000480900 FBXL13Q8NEE6 735 aa18.07■□□□□ 0.48
HSPG2-209ENST00000480900 FAM3CQ92520 227 aa18.07■□□□□ 0.48
HSPG2-209ENST00000480900 SMARCD1Q96GM5 515 aa18.07■□□□□ 0.48
HSPG2-209ENST00000480900 FAXDC2Q96IV6 333 aa18.07■□□□□ 0.48
HSPG2-209ENST00000480900 ZFYVE19Q96K21 471 aa18.07■□□□□ 0.48
HSPG2-209ENST00000480900 MED10Q9BTT4 135 aa18.07■□□□□ 0.48
HSPG2-209ENST00000480900 DMAP1Q9NPF5 467 aaPredicted RBP18.07■□□□□ 0.48
HSPG2-209ENST00000480900 TRPM5Q9NZQ8 1165 aa18.07■□□□□ 0.48
HSPG2-209ENST00000480900 GCNT4Q9P109 453 aa18.07■□□□□ 0.48
HSPG2-209ENST00000480900 HMGXB4Q9UGU5 601 aa18.07■□□□□ 0.48
HSPG2-209ENST00000480900 C2orf78A6NCI8 922 aa18.06■□□□□ 0.48
HSPG2-209ENST00000480900 PROB1E7EW31 1015 aa18.06■□□□□ 0.48
HSPG2-209ENST00000480900 RTN3O95197 1032 aaPredicted RBP18.06■□□□□ 0.48
HSPG2-209ENST00000480900 CKMP06732 381 aa18.06■□□□□ 0.48
HSPG2-209ENST00000480900 CD44P16070 742 aaKnown RBP18.06■□□□□ 0.48
HSPG2-209ENST00000480900 ANP32AP39687 249 aaKnown RBP18.06■□□□□ 0.48
HSPG2-209ENST00000480900 KPNA1P52294 538 aaPredicted RBP18.06■□□□□ 0.48
HSPG2-209ENST00000480900 UBE2HP62256 183 aa18.06■□□□□ 0.48
HSPG2-209ENST00000480900 MORC3Q14149 939 aa18.06■□□□□ 0.48
HSPG2-209ENST00000480900 FOXR2Q6PJQ5 311 aa18.06■□□□□ 0.48
HSPG2-209ENST00000480900 RALGPS2Q86X27 583 aaPredicted RBP18.06■□□□□ 0.48
HSPG2-209ENST00000480900 FUKQ8N0W3 1084 aa18.06■□□□□ 0.48
HSPG2-209ENST00000480900 SLITRK1Q96PX8 696 aa18.06■□□□□ 0.48
HSPG2-209ENST00000480900 SLC22A12Q96S37 553 aa18.06■□□□□ 0.48
HSPG2-209ENST00000480900 FAM83CQ9BQN1 747 aa18.06■□□□□ 0.48
HSPG2-209ENST00000480900 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.06■□□□□ 0.488e-8■■■■□ 25.6
HSPG2-209ENST00000480900 GTSE1Q9NYZ3 720 aa18.06■□□□□ 0.48
HSPG2-209ENST00000480900 NDRG2Q9UN36 371 aaKnown RBP18.06■□□□□ 0.48
HSPG2-209ENST00000480900 EP300Q09472 2414 aaPredicted RBP18.06■□□□□ 0.48
HSPG2-209ENST00000480900 MYOFQ9NZM1 2061 aa18.05■□□□□ 0.48
HSPG2-209ENST00000480900 ZNF840PA6NDX5 716 aa18.05■□□□□ 0.48
HSPG2-209ENST00000480900 AP1G2O75843 785 aa18.05■□□□□ 0.48
HSPG2-209ENST00000480900 BMP6P22004 513 aa18.05■□□□□ 0.48
HSPG2-209ENST00000480900 CTHP32929 405 aa18.05■□□□□ 0.48
HSPG2-209ENST00000480900 USP4Q13107 963 aa18.05■□□□□ 0.48
HSPG2-209ENST00000480900 FZD5Q13467 585 aa18.05■□□□□ 0.48
HSPG2-209ENST00000480900 ITPRIPL2Q3MIP1 535 aa18.05■□□□□ 0.48
HSPG2-209ENST00000480900 DCAF17Q5H9S7 520 aaPredicted RBP18.05■□□□□ 0.48
HSPG2-209ENST00000480900 TCERG1LQ5VWI1 586 aa18.05■□□□□ 0.48
HSPG2-209ENST00000480900 ISM2Q6H9L7 571 aa18.05■□□□□ 0.48
HSPG2-209ENST00000480900 CC2D1AQ6P1N0 951 aaPredicted RBP18.05■□□□□ 0.48
HSPG2-209ENST00000480900 NUP93Q8N1F7 819 aa18.05■□□□□ 0.48
HSPG2-209ENST00000480900 ARL14EPQ8N8R7 260 aaPredicted RBP18.05■□□□□ 0.48
HSPG2-209ENST00000480900 SEMA4DQ92854 862 aa18.05■□□□□ 0.48
HSPG2-209ENST00000480900 CEP63Q96MT8 703 aa18.05■□□□□ 0.48
HSPG2-209ENST00000480900 CYP2S1Q96SQ9 504 aa18.05■□□□□ 0.48
HSPG2-209ENST00000480900 KCNK16Q96T55 309 aa18.05■□□□□ 0.48
HSPG2-209ENST00000480900 NT5C1AQ9BXI3 368 aa18.05■□□□□ 0.48
HSPG2-209ENST00000480900 DNAI2Q9GZS0 605 aa18.05■□□□□ 0.48
HSPG2-209ENST00000480900 FAM124BQ9H5Z6 455 aaPredicted RBP18.05■□□□□ 0.48
HSPG2-209ENST00000480900 GKN1Q9NS71 199 aa18.05■□□□□ 0.48
HSPG2-209ENST00000480900 KRT82Q9NSB4 513 aa18.05■□□□□ 0.48
HSPG2-209ENST00000480900 RAB20Q9NX57 234 aa18.05■□□□□ 0.48
HSPG2-209ENST00000480900 ARMCX3Q9UH62 379 aaPredicted RBP18.05■□□□□ 0.48
HSPG2-209ENST00000480900 SPECC1L-ADORA2AF8WAN1 911 aa18.04■□□□□ 0.48
HSPG2-209ENST00000480900 CILPO75339 1184 aa18.04■□□□□ 0.48
HSPG2-209ENST00000480900 CCDC130P13994 396 aa18.04■□□□□ 0.48
HSPG2-209ENST00000480900 TCF3P15923 654 aa18.04■□□□□ 0.48
HSPG2-209ENST00000480900 HDCP19113 662 aa18.04■□□□□ 0.48
HSPG2-209ENST00000480900 YWHAQP27348 245 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms