RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 GREB1Q4ZG55 1949 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 A8MXQ7 604 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 ATP2C2O75185 946 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 CPB1P15086 417 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 ATF2P15336 505 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 PTPN2P17706 415 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 WARSP23381 471 aaKnown RBP9.65□□□□□ -0.86
VCP-206ENST00000480327 HOXC13P31276 330 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 GNL1P36915 607 aaPredicted RBP9.65□□□□□ -0.86
VCP-206ENST00000480327 RPS9P46781 194 aaKnown RBP9.65□□□□□ -0.86
VCP-206ENST00000480327 KLK7P49862 253 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 PSMC1P62191 440 aaKnown RBP9.65□□□□□ -0.86
VCP-206ENST00000480327 PFKPQ01813 784 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 MTAPQ13126 283 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 GRM2Q14416 872 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 PUM1Q14671 1186 aaKnown RBP eCLIP9.65□□□□□ -0.86
VCP-206ENST00000480327 CCDC142Q17RM4 750 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 FKBP15Q5T1M5 1219 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 GJB7Q6PEY0 223 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 RRAGAQ7L523 313 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 DPH6Q7L8W6 267 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 TCEAL8Q8IYN2 117 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 TMEM86AQ8N2M4 240 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 PPM1KQ8N3J5 372 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 KAT5Q92993 513 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 RSPRY1Q96DX4 576 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 ASB16Q96NS5 453 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 NT5C1BQ96P26 610 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 PGLYRP2Q96PD5 576 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 HINFPQ9BQA5 517 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 CORO1BQ9BR76 489 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 EPC1Q9H2F5 836 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 GDE1Q9NZC3 331 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 CEP72Q9P209 647 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 HMGXB4Q9UGU5 601 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 NME7Q9Y5B8 376 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 PCDHGA2Q9Y5H1 932 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 INSL5Q9Y5Q6 135 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 SPAG17Q6Q759 2223 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 MAP1BP46821 2468 aaKnown RBP9.65□□□□□ -0.86
VCP-206ENST00000480327 CHD8Q9HCK8 2581 aa9.65□□□□□ -0.87
VCP-206ENST00000480327 ACACBO00763 2458 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 OR6C75A6NL08 312 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 ARNTLO00327 626 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 PMM2O15305 246 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 TACC1O75410 805 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 SERPINC1P01008 464 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 GJA1P17302 382 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 PON1P27169 355 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 VIPR2P41587 438 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 LHX1P48742 406 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 NDST1P52848 882 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 FANCCQ00597 558 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 UBXN1Q04323 297 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 KCNMA1Q12791 1236 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 CUL2Q13617 745 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 GAS6Q14393 721 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 EXOC3L4Q17RC7 722 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 SLC39A12Q504Y0 691 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 ZNF394Q53GI3 561 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 TRIM65Q6PJ69 517 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 VITQ6UXI7 678 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 RNF19BQ6ZMZ0 732 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 APTXQ7Z2E3 356 aaKnown RBP9.64□□□□□ -0.87
VCP-206ENST00000480327 LIMS2Q7Z4I7 341 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 LRRTM3Q86VH5 581 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 GAS2L3Q86XJ1 694 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 DNASE1L2Q92874 299 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 PCMTD1Q96MG8 357 aaPredicted RBP9.64□□□□□ -0.87
VCP-206ENST00000480327 NAP1L5Q96NT1 182 aaPredicted RBP9.64□□□□□ -0.87
VCP-206ENST00000480327 SYT15Q9BQS2 421 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 LSM14BQ9BX40 385 aaKnown RBP9.64□□□□□ -0.87
VCP-206ENST00000480327 LRRC3Q9BY71 257 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 CRISPLD1Q9H336 500 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 DPEP3Q9H4B8 488 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 UBE2TQ9NPD8 197 aaPredicted RBP9.64□□□□□ -0.87
VCP-206ENST00000480327 TMLHEQ9NVH6 421 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 ZSCAN32Q9NX65 697 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 GTF3C4Q9UKN8 822 aa9.64□□□□□ -0.87
VCP-206ENST00000480327 SMG5Q9UPR3 1016 aaKnown RBP9.64□□□□□ -0.87
VCP-206ENST00000480327 USP24Q9UPU5 2620 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 MYBPHLA2RUH7 354 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 GTPBP10A4D1E9 387 aaKnown RBP9.63□□□□□ -0.87
VCP-206ENST00000480327 LGALS16A8MUM7 142 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 GABRDO14764 452 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 TEX33O43247 280 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 MICAL2O94851 1124 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 LRG1P02750 347 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 PCSK1P29120 753 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 MAGEA9P43362 315 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 ATXN1P54253 815 aaKnown RBP9.63□□□□□ -0.87
VCP-206ENST00000480327 EPHA5P54756 1037 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 PLCB2Q00722 1185 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 TSPY1Q01534 308 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 ADCY1Q08828 1119 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 DMWDQ09019 674 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 SYCP1Q15431 976 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 ARHGAP44Q17R89 818 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 FILIP1LQ4L180 1135 aa9.63□□□□□ -0.87
VCP-206ENST00000480327 MDH1BQ5I0G3 518 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms