RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 MRPS18AQ9NVS2 196 aaKnown RBP2.13□□□□□ -2.07
CALD1-218ENST00000478075 ZBTB21Q9ULJ3 1066 aa2.13□□□□□ -2.07
CALD1-218ENST00000478075 NFS1Q9Y697 457 aa2.13□□□□□ -2.07
CALD1-218ENST00000478075 MYBBP1AQ9BQG0 1328 aaKnown RBP2.13□□□□□ -2.07
CALD1-218ENST00000478075 TCRBV5S1A1TA0A578 114 aa2.12□□□□□ -2.07
CALD1-218ENST00000478075 PODXLO00592 558 aa2.12□□□□□ -2.07
CALD1-218ENST00000478075 ZC3H11AO75152 810 aaKnown RBP eCLIP2.12□□□□□ -2.07
CALD1-218ENST00000478075 SLC43A1O75387 559 aa2.12□□□□□ -2.07
CALD1-218ENST00000478075 FKBP9O95302 570 aa2.12□□□□□ -2.07
CALD1-218ENST00000478075 ACAA1P09110 424 aaPredicted RBP2.12□□□□□ -2.07
CALD1-218ENST00000478075 ADCYAP1R1P41586 468 aa2.12□□□□□ -2.07
CALD1-218ENST00000478075 POLD2P49005 469 aa2.12□□□□□ -2.07
CALD1-218ENST00000478075 P2RX3P56373 397 aa2.12□□□□□ -2.07
CALD1-218ENST00000478075 CCT2P78371 535 aaKnown RBP2.12□□□□□ -2.07
CALD1-218ENST00000478075 MALLQ13021 153 aa2.12□□□□□ -2.07
CALD1-218ENST00000478075 PABPC4Q13310 644 aaKnown RBP eCLIP2.12□□□□□ -2.07
CALD1-218ENST00000478075 SFRP4Q6FHJ7 346 aaPredicted RBP2.12□□□□□ -2.07
CALD1-218ENST00000478075 ZNF365Q70YC5 407 aa2.12□□□□□ -2.07
CALD1-218ENST00000478075 FKBP9P1Q75LS8 142 aa2.12□□□□□ -2.07
CALD1-218ENST00000478075 DCBLD1Q8N8Z6 715 aa2.12□□□□□ -2.07
CALD1-218ENST00000478075 TMIEQ8NEW7 156 aa2.12□□□□□ -2.07
CALD1-218ENST00000478075 THAP7Q9BT49 309 aaPredicted RBP2.12□□□□□ -2.07
CALD1-218ENST00000478075 IMPG2Q9BZV3 1241 aa2.12□□□□□ -2.07
CALD1-218ENST00000478075 CIPCQ9C0C6 399 aa2.12□□□□□ -2.07
CALD1-218ENST00000478075 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.12□□□□□ -2.07
CALD1-218ENST00000478075 EMC7Q9NPA0 242 aa2.12□□□□□ -2.07
CALD1-218ENST00000478075 DMRT3Q9NQL9 472 aa2.12□□□□□ -2.07
CALD1-218ENST00000478075 HIF1ANQ9NWT6 349 aa2.12□□□□□ -2.07
CALD1-218ENST00000478075 CCNL1Q9UK58 526 aaPredicted RBP2.12□□□□□ -2.07
CALD1-218ENST00000478075 GRM6O15303 877 aa2.11□□□□□ -2.07
CALD1-218ENST00000478075 GLIPR1P48060 266 aa2.11□□□□□ -2.07
CALD1-218ENST00000478075 IL2P60568 153 aa2.11□□□□□ -2.07
CALD1-218ENST00000478075 PPATQ06203 517 aa2.11□□□□□ -2.07
CALD1-218ENST00000478075 SHBQ15464 509 aa2.11□□□□□ -2.07
CALD1-218ENST00000478075 ZRSR1Q15695 479 aaKnown RBP2.11□□□□□ -2.07
CALD1-218ENST00000478075 SLC4A8Q2Y0W8 1093 aa2.11□□□□□ -2.07
CALD1-218ENST00000478075 ZIK1Q3SY52 487 aaPredicted RBP2.11□□□□□ -2.07
CALD1-218ENST00000478075 Q6ZWC4 215 aa2.11□□□□□ -2.07
CALD1-218ENST00000478075 TRAPPC11Q7Z392 1133 aa2.11□□□□□ -2.07
CALD1-218ENST00000478075 SLC17A8Q8NDX2 589 aa2.11□□□□□ -2.07
CALD1-218ENST00000478075 OR2W6PQ8NHA6 318 aa2.11□□□□□ -2.07
CALD1-218ENST00000478075 FEZ1Q99689 392 aa2.11□□□□□ -2.07
CALD1-218ENST00000478075 PACSIN1Q9BY11 444 aa2.11□□□□□ -2.07
CALD1-218ENST00000478075 SERHLQ9NQF3 203 aa2.11□□□□□ -2.07
CALD1-218ENST00000478075 PLK2Q9NYY3 685 aa2.11□□□□□ -2.07
CALD1-218ENST00000478075 POLRMTO00411 1230 aaKnown RBP2.1□□□□□ -2.07
CALD1-218ENST00000478075 IGLV2-11P01706 119 aa2.1□□□□□ -2.07
CALD1-218ENST00000478075 ATP2B1P20020 1258 aa2.1□□□□□ -2.07
CALD1-218ENST00000478075 LPOP22079 712 aaPredicted RBP2.1□□□□□ -2.07
CALD1-218ENST00000478075 LIPAP38571 399 aa2.1□□□□□ -2.07
CALD1-218ENST00000478075 DLX5P56178 289 aa2.1□□□□□ -2.07
CALD1-218ENST00000478075 ZNF793Q6ZN11 406 aa2.1□□□□□ -2.07
CALD1-218ENST00000478075 KCNK18Q7Z418 384 aa2.1□□□□□ -2.07
CALD1-218ENST00000478075 PNISRQ8TF01 805 aaKnown RBP2.1□□□□□ -2.07
CALD1-218ENST00000478075 GFRA4Q9GZZ7 299 aa2.1□□□□□ -2.07
CALD1-218ENST00000478075 TOPORSQ9NS56 1045 aaPredicted RBP2.1□□□□□ -2.07
CALD1-218ENST00000478075 IGKV3D-15A0A087WSY6 115 aa2.09□□□□□ -2.07
CALD1-218ENST00000478075 E9PLN8 166 aa2.09□□□□□ -2.07
CALD1-218ENST00000478075 PPM1DO15297 605 aa2.09□□□□□ -2.07
CALD1-218ENST00000478075 HOXC6P09630 235 aa2.09□□□□□ -2.07
CALD1-218ENST00000478075 SBK3P0C264 359 aa2.09□□□□□ -2.07
CALD1-218ENST00000478075 CPA2P48052 419 aa2.09□□□□□ -2.07
CALD1-218ENST00000478075 CRIP2P52943 208 aaPredicted RBP2.09□□□□□ -2.07
CALD1-218ENST00000478075 STIM1Q13586 685 aa2.09□□□□□ -2.07
CALD1-218ENST00000478075 PCBP1Q15365 356 aaKnown RBP eCLIP2.09□□□□□ -2.07
CALD1-218ENST00000478075 FLYWCH1Q4VC44 716 aa2.09□□□□□ -2.07
CALD1-218ENST00000478075 TMTC4Q5T4D3 741 aa2.09□□□□□ -2.07
CALD1-218ENST00000478075 SLC30A10Q6XR72 485 aa2.09□□□□□ -2.07
CALD1-218ENST00000478075 LRRTM3Q86VH5 581 aa2.09□□□□□ -2.07
CALD1-218ENST00000478075 AHI1Q8N157 1196 aa2.09□□□□□ -2.07
CALD1-218ENST00000478075 VKORC1Q9BQB6 163 aa2.09□□□□□ -2.07
CALD1-218ENST00000478075 ETAA1Q9NY74 926 aa2.09□□□□□ -2.07
CALD1-218ENST00000478075 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.08□□□□□ -2.08
CALD1-218ENST00000478075 PPP1R12AO14974 1030 aaPredicted RBP2.08□□□□□ -2.08
CALD1-218ENST00000478075 SLC16A5O15375 505 aa2.08□□□□□ -2.08
CALD1-218ENST00000478075 PRKCBP05771 671 aa2.08□□□□□ -2.08
CALD1-218ENST00000478075 CD63P08962 238 aa2.08□□□□□ -2.08
CALD1-218ENST00000478075 MYCLP12524 364 aaPredicted RBP2.08□□□□□ -2.08
CALD1-218ENST00000478075 HOXB2P14652 356 aa2.08□□□□□ -2.08
CALD1-218ENST00000478075 ANOS1P23352 680 aa2.08□□□□□ -2.08
CALD1-218ENST00000478075 FXR1P51114 621 aaKnown RBP eCLIP2.08□□□□□ -2.08
CALD1-218ENST00000478075 ALDH5A1P51649 535 aaPredicted RBP2.08□□□□□ -2.08
CALD1-218ENST00000478075 CLCN2P51788 898 aa2.08□□□□□ -2.08
CALD1-218ENST00000478075 RBL2Q08999 1139 aa2.08□□□□□ -2.08
CALD1-218ENST00000478075 SQSTM1Q13501 440 aa2.08□□□□□ -2.08
CALD1-218ENST00000478075 TCEA2Q15560 299 aa2.08□□□□□ -2.08
CALD1-218ENST00000478075 ATP13A4Q4VNC1 1196 aa2.08□□□□□ -2.08
CALD1-218ENST00000478075 PPM1KQ8N3J5 372 aa2.08□□□□□ -2.08
CALD1-218ENST00000478075 TMEM199Q8N511 208 aa2.08□□□□□ -2.08
CALD1-218ENST00000478075 PSD4Q8NDX1 1056 aa2.08□□□□□ -2.08
CALD1-218ENST00000478075 SCAMP4Q969E2 229 aa2.08□□□□□ -2.08
CALD1-218ENST00000478075 SLC45A2Q9UMX9 530 aa2.08□□□□□ -2.08
CALD1-218ENST00000478075 TTBK1Q5TCY1 1321 aaPredicted RBP2.08□□□□□ -2.08
CALD1-218ENST00000478075 KRTAP4-16G5E9R7 235 aaPredicted RBP2.07□□□□□ -2.08
CALD1-218ENST00000478075 NDUFB8O95169 186 aa2.07□□□□□ -2.08
CALD1-218ENST00000478075 EPN2O95208 641 aa2.07□□□□□ -2.08
CALD1-218ENST00000478075 PAK4O96013 591 aaPredicted RBP2.07□□□□□ -2.08
CALD1-218ENST00000478075 SLC5A3P53794 718 aa2.07□□□□□ -2.08
CALD1-218ENST00000478075 SESN3P58005 492 aa2.07□□□□□ -2.08
CALD1-218ENST00000478075 PTGR1Q14914 329 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms