RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 TNKS2Q9H2K2 1166 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 RLN1P04808 185 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 POLR2EP19388 210 aaKnown RBP9.28□□□□□ -0.92
TTC3-216ENST00000479930 LRRC8DQ7L1W4 858 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 UBE2J2Q8N2K1 259 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 ZNF563Q8TA94 476 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 MYCBPQ99417 103 aaPredicted RBP9.28□□□□□ -0.92
TTC3-216ENST00000479930 MAT2BQ9NZL9 334 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 KIF1BO60333 1816 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 EVPLLA8MZ36 301 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 FAM155AB1AL88 458 aaPredicted RBP9.28□□□□□ -0.92
TTC3-216ENST00000479930 SERPINA3P01011 423 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 CSTBP04080 98 aaKnown RBP9.28□□□□□ -0.92
TTC3-216ENST00000479930 NR1D1P20393 614 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 SPIDRQ14159 915 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 BEND6Q5SZJ8 279 aaPredicted RBP9.28□□□□□ -0.92
TTC3-216ENST00000479930 EFL1Q7Z2Z2 1120 aaKnown RBP9.28□□□□□ -0.92
TTC3-216ENST00000479930 FBXO32Q969P5 355 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 ZNF839A8K0R7 811 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 MAGEB3O15480 346 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 CCNOP22674 350 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 EPS8Q12929 822 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 CYLC2Q14093 348 aaPredicted RBP9.28□□□□□ -0.92
TTC3-216ENST00000479930 GPR158Q5T848 1215 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 C5orf34Q96MH7 638 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 MRPL4Q9BYD3 311 aaKnown RBP9.28□□□□□ -0.92
TTC3-216ENST00000479930 SEMA3GQ9NS98 782 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 ZNF536O15090 1300 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 MGAT4DA6NG13 374 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 PEX12O00623 359 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 MAPK13O15264 365 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 PIP5K1CO60331 668 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 GCP02774 474 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 JMJD7P0C870 316 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 C2orf27AQ580R0 203 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 RAB11FIP2Q7L804 512 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 FAM129CQ86XR2 697 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 DEPDC4Q8N2C3 294 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 ANKRD13CQ8N6S4 541 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 MRFAP1L1Q96HT8 127 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 GPER1Q99527 375 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 IGF2BP3O00425 579 aaKnown RBP eCLIP9.28□□□□□ -0.92
TTC3-216ENST00000479930 DDX3YO15523 660 aaKnown RBP9.28□□□□□ -0.92
TTC3-216ENST00000479930 GH2P01242 217 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 PCP11498 1178 aaKnown RBP9.28□□□□□ -0.92
TTC3-216ENST00000479930 FNTAP49354 379 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 SCARF1Q14162 830 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 ELF2Q15723 593 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 TOP1MTQ969P6 601 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 SLC32A1Q9H598 525 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 MDFIC2A0A1B0GVS7 189 aa9.27□□□□□ -0.92
TTC3-216ENST00000479930 GFPT2O94808 682 aa9.27□□□□□ -0.92
TTC3-216ENST00000479930 IL33O95760 270 aa9.27□□□□□ -0.92
TTC3-216ENST00000479930 EPRSP07814 1512 aaKnown RBP9.27□□□□□ -0.92
TTC3-216ENST00000479930 PRKAG1P54619 331 aa9.27□□□□□ -0.92
TTC3-216ENST00000479930 HMGCS2P54868 508 aa9.27□□□□□ -0.92
TTC3-216ENST00000479930 ZSWIM7Q19AV6 140 aa9.27□□□□□ -0.92
TTC3-216ENST00000479930 FBXL19Q6PCT2 694 aa9.27□□□□□ -0.92
TTC3-216ENST00000479930 CYP4Z2PQ8N1L4 340 aa9.27□□□□□ -0.92
TTC3-216ENST00000479930 CKAP2Q8WWK9 683 aa9.27□□□□□ -0.92
TTC3-216ENST00000479930 RGS18Q9NS28 235 aa9.27□□□□□ -0.92
TTC3-216ENST00000479930 RUVBL1Q9Y265 456 aaKnown RBP9.27□□□□□ -0.92
TTC3-216ENST00000479930 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.27□□□□□ -0.92
TTC3-216ENST00000479930 TBC1D3DA0A087WVF3 549 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 TBC1D3IA0A087WXS9 549 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 TBC1D3EA0A087X179 549 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 TBC1D3KA0A087X1G2 549 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 TBC1D3FA6NER0 549 aaPredicted RBP9.27□□□□□ -0.93
TTC3-216ENST00000479930 TBC1D3LB9A6J9 549 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 GPR182O15218 404 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 TBC1D3HP0C7X1 549 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 ZNF806P0C7X5 589 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 LRRC41Q15345 812 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 DEFB115Q30KQ5 88 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 KLHL12Q53G59 568 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 TBC1D3GQ6DHY5 549 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 TBC1D3CQ6IPX1 549 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 TBC1D3Q8IZP1 549 aaPredicted RBP9.27□□□□□ -0.93
TTC3-216ENST00000479930 PCSK9Q8NBP7 692 aaKnown RBP9.27□□□□□ -0.93
TTC3-216ENST00000479930 NSUN6Q8TEA1 469 aaKnown RBP9.27□□□□□ -0.93
TTC3-216ENST00000479930 TESK2Q96S53 571 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 KANSL2Q9H9L4 492 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 UHRF1BP1Q6BDS2 1440 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 EYA2O00167 538 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 E2F3O00716 465 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 COPEO14579 308 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 OR6B1O95007 311 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 VAV1P15498 845 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 VAMP7P51809 220 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 CCDC81Q6ZN84 652 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 CALML6Q8TD86 181 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 ITCHQ96J02 903 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 MCCC1Q96RQ3 725 aaPredicted RBP9.27□□□□□ -0.93
TTC3-216ENST00000479930 STRA6Q9BX79 667 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 SIRPGQ9P1W8 387 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 FEM1BQ9UK73 627 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 SPAG7O75391 227 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 LCA5LO95447 670 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 CHRNDQ07001 517 aa9.27□□□□□ -0.93
TTC3-216ENST00000479930 PEX6Q13608 980 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms