RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 COPS6Q7L5N1 327 aa6.93□□□□□ -1.3
SSR3-207ENST00000478842 ARMC9Q7Z3E5 817 aa6.93□□□□□ -1.3
SSR3-207ENST00000478842 IL31RAQ8NI17 732 aa6.93□□□□□ -1.3
SSR3-207ENST00000478842 ST8SIA2Q92186 375 aa6.93□□□□□ -1.3
SSR3-207ENST00000478842 ANKS1AQ92625 1134 aa6.93□□□□□ -1.3
SSR3-207ENST00000478842 CELF1Q92879 486 aaKnown RBP6.93□□□□□ -1.3
SSR3-207ENST00000478842 NT5C1BQ96P26 610 aa6.93□□□□□ -1.3
SSR3-207ENST00000478842 OR14A2Q96R54 314 aa6.93□□□□□ -1.3
SSR3-207ENST00000478842 NDC1Q9BTX1 674 aa6.93□□□□□ -1.3
SSR3-207ENST00000478842 NAA15Q9BXJ9 866 aaKnown RBP6.93□□□□□ -1.3
SSR3-207ENST00000478842 BRD9Q9H8M2 597 aa6.93□□□□□ -1.3
SSR3-207ENST00000478842 KIAA1586Q9HCI6 787 aa6.93□□□□□ -1.3
SSR3-207ENST00000478842 JKAMPQ9P055 326 aa6.93□□□□□ -1.3
SSR3-207ENST00000478842 CFAP97Q9P2B7 532 aa6.93□□□□□ -1.3
SSR3-207ENST00000478842 HECAQ9UBI9 543 aaPredicted RBP6.93□□□□□ -1.3
SSR3-207ENST00000478842 STAP2Q9UGK3 403 aa6.93□□□□□ -1.3
SSR3-207ENST00000478842 CPA4Q9UI42 421 aa6.93□□□□□ -1.3
SSR3-207ENST00000478842 PHTF1Q9UMS5 762 aa6.93□□□□□ -1.3
SSR3-207ENST00000478842 SLC30A1Q9Y6M5 507 aa6.93□□□□□ -1.3
SSR3-207ENST00000478842 DUSP10Q9Y6W6 482 aa6.93□□□□□ -1.3
SSR3-207ENST00000478842 ADAMTS20P59510 1910 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 KIAA0391O15091 583 aaKnown RBP6.92□□□□□ -1.3
SSR3-207ENST00000478842 SLC43A1O75387 559 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 STC2O76061 302 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 HAUS5O94927 633 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 PLATP00750 562 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 ANXA1P04083 346 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 HTR3AP46098 478 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 HHEXQ03014 270 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 ARHGEF6Q15052 776 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 LONRF3Q496Y0 759 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 EFCAB12Q6NXP0 572 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 DRICH1Q6PGQ1 229 aaPredicted RBP6.92□□□□□ -1.3
SSR3-207ENST00000478842 PPP1R3BQ86XI6 285 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 PDSS2Q86YH6 399 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 SLC17A8Q8NDX2 589 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 SLC35B2Q8TB61 432 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 FEZF2Q8TBJ5 459 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 KBTBD7Q8WVZ9 684 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 TFAP2CQ92754 450 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 TNPO1Q92973 898 aaKnown RBP6.92□□□□□ -1.3
SSR3-207ENST00000478842 GJA10Q969M2 543 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 TMEM176AQ96HP8 235 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 GNRHR2Q96P88 292 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 MYD88Q99836 296 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 CPPED1Q9BRF8 314 aaPredicted RBP6.92□□□□□ -1.3
SSR3-207ENST00000478842 THUMPD2Q9BTF0 503 aaKnown RBP6.92□□□□□ -1.3
SSR3-207ENST00000478842 RTEL1Q9NZ71 1219 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 PAXBP1Q9Y5B6 917 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 CEP290O15078 2479 aa6.92□□□□□ -1.3
SSR3-207ENST00000478842 ZNF646O15015 1829 aaPredicted RBP6.92□□□□□ -1.3
SSR3-207ENST00000478842 COL1A1P02452 1464 aaPredicted RBP6.92□□□□□ -1.3
SSR3-207ENST00000478842 LOC100996750A0A140TA64 210 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 MYO1FO00160 1098 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 SLC7A1P30825 629 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 MORC3Q14149 939 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 UBXN2BQ14CS0 331 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 PROSER3Q2NL68 480 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 ATXN7L2Q5T6C5 722 aaPredicted RBP6.91□□□□□ -1.3
SSR3-207ENST00000478842 GLB1LQ6UWU2 654 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 GPRIN1Q7Z2K8 1008 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 CIR1Q86X95 450 aaPredicted RBP6.91□□□□□ -1.3
SSR3-207ENST00000478842 ANKRD35Q8N283 1001 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 PHKBQ93100 1093 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 ZNF333Q96JL9 665 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 MRGPRX1Q96LB2 322 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 MYOCQ99972 504 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 ISCA1Q9BUE6 129 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 LSM14BQ9BX40 385 aaKnown RBP6.91□□□□□ -1.3
SSR3-207ENST00000478842 KRTAP4-6Q9BYQ5 205 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 PNNQ9H307 717 aaKnown RBP6.91□□□□□ -1.3
SSR3-207ENST00000478842 ZCCHC4Q9H5U6 513 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 RSAD1Q9HA92 442 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 ZNF287Q9HBT7 754 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 NLRC4Q9NPP4 1024 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 PPP4R1LQ9P1A2 415 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 OGDHLQ9ULD0 1010 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 PCDHA6Q9UN73 950 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 ZFR2Q9UPR6 939 aaKnown RBP6.91□□□□□ -1.3
SSR3-207ENST00000478842 BRCA2P51587 3418 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 MYO3BQ8WXR4 1341 aa6.91□□□□□ -1.3
SSR3-207ENST00000478842 COL4A1P02462 1669 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 TRIOBPQ9H2D6 2365 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 ECM29Q5VYK3 1845 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 TCRBV7S2A1N4TA0A589 114 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 H0YGN5 161 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 UFL1O94874 794 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 MATN4O95460 622 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 EIF2S2P20042 333 aaKnown RBP6.9□□□□□ -1.3
SSR3-207ENST00000478842 PPP2R1AP30153 589 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 SOX8P57073 446 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 RAP2BP61225 183 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 SP3Q02447 781 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 AIMP1Q12904 312 aaKnown RBP6.9□□□□□ -1.3
SSR3-207ENST00000478842 HABP2Q14520 560 aaPredicted RBP6.9□□□□□ -1.3
SSR3-207ENST00000478842 KIF22Q14807 665 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 ELAVL1Q15717 326 aaKnown RBP6.9□□□□□ -1.3
SSR3-207ENST00000478842 UBXN11Q5T124 520 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 ANKS6Q68DC2 871 aa6.9□□□□□ -1.3
SSR3-207ENST00000478842 TCTN3Q6NUS6 607 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms