RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 FUT8Q9BYC5 575 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 FRMD8P1Q9BZ68 369 aaPredicted RBP11.58□□□□□ -0.56
VTI1A-204ENST00000480057 OSBPL8Q9BZF1 889 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 FAM129AQ9BZQ8 928 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 EPB41L5Q9HCM4 733 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 FAM114A2Q9NRY5 505 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 FAM53CQ9NYF3 392 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 PCDHB8Q9UN66 801 aa11.58□□□□□ -0.56
VTI1A-204ENST00000480057 UTP11Q9Y3A2 253 aaKnown RBP11.58□□□□□ -0.56
VTI1A-204ENST00000480057 ENPP3O14638 875 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 MAP2K7O14733 419 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 PAPSS1O43252 624 aaPredicted RBP11.57□□□□□ -0.56
VTI1A-204ENST00000480057 RRP9O43818 475 aaKnown RBP11.57□□□□□ -0.56
VTI1A-204ENST00000480057 NBNO60934 754 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 FBXO21O94952 628 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 TJP3O95049 919 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 KRT1P04264 644 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 FAM200BP0CF97 657 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 RARAP10276 462 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 ADORA2BP29275 332 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 COILP38432 576 aaPredicted RBP11.57□□□□□ -0.56
VTI1A-204ENST00000480057 SSR1P43307 286 aaKnown RBP11.57□□□□□ -0.56
VTI1A-204ENST00000480057 PTPN9P43378 593 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 SLC7A5Q01650 507 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 GUCY2DQ02846 1103 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 MTFR1Q15390 333 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 CCNG2Q16589 344 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 TAZQ16635 292 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 ODF2Q5BJF6 829 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 TFDP3Q5H9I0 405 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 EFHC1Q5JVL4 640 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 AADACL2Q6P093 401 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 DRICH1Q6PGQ1 229 aaPredicted RBP11.57□□□□□ -0.56
VTI1A-204ENST00000480057 SLC39A5Q6ZMH5 540 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 COLGALT2Q8IYK4 626 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 THEM5Q8N1Q8 247 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 ANKLE1Q8NAG6 615 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 CMASQ8NFW8 434 aaPredicted RBP11.57□□□□□ -0.56
VTI1A-204ENST00000480057 MYCBPAPQ8TBZ2 947 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 GRK7Q8WTQ7 553 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 MAGOHBQ96A72 148 aaKnown RBP11.57□□□□□ -0.56
VTI1A-204ENST00000480057 SLITRK1Q96PX8 696 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 TBCBQ99426 244 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 ACBD3Q9H3P7 528 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 AMACRQ9UHK6 382 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 INPP5FQ9Y2H2 1132 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 NR2E1Q9Y466 385 aa11.57□□□□□ -0.56
VTI1A-204ENST00000480057 DCDC2CA8MYV0 355 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 ZNF487B1APH4 448 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 TRAPPC3O43617 180 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 GABBR2O75899 941 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 RALAP11233 206 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 PDGFRAP16234 1089 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 TKTP29401 623 aaKnown RBP11.56□□□□□ -0.56
VTI1A-204ENST00000480057 SDC4P31431 198 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 RFC2P35250 354 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 PTGIRP43119 386 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 RGS7P49802 495 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 SMC1AQ14683 1233 aaKnown RBP11.56□□□□□ -0.56
VTI1A-204ENST00000480057 GPNMBQ14956 572 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 PKN2Q16513 984 aaKnown RBP11.56□□□□□ -0.56
VTI1A-204ENST00000480057 MDH1BQ5I0G3 518 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 INTS6LQ5JSJ4 861 aaKnown RBP11.56□□□□□ -0.56
VTI1A-204ENST00000480057 CLLU1OSQ5K130 101 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 FAM171BQ6P995 826 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 CCDC137Q6PK04 289 aaKnown RBP11.56□□□□□ -0.56
VTI1A-204ENST00000480057 SPOCD1Q6ZMY3 1216 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 PAQR9Q6ZVX9 377 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 FAM35AQ86V20 835 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 CCDC50Q8IVM0 306 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 ZDHHC14Q8IZN3 488 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 SCML4Q8N228 414 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 ARFGAP1Q8N6T3 406 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 DBF4BQ8NFT6 615 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 TEKT4Q8WW24 435 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 RXFP2Q8WXD0 754 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 CASKIN2Q8WXE0 1202 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 KHSRPQ92945 711 aaKnown RBP eCLIP11.56□□□□□ -0.56
VTI1A-204ENST00000480057 SMARCD1Q96GM5 515 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 ERP44Q9BS26 406 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 MRPL9Q9BYD2 267 aaKnown RBP11.56□□□□□ -0.56
VTI1A-204ENST00000480057 B3GNT5Q9BYG0 378 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 CSNK1G1Q9HCP0 422 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 PNPLA8Q9NP80 782 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 CRTAC1Q9NQ79 661 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 OGFRQ9NZT2 677 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 PCDHB7Q9Y5E2 793 aa11.56□□□□□ -0.56
VTI1A-204ENST00000480057 hCG_1818297A0A087WSY0 165 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 TULP2O00295 520 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 SYN3O14994 580 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 TTI1O43156 1089 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 HCRTO43612 131 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 HSF2BPO75031 334 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 ATP2C2O75185 946 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 DAB1O75553 588 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 ZMYND10O75800 440 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 ENDOD1O94919 500 aa11.55□□□□□ -0.56
VTI1A-204ENST00000480057 SEC31AO94979 1220 aaKnown RBP11.55□□□□□ -0.56
VTI1A-204ENST00000480057 TRUB2O95900 331 aaKnown RBP11.55□□□□□ -0.56
VTI1A-204ENST00000480057 MIPP30301 263 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms