RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 AP3B1O00203 1094 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 FCHO1O14526 889 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 EXOC3O60645 756 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 CLASP2O75122 1294 aaKnown RBP6.3□□□□□ -1.4
RC3H1-204ENST00000479099 F9P00740 461 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 TUBB4AP04350 444 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 SNRPA1P09661 255 aaKnown RBP6.3□□□□□ -1.4
RC3H1-204ENST00000479099 IL10P22301 178 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 CIITAP33076 1130 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 RFC1P35251 1148 aaPredicted RBP6.3□□□□□ -1.4
RC3H1-204ENST00000479099 GP5P40197 560 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 BUD31P41223 144 aaPredicted RBP6.3□□□□□ -1.4
RC3H1-204ENST00000479099 FNTBP49356 437 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 MXI1P50539 228 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 ARFIP2P53365 341 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 CDK17Q00537 523 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 MESP2Q0VG99 397 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 TUSC3Q13454 348 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 SMAD4Q13485 552 aaKnown RBP6.3□□□□□ -1.4
RC3H1-204ENST00000479099 SNW1Q13573 536 aaKnown RBP6.3□□□□□ -1.4
RC3H1-204ENST00000479099 NR0B2Q15466 257 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 GPR68Q15743 365 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 TBCCQ15814 346 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 ADRM1Q16186 407 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 CDKAL1Q5VV42 579 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 NAA35Q5VZE5 725 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 LETMD1Q6P1Q0 360 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 MTFR2Q6P444 385 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 CYP20A1Q6UW02 462 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 ATF7IPQ6VMQ6 1270 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 RNF44Q7L0R7 432 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 METTL23Q86XA0 190 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 LYSMD2Q8IV50 215 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 SCN4BQ8IWT1 228 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 SCML4Q8N228 414 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 ANKRD35Q8N283 1001 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 C17orf53Q8N3J3 647 aaPredicted RBP6.3□□□□□ -1.4
RC3H1-204ENST00000479099 BHLHE22Q8NFJ8 381 aaPredicted RBP6.3□□□□□ -1.4
RC3H1-204ENST00000479099 CSGALNACT1Q8TDX6 532 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 SLC22A17Q8WUG5 538 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 ANKRD49Q8WVL7 239 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 SEPT1Q8WYJ6 367 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 FATE1Q969F0 183 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 FAM162AQ96A26 154 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 VPS33AQ96AX1 596 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 TRIM43Q96BQ3 446 aaPredicted RBP6.3□□□□□ -1.4
RC3H1-204ENST00000479099 PGAP3Q96FM1 320 aaPredicted RBP6.3□□□□□ -1.4
RC3H1-204ENST00000479099 COX4I2Q96KJ9 171 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 THUMPD3Q9BV44 507 aaKnown RBP6.3□□□□□ -1.4
RC3H1-204ENST00000479099 USP44Q9H0E7 712 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 NCOR1P1Q9H4R4 102 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 TASP1Q9H6P5 420 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 SUDS3Q9H7L9 328 aaPredicted RBP6.3□□□□□ -1.4
RC3H1-204ENST00000479099 CARS2Q9HA77 564 aaKnown RBP6.3□□□□□ -1.4
RC3H1-204ENST00000479099 ATP13A1Q9HD20 1204 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.3□□□□□ -1.4
RC3H1-204ENST00000479099 NDUFAF4Q9P032 175 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 CPA4Q9UI42 421 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 ANAPC5Q9UJX4 755 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 CAMK2AQ9UQM7 478 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 NAALADL1Q9UQQ1 740 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 MTO1Q9Y2Z2 717 aaKnown RBP6.3□□□□□ -1.4
RC3H1-204ENST00000479099 TRIM17Q9Y577 477 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 SQORQ9Y6N5 450 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 CAPN6Q9Y6Q1 641 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 NUMBLQ9Y6R0 609 aa6.3□□□□□ -1.4
RC3H1-204ENST00000479099 CNTNAP4Q9C0A0 1308 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 TCRBV5S4A2TA0A5A2 114 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 RGSL1A5PLK6 1076 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 UBXN8O00124 270 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 SCDO00767 359 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 NOL3O60936 208 aaKnown RBP6.29□□□□□ -1.4
RC3H1-204ENST00000479099 TSC22D2O75157 780 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 METTL18O95568 372 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 CD3EP07766 207 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 PDHA1P08559 390 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 NPPBP16860 134 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 MTHFRP42898 656 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 MCAMP43121 646 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 RARSP54136 660 aaKnown RBP6.29□□□□□ -1.4
RC3H1-204ENST00000479099 MLLT6P55198 1093 aaPredicted RBP6.29□□□□□ -1.4
RC3H1-204ENST00000479099 C21orf58P58505 322 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 HERVK_113P62684 666 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 CCT2P78371 535 aaKnown RBP6.29□□□□□ -1.4
RC3H1-204ENST00000479099 SGCGQ13326 291 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 SPIDRQ14159 915 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 TRIM25Q14258 630 aaKnown RBP6.29□□□□□ -1.4
RC3H1-204ENST00000479099 NFE2L1Q14494 772 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 SEC23BQ15437 767 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 PRICKLE4Q2TBC4 344 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 PLEKHS1Q5SXH7 462 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 INO80CQ6PI98 192 aaPredicted RBP6.29□□□□□ -1.4
RC3H1-204ENST00000479099 IKBIPQ70UQ0 350 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 CDH24Q86UP0 819 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 PHYKPLQ8IUZ5 450 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 DPP10Q8N608 796 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 VGLL2Q8N8G2 317 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 TDRD5Q8NAT2 981 aaKnown RBP6.29□□□□□ -1.4
RC3H1-204ENST00000479099 CEP76Q8TAP6 659 aa6.29□□□□□ -1.4
RC3H1-204ENST00000479099 KBTBD7Q8WVZ9 684 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms