RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 TLE6Q9H808 572 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 MRPL44Q9H9J2 332 aaKnown RBP5.31□□□□□ -1.56
PTCD3-213ENST00000480102 ALG13Q9NP73 1137 aaKnown RBP5.31□□□□□ -1.56
PTCD3-213ENST00000480102 C1GALT1Q9NS00 363 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 SNTG2Q9NY99 539 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 CLEC1BQ9P126 229 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 MTRRQ9UBK8 725 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 ZMYM5Q9UJ78 669 aa5.31□□□□□ -1.56
PTCD3-213ENST00000480102 ZFP37Q9Y6Q3 630 aaPredicted RBP5.31□□□□□ -1.56
PTCD3-213ENST00000480102 FAM170BA6NMN3 283 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 K7ENM7 598 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 RFXAPO00287 272 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 PIRO00625 290 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 PDXKO00764 312 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 POLR2DO15514 142 aaKnown RBP5.3□□□□□ -1.56
PTCD3-213ENST00000480102 EXTL3O43909 919 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 B4GALT3O60512 393 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 TADA2AO75478 443 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 GLP2RO95838 553 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 SSBP05455 408 aaKnown RBP eCLIP5.3□□□□□ -1.56
PTCD3-213ENST00000480102 FOSL1P15407 271 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 MTHFRP42898 656 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 CLCN4P51793 760 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 ZP2Q05996 745 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 PKP1Q13835 747 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 KNOP1Q1ED39 458 aaKnown RBP5.3□□□□□ -1.56
PTCD3-213ENST00000480102 PAN2Q504Q3 1202 aaKnown RBP5.3□□□□□ -1.56
PTCD3-213ENST00000480102 ZC3H12AQ5D1E8 599 aaKnown RBP5.3□□□□□ -1.56
PTCD3-213ENST00000480102 HERC4Q5GLZ8 1057 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-213ENST00000480102 FAM26FQ5R3K3 315 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 SPOUT1Q5T280 376 aaKnown RBP5.3□□□□□ -1.56
PTCD3-213ENST00000480102 SCARA3Q6AZY7 606 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 KIAA1841Q6NSI8 718 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 ANKRD54Q6NXT1 300 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 LLGL2Q6P1M3 1020 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 SLC39A4Q6P5W5 647 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 MAEAQ7L5Y9 396 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 HS2ST1Q7LGA3 356 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 LIMS2Q7Z4I7 341 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 SPRED2Q7Z698 418 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 GPR149Q86SP6 731 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 USP37Q86T82 979 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 TMEM173Q86WV6 379 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-213ENST00000480102 BRSK2Q8IWQ3 736 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 SMYD4Q8IYR2 804 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-213ENST00000480102 CEP57L1Q8IYX8 460 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 LRRC52Q8N7C0 313 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 KIAA1958Q8N8K9 716 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 LEMD2Q8NC56 503 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 ENGASEQ8NFI3 743 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 BEST2Q8NFU1 509 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-213ENST00000480102 LNX1Q8TBB1 728 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-213ENST00000480102 GRIN3AQ8TCU5 1115 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 MICAL1Q8TDZ2 1067 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 C2orf15Q8WU43 125 aaKnown RBP5.3□□□□□ -1.56
PTCD3-213ENST00000480102 STAMQ92783 540 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 LPPQ93052 612 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 PAGE5Q96GU1 130 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 ZNF668Q96K58 619 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-213ENST00000480102 RIPOR3Q96MK2 946 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 GSDMAQ96QA5 445 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 TCHPQ9BT92 498 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 MSTO1Q9BUK6 570 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 KIFC3Q9BVG8 833 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 PHF7Q9BWX1 381 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-213ENST00000480102 VN1R3Q9BXE9 311 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 KCNH6Q9H252 994 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 SFXN1Q9H9B4 322 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 RPF1Q9H9Y2 349 aaKnown RBP5.3□□□□□ -1.56
PTCD3-213ENST00000480102 CERS4Q9HA82 394 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 ENTPD7Q9NQZ7 604 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 PANK4Q9NVE7 773 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 MIOSQ9NXC5 875 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 DNAJB4Q9UDY4 337 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 PARP2Q9UGN5 583 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 CD207Q9UJ71 328 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 HOOK1Q9UJC3 728 aaKnown RBP5.3□□□□□ -1.56
PTCD3-213ENST00000480102 AGO2Q9UKV8 859 aaKnown RBP5.3□□□□□ -1.56
PTCD3-213ENST00000480102 DSEQ9UL01 958 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 MTUS1Q9ULD2 1270 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 TRAF3IP3Q9Y228 551 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 HCFC2Q9Y5Z7 792 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 AK5Q9Y6K8 562 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 MICAL3Q7RTP6 2002 aa5.3□□□□□ -1.56
PTCD3-213ENST00000480102 A0A087WWV3 80 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 OR6C75A6NL08 312 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 HIDE1A8MVS5 230 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 LOC730098B7Z3J9 87 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 H7C4K7 107 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 IKBKBO14920 756 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 PMM2O15305 246 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 MEFVO15553 781 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-213ENST00000480102 TGFB1I1O43294 461 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 MBTPS2O43462 519 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 CLASP2O75122 1294 aaKnown RBP5.29□□□□□ -1.56
PTCD3-213ENST00000480102 TBX10O75333 385 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 B3GAT3O94766 335 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 ABLIM3O94929 683 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 CXCL14O95715 111 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms