RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 COL3A1P02461 1466 aaPredicted RBP1.79□□□□□ -2.12
SRRM1-211ENST00000478890 ARHGEF17Q96PE2 2063 aaPredicted RBP1.78□□□□□ -2.12
SRRM1-211ENST00000478890 A0A1W2PPL8 197 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 PRSS29PA6NIE9 313 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 H3BNC9 293 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 H3BNX3 289 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 H7C1Q1 480 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 TRIM38O00635 465 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 ADAM10O14672 748 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 ZNF213O14771 459 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 DCLK1O15075 740 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 MOSPD3O75425 235 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 OFD1O75665 1012 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 ZRANB2O95218 330 aaKnown RBP eCLIP1.78□□□□□ -2.122e-15■□□□□ 10.6
SRRM1-211ENST00000478890 VNN1O95497 513 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 TOP3BO95985 862 aaKnown RBP1.78□□□□□ -2.12
SRRM1-211ENST00000478890 PRKCBP05771 671 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 CHRM5P08912 532 aaPredicted RBP1.78□□□□□ -2.12
SRRM1-211ENST00000478890 PF4V1P10720 104 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 CYP2C9P11712 490 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 XRCC6P12956 609 aaKnown RBP eCLIP1.78□□□□□ -2.12
SRRM1-211ENST00000478890 VCAM1P19320 739 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 IBSPP21815 317 aaPredicted RBP1.78□□□□□ -2.12
SRRM1-211ENST00000478890 FPR3P25089 353 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 VIPR2P41587 438 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 TOB1P50616 345 aaPredicted RBP1.78□□□□□ -2.12
SRRM1-211ENST00000478890 RENBPP51606 427 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 UCP3P55916 312 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 KRTAP10-12P60413 245 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 E2F1Q01094 437 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 GHRHRQ02643 423 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 TRIP6Q15654 476 aaKnown RBP1.78□□□□□ -2.12
SRRM1-211ENST00000478890 FAM187BQ17R55 369 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 Q4G0T1 1027 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 CACHD1Q5VU97 1274 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 LMBRD2Q68DH5 695 aaPredicted RBP1.78□□□□□ -2.12
SRRM1-211ENST00000478890 C11orf87Q6NUJ2 197 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 PPP4R4Q6NUP7 873 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 TMEM65Q6PI78 240 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 ZNF783Q6ZMS7 281 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 MRPL10Q7Z7H8 261 aaKnown RBP1.78□□□□□ -2.12
SRRM1-211ENST00000478890 FAM177A1Q8N128 213 aaPredicted RBP1.78□□□□□ -2.12
SRRM1-211ENST00000478890 GALNT16Q8N428 558 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 SLC15A4Q8N697 577 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 CELF5Q8N6W0 485 aaKnown RBP1.78□□□□□ -2.12
SRRM1-211ENST00000478890 OSR1Q8TAX0 266 aaPredicted RBP1.78□□□□□ -2.12
SRRM1-211ENST00000478890 ZCRB1Q8TBF4 217 aaKnown RBP1.78□□□□□ -2.12
SRRM1-211ENST00000478890 TMEM171Q8WVE6 324 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 RAPGEF4Q8WZA2 1011 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 CHMP4CQ96CF2 233 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 MVB12AQ96EY5 273 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 RITA1Q96K30 269 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 CCDC17Q96LX7 622 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 LRGUKQ96M69 825 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 SNX18Q96RF0 628 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 WACQ9BTA9 647 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 MS4A7Q9GZW8 240 aaPredicted RBP1.78□□□□□ -2.12
SRRM1-211ENST00000478890 CXorf36Q9H7Y0 433 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 SNX15Q9NRS6 342 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 HOMER2Q9NSB8 354 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 PIH1D1Q9NWS0 290 aaKnown RBP1.78□□□□□ -2.12
SRRM1-211ENST00000478890 IP6K2Q9UHH9 426 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 AMFRQ9UKV5 643 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 SSX2IPQ9Y2D8 614 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 SPEF1Q9Y4P9 236 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 COL4A3BPQ9Y5P4 624 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 SQORQ9Y6N5 450 aa1.78□□□□□ -2.12
SRRM1-211ENST00000478890 POLR2AP24928 1970 aaKnown RBP1.78□□□□□ -2.13
SRRM1-211ENST00000478890 RGS10O43665 173 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 AP1G1O43747 822 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 TBC1D4O60343 1298 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 SRGAP2O75044 1071 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 RASAL1O95294 804 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 LATS1O95835 1130 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 FGBP02675 491 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 POU2F2P09086 479 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 CYP2A6P11509 494 aaPredicted RBP1.77□□□□□ -2.13
SRRM1-211ENST00000478890 CYP19A1P11511 503 aaPredicted RBP1.77□□□□□ -2.13
SRRM1-211ENST00000478890 PHKG2P15735 406 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 YY1P25490 414 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 PRKAR1BP31321 381 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 SLC11A2P49281 568 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 COPB1P53618 953 aaKnown RBP1.77□□□□□ -2.13
SRRM1-211ENST00000478890 ITGA8P53708 1063 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 RAB1AP62820 205 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 SSBP2P81877 361 aaPredicted RBP1.77□□□□□ -2.13
SRRM1-211ENST00000478890 AMPD3Q01432 767 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 ZNF91Q05481 1191 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 TCF15Q12870 199 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 MYO1EQ12965 1108 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 SLC13A2Q13183 592 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 RAB32Q13637 225 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 LAMB3Q13751 1172 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 PLA1AQ53H76 456 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 TMEM240Q5SV17 173 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 AWAT2Q6E213 333 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 MTHFD1LQ6UB35 978 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 IZUMO1Q8IYV9 350 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 DNAJC5GQ8N7S2 189 aa1.77□□□□□ -2.13
SRRM1-211ENST00000478890 C8orf58Q8NAV2 365 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms