RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 ST3GAL2Q16842 350 aa12.55□□□□□ -0.4
CPSF7-211ENST00000477890 TCEAL6Q6IPX3 200 aa12.55□□□□□ -0.4
CPSF7-211ENST00000477890 WDR49Q8IV35 697 aa12.55□□□□□ -0.4
CPSF7-211ENST00000477890 RDH13Q8NBN7 331 aa12.55□□□□□ -0.4
CPSF7-211ENST00000477890 TCEAL3Q969E4 200 aa12.55□□□□□ -0.4
CPSF7-211ENST00000477890 PCED1BQ96HM7 432 aa12.55□□□□□ -0.4
CPSF7-211ENST00000477890 MRPL45Q9BRJ2 306 aaKnown RBP12.55□□□□□ -0.4
CPSF7-211ENST00000477890 LRRC27Q9C0I9 530 aa12.55□□□□□ -0.4
CPSF7-211ENST00000477890 TNMDQ9H2S6 317 aa12.55□□□□□ -0.4
CPSF7-211ENST00000477890 KIAA1586Q9HCI6 787 aa12.55□□□□□ -0.4
CPSF7-211ENST00000477890 VPS45Q9NRW7 570 aa12.55□□□□□ -0.4
CPSF7-211ENST00000477890 FOXD4L1Q9NU39 408 aa12.55□□□□□ -0.4
CPSF7-211ENST00000477890 EBF1Q9UH73 591 aa12.55□□□□□ -0.4
CPSF7-211ENST00000477890 MTMR6Q9Y217 621 aa12.55□□□□□ -0.4
CPSF7-211ENST00000477890 MAP1BP46821 2468 aaKnown RBP12.55□□□□□ -0.4
CPSF7-211ENST00000477890 NUP205Q92621 2012 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 F8VP50 259 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 LEFTY2O00292 366 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 TM4SF5O14894 197 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 ABL1P00519 1130 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 DLATP10515 647 aaKnown RBP12.54□□□□□ -0.4
CPSF7-211ENST00000477890 PFKLP17858 780 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 TNNI1P19237 187 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 GBP1P32455 592 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 HOXD13P35453 343 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 GNL1P36915 607 aaPredicted RBP12.54□□□□□ -0.4
CPSF7-211ENST00000477890 OPRD1P41143 372 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 NASPP49321 788 aaPredicted RBP12.54□□□□□ -0.4
CPSF7-211ENST00000477890 SEC13P55735 322 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 ASIC1P78348 528 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 ZXDBP98169 803 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 CREB5Q02930 508 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 SNRNP35Q16560 246 aaKnown RBP12.54□□□□□ -0.4
CPSF7-211ENST00000477890 C2orf27AQ580R0 203 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 MDH1BQ5I0G3 518 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 N4BP2L1Q5TBK1 243 aaPredicted RBP12.54□□□□□ -0.4
CPSF7-211ENST00000477890 RNF43Q68DV7 783 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 HS2ST1Q7LGA3 356 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 TRAPPC11Q7Z392 1133 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 ABCA7Q8IZY2 2146 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 TSTD1Q8NFU3 115 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 OR6B3Q8NGW1 331 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 CCDC26Q8TAB7 109 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 MYCBPAPQ8TBZ2 947 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 CEP295NLQ96MC4 621 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 FNBP1Q96RU3 617 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 TPSD1Q9BZJ3 242 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 TRIM9Q9C026 710 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 SNX25Q9H3E2 840 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 ZSCAN16Q9H4T2 348 aaPredicted RBP12.54□□□□□ -0.4
CPSF7-211ENST00000477890 EHD2Q9NZN4 543 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 INVSQ9Y283 1065 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 THADAQ6YHU6 1953 aa12.54□□□□□ -0.4
CPSF7-211ENST00000477890 KMT2BQ9UMN6 2715 aaPredicted RBP12.53□□□□□ -0.4
CPSF7-211ENST00000477890 ZNF840PA6NDX5 716 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 K7EQS6 105 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 CLIC2O15247 247 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 EIF3DO15371 548 aaKnown RBP eCLIP12.53□□□□□ -0.4
CPSF7-211ENST00000477890 CAVIN2O95810 425 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 CST3P01034 146 aaPredicted RBP12.53□□□□□ -0.4
CPSF7-211ENST00000477890 PPP3CCP48454 512 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 TNNC1P63316 161 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 AMPD3Q01432 767 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 IFRD2Q12894 506 aaPredicted RBP12.53□□□□□ -0.4
CPSF7-211ENST00000477890 E2F4Q16254 413 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 ANO7Q6IWH7 933 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 FILIP1Q7Z7B0 1213 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 LINC00301Q8NCQ3 95 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 USP33Q8TEY7 942 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 CCDC127Q96BQ5 260 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 DHX58Q96C10 678 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 INTS4Q96HW7 963 aaKnown RBP12.53□□□□□ -0.4
CPSF7-211ENST00000477890 CGRRF1Q99675 332 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 TTLL2Q9BWV7 592 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 RNF38Q9H0F5 515 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 KBTBD4Q9NVX7 518 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 SMPD4Q9NXE4 827 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 ANGPTL2Q9UKU9 493 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 NME7Q9Y5B8 376 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 CPQQ9Y646 472 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 MYOFQ9NZM1 2061 aa12.53□□□□□ -0.4
CPSF7-211ENST00000477890 BCLAF3A2AJT9 711 aaKnown RBP12.52□□□□□ -0.41
CPSF7-211ENST00000477890 ANTXRLA6NF34 631 aa12.52□□□□□ -0.41
CPSF7-211ENST00000477890 SCAMP3O14828 347 aaKnown RBP12.52□□□□□ -0.41
CPSF7-211ENST00000477890 SPTLC2O15270 562 aa12.52□□□□□ -0.41
CPSF7-211ENST00000477890 TGFB1I1O43294 461 aa12.52□□□□□ -0.41
CPSF7-211ENST00000477890 STX6O43752 255 aa12.52□□□□□ -0.41
CPSF7-211ENST00000477890 TACC1O75410 805 aa12.52□□□□□ -0.41
CPSF7-211ENST00000477890 CYP17A1P05093 508 aa12.52□□□□□ -0.41
CPSF7-211ENST00000477890 PTPN1P18031 435 aaKnown RBP12.52□□□□□ -0.41
CPSF7-211ENST00000477890 PMLP29590 882 aa12.52□□□□□ -0.41
CPSF7-211ENST00000477890 CYP2J2P51589 502 aa12.52□□□□□ -0.41
CPSF7-211ENST00000477890 CACNA2D1P54289 1103 aa12.52□□□□□ -0.41
CPSF7-211ENST00000477890 NOP14P78316 857 aaKnown RBP12.52□□□□□ -0.41
CPSF7-211ENST00000477890 SLC7A9P82251 487 aa12.52□□□□□ -0.41
CPSF7-211ENST00000477890 TAF10Q12962 218 aa12.52□□□□□ -0.41
CPSF7-211ENST00000477890 PSMD6Q15008 389 aa12.52□□□□□ -0.41
CPSF7-211ENST00000477890 GAB4Q2WGN9 574 aa12.52□□□□□ -0.41
CPSF7-211ENST00000477890 WDR72Q3MJ13 1102 aa12.52□□□□□ -0.41
CPSF7-211ENST00000477890 USP39Q53GS9 565 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms