RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 MAGEC2Q9UBF1 373 aaPredicted RBP7.58□□□□□ -1.2
COL17A1-205ENST00000480127 CFAP45Q9UL16 551 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 INVSQ9Y283 1065 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 TSC2P49815 1807 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 ATP8B3O60423 1300 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 ANO9A1A5B4 782 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 ANTXRLA6NF34 631 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 CLIC2O15247 247 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 POLR2DO15514 142 aaKnown RBP7.57□□□□□ -1.2
COL17A1-205ENST00000480127 CUTAO60888 179 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 PDGFRBP09619 1106 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 USP17L7P0C7H9 530 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 BCKDHBP21953 392 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 CYP2F1P24903 491 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 GBP1P32455 592 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 AFMP43652 599 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 CASP5P51878 434 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 DGKEP52429 567 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 PSMC1P62191 440 aaKnown RBP7.57□□□□□ -1.2
COL17A1-205ENST00000480127 IRX4P78413 519 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 POU5F1Q01860 360 aaKnown RBP7.57□□□□□ -1.2
COL17A1-205ENST00000480127 RING1Q06587 406 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 ZNF268Q14587 947 aaPredicted RBP7.57□□□□□ -1.2
COL17A1-205ENST00000480127 PDGFRLQ15198 375 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 DDR2Q16832 855 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 INTS6LQ5JSJ4 861 aaKnown RBP7.57□□□□□ -1.2
COL17A1-205ENST00000480127 LRSAM1Q6UWE0 723 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 MON1AQ86VX9 555 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 RASSF3Q86WH2 238 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 C1orf127Q8N9H9 656 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 STKLD1Q8NE28 680 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 OR6B3Q8NGW1 331 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 KCNN1Q92952 543 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 CD101Q93033 1021 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 CCDC34Q96HJ3 373 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 SYT15Q9BQS2 421 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 ACBD6Q9BR61 282 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 ECT2Q9H8V3 914 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 KIF9Q9HAQ2 790 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 MAGEF1Q9HAY2 307 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 TMEM9BQ9NQ34 198 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 HSPBP1Q9NZL4 362 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 NXF1Q9UBU9 619 aaKnown RBP7.57□□□□□ -1.2
COL17A1-205ENST00000480127 GTF3C4Q9UKN8 822 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 L1RE1Q9UN81 338 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 MTMR6Q9Y217 621 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 STYXL1Q9Y6J8 313 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 ZFYVE26Q68DK2 2539 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 IGF2RP11717 2491 aa7.57□□□□□ -1.2
COL17A1-205ENST00000480127 ZZEF1O43149 2961 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 TCHHQ07283 1943 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 SPEGQ15772 3267 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 SOBPA7XYQ1 873 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 EIF3DO15371 548 aaKnown RBP eCLIP7.56□□□□□ -1.2
COL17A1-205ENST00000480127 TADA3O75528 432 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 YEATS4O95619 227 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 P4HA1P13674 534 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 ADSSP30520 456 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 GNL1P36915 607 aaPredicted RBP7.56□□□□□ -1.2
COL17A1-205ENST00000480127 GPR15P49685 360 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 MTF1Q14872 753 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 ZNF77Q15935 545 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 SNRNP35Q16560 246 aaKnown RBP7.56□□□□□ -1.2
COL17A1-205ENST00000480127 UAP1L1Q3KQV9 507 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 WDR72Q3MJ13 1102 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 USP39Q53GS9 565 aaKnown RBP7.56□□□□□ -1.2
COL17A1-205ENST00000480127 MDH1BQ5I0G3 518 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 KIAA1211LQ6NV74 962 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 CYP2U1Q7Z449 544 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 C11orf74Q86VG3 221 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 WDR49Q8IV35 697 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 TOP6BLQ8N6T0 577 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 XXYLT1Q8NBI6 393 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 LINC00301Q8NCQ3 95 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 CCDC150Q8NCX0 1101 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 DEFB124Q8NES8 71 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 CCDC26Q8TAB7 109 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 GOLGA5Q8TBA6 731 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 LRRC15Q8TF66 581 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 OSCP1Q8WVF1 389 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 ZCCHC14Q8WYQ9 949 aaKnown RBP7.56□□□□□ -1.2
COL17A1-205ENST00000480127 ATP2A3Q93084 1043 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 HPS3Q969F9 1004 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 ACDQ96AP0 544 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 DNAJC19Q96DA6 116 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 SLITRK1Q96PX8 696 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 SLC22A12Q96S37 553 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 BACH2Q9BYV9 841 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 TPSD1Q9BZJ3 242 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 IMPG2Q9BZV3 1241 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 BLZF1Q9H2G9 400 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 ABCB6Q9NP58 842 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 SLC39A2Q9NP94 309 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 TMLHEQ9NVH6 421 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 INTS13Q9NVM9 706 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 DUS2Q9NX74 493 aaKnown RBP7.56□□□□□ -1.2
COL17A1-205ENST00000480127 TRPM5Q9NZQ8 1165 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 LHX6Q9UPM6 363 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 NEUROG3Q9Y4Z2 214 aa7.56□□□□□ -1.2
COL17A1-205ENST00000480127 UBE4BO95155 1302 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms