RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 EXOC3L4Q17RC7 722 aa16.4■□□□□ 0.22
C9orf3-217ENST00000479161 VWA3BQ502W6 1294 aa16.4■□□□□ 0.22
C9orf3-217ENST00000479161 MIIPQ5JXC2 388 aa16.4■□□□□ 0.22
C9orf3-217ENST00000479161 TRIM65Q6PJ69 517 aa16.4■□□□□ 0.22
C9orf3-217ENST00000479161 PDZD8Q8NEN9 1154 aa16.4■□□□□ 0.22
C9orf3-217ENST00000479161 ZSCAN18Q8TBC5 510 aaPredicted RBP16.4■□□□□ 0.22
C9orf3-217ENST00000479161 ING5Q8WYH8 240 aa16.4■□□□□ 0.22
C9orf3-217ENST00000479161 MRPS31Q92665 395 aaKnown RBP16.4■□□□□ 0.22
C9orf3-217ENST00000479161 ZSWIM3Q96MP5 696 aa16.4■□□□□ 0.22
C9orf3-217ENST00000479161 ARID3AQ99856 593 aa16.4■□□□□ 0.22
C9orf3-217ENST00000479161 MED10Q9BTT4 135 aa16.4■□□□□ 0.22
C9orf3-217ENST00000479161 INTS2Q9H0H0 1204 aaKnown RBP16.4■□□□□ 0.22
C9orf3-217ENST00000479161 SAMSN1Q9NSI8 373 aaKnown RBP16.4■□□□□ 0.22
C9orf3-217ENST00000479161 GCNT4Q9P109 453 aa16.4■□□□□ 0.22
C9orf3-217ENST00000479161 ZDBF2Q9HCK1 2354 aa16.4■□□□□ 0.22
C9orf3-217ENST00000479161 KCNJ18B7U540 433 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 CLDN5O00501 218 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 NRG2O14511 850 aaPredicted RBP16.39■□□□□ 0.21
C9orf3-217ENST00000479161 AP1G2O75843 785 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 VDRP11473 427 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 TCF3P15923 654 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 CACNA2D1P54289 1103 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 MLLT6P55198 1093 aaPredicted RBP16.39■□□□□ 0.21
C9orf3-217ENST00000479161 PFKPQ01813 784 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 KCNJ12Q14500 433 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 MEA1Q16626 185 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 GPR158Q5T848 1215 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 PHLDB3Q6NSJ2 640 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 CAVIN1Q6NZI2 390 aaKnown RBP16.39■□□□□ 0.21
C9orf3-217ENST00000479161 MFSD6LQ8IWD5 586 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 PPM1KQ8N3J5 372 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 ANKRD52Q8NB46 1076 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 ZMIZ2Q8NF64 920 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 GPR152Q8TDT2 470 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 ASIC4Q96FT7 647 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 HEXIM2Q96MH2 286 aaKnown RBP16.39■□□□□ 0.21
C9orf3-217ENST00000479161 SLITRK1Q96PX8 696 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 SMOQ99835 787 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 DUSP16Q9BY84 665 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 FBXO44Q9H4M3 255 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 KIF9Q9HAQ2 790 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.39■□□□□ 0.215e-17■■■■■ 409.9
C9orf3-217ENST00000479161 KRT82Q9NSB4 513 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 APEX2Q9UBZ4 518 aa16.39■□□□□ 0.21
C9orf3-217ENST00000479161 F5P12259 2224 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 TADA3O75528 432 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 CAVIN2O95810 425 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 CCDC130P13994 396 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 NPR3P17342 541 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 PSMC3P17980 439 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 PON1P27169 355 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 YWHAQP27348 245 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 TUBP50607 506 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 ZNF132P52740 706 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 MFAP3P55082 362 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 FCHO2Q0JRZ9 810 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 TMEM31Q5JXX7 168 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 PPP1R26Q5T8A7 1209 aaPredicted RBP16.38■□□□□ 0.21
C9orf3-217ENST00000479161 SDHAF4Q5VUM1 108 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 TANGO2Q6ICL3 276 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 CLEC20AQ6ZU45 233 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 ARID3BQ8IVW6 561 aaPredicted RBP16.38■□□□□ 0.21
C9orf3-217ENST00000479161 CMTM8Q8IZV2 173 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 ZNF276Q8N554 614 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 RSAD2Q8WXG1 361 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 KCNK16Q96T55 309 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 ANP32EQ9BTT0 268 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 FUCA2Q9BTY2 467 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 SLC46A2Q9BY10 475 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 C11orf16Q9NQ32 467 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 TRPM5Q9NZQ8 1165 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 MAGED2Q9UNF1 606 aaPredicted RBP16.38■□□□□ 0.21
C9orf3-217ENST00000479161 DAAM1Q9Y4D1 1078 aa16.38■□□□□ 0.21
C9orf3-217ENST00000479161 KIF26AQ9ULI4 1882 aaPredicted RBP16.37■□□□□ 0.21
C9orf3-217ENST00000479161 HHLA1C9JL84 531 aa16.37■□□□□ 0.21
C9orf3-217ENST00000479161 ZDHHC11BP0C7U3 371 aa16.37■□□□□ 0.21
C9orf3-217ENST00000479161 ZNF18P17022 549 aa16.37■□□□□ 0.21
C9orf3-217ENST00000479161 GJA1P17302 382 aa16.37■□□□□ 0.21
C9orf3-217ENST00000479161 RFX1P22670 979 aa16.37■□□□□ 0.21
C9orf3-217ENST00000479161 SLC8A3P57103 927 aa16.37■□□□□ 0.21
C9orf3-217ENST00000479161 USP46P62068 366 aa16.37■□□□□ 0.21
C9orf3-217ENST00000479161 LRMPQ12912 555 aa16.37■□□□□ 0.21
C9orf3-217ENST00000479161 NCAPHQ15003 741 aa16.37■□□□□ 0.21
C9orf3-217ENST00000479161 CNGA2Q16280 664 aa16.37■□□□□ 0.21
C9orf3-217ENST00000479161 SGO2Q562F6 1265 aa16.37■□□□□ 0.21
C9orf3-217ENST00000479161 C11orf57Q6ZUT1 292 aaPredicted RBP16.37■□□□□ 0.21
C9orf3-217ENST00000479161 CELF5Q8N6W0 485 aaKnown RBP16.37■□□□□ 0.21
C9orf3-217ENST00000479161 DNASE1L2Q92874 299 aa16.37■□□□□ 0.21
C9orf3-217ENST00000479161 KREMEN1Q96MU8 473 aa16.37■□□□□ 0.21
C9orf3-217ENST00000479161 RPP25Q9BUL9 199 aaKnown RBP16.37■□□□□ 0.21
C9orf3-217ENST00000479161 SLITRK6Q9H5Y7 841 aa16.37■□□□□ 0.21
C9orf3-217ENST00000479161 FAM49BQ9NUQ9 324 aa16.37■□□□□ 0.21
C9orf3-217ENST00000479161 ZNF840PA6NDX5 716 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 TMEM221A6NGB7 291 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 M0R296 226 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 BEST1O76090 585 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 OLFM2O95897 454 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 TPM2P07951 284 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 AVPR1AP37288 418 aa16.36■□□□□ 0.21
C9orf3-217ENST00000479161 CDR1P51861 262 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms