RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 UBAP2LQ14157 1087 aaKnown RBP10.21□□□□□ -0.78
CMC1-209ENST00000477739 MTFR1Q15390 333 aa10.21□□□□□ -0.78
CMC1-209ENST00000477739 TCHHL1Q5QJ38 904 aaPredicted RBP10.21□□□□□ -0.78
CMC1-209ENST00000477739 CROCCP2Q86T23 111 aa10.21□□□□□ -0.78
CMC1-209ENST00000477739 C12orf56Q8IXR9 622 aa10.21□□□□□ -0.78
CMC1-209ENST00000477739 MAIP1Q8WWC4 291 aa10.21□□□□□ -0.78
CMC1-209ENST00000477739 PRPF31Q8WWY3 499 aaKnown RBP10.21□□□□□ -0.78
CMC1-209ENST00000477739 CNKSR2Q8WXI2 1034 aa10.21□□□□□ -0.78
CMC1-209ENST00000477739 P3H4Q92791 437 aa10.21□□□□□ -0.78
CMC1-209ENST00000477739 CPB2Q96IY4 423 aa10.21□□□□□ -0.78
CMC1-209ENST00000477739 CAMKK2Q96RR4 588 aa10.21□□□□□ -0.78
CMC1-209ENST00000477739 STRA6Q9BX79 667 aa10.21□□□□□ -0.78
CMC1-209ENST00000477739 DHX35Q9H5Z1 703 aaKnown RBP10.21□□□□□ -0.78
CMC1-209ENST00000477739 PSMC3IPQ9P2W1 217 aaPredicted RBP10.21□□□□□ -0.78
CMC1-209ENST00000477739 SLC12A4Q9UP95 1085 aa10.21□□□□□ -0.78
CMC1-209ENST00000477739 FNDC3AQ9Y2H6 1198 aaKnown RBP10.21□□□□□ -0.78
CMC1-209ENST00000477739 DPPA5A6NC42 116 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 CREB3O43889 395 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 CYP1A2P05177 515 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 PTPRAP18433 802 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 KCNA3P22001 575 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 RPL10AP62906 217 aaKnown RBP10.2□□□□□ -0.78
CMC1-209ENST00000477739 TMEM132BQ14DG7 1078 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 SIX1Q15475 284 aaPredicted RBP10.2□□□□□ -0.78
CMC1-209ENST00000477739 HADHQ16836 314 aaKnown RBP10.2□□□□□ -0.78
CMC1-209ENST00000477739 C6orf163Q5TEZ5 329 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 PRPF39Q86UA1 669 aaKnown RBP10.2□□□□□ -0.78
CMC1-209ENST00000477739 TMEM192Q8IY95 271 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 NDUFAF2Q8N183 169 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 MTMR14Q8NCE2 650 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 PSPC1Q8WXF1 523 aaKnown RBP10.2□□□□□ -0.78
CMC1-209ENST00000477739 TFAP2BQ92481 460 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 SPATS2LQ9NUQ6 558 aaKnown RBP10.2□□□□□ -0.78
CMC1-209ENST00000477739 HOXC10Q9NYD6 342 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 GGA3Q9NZ52 723 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 UBP1Q9NZI7 540 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 ARFGEF1Q9Y6D6 1849 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 LRRC37AA6NMS7 1700 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 FSCN2O14926 492 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 NVLO15381 856 aaKnown RBP10.2□□□□□ -0.78
CMC1-209ENST00000477739 MAFGO15525 162 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 CIB2O75838 187 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 DCTN3O75935 186 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 PDGFRAP16234 1089 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 GPC3P51654 580 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 ATXN1P54253 815 aaKnown RBP10.2□□□□□ -0.78
CMC1-209ENST00000477739 AQP5P55064 265 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 BNIP1Q12981 228 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 OLIG2Q13516 323 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 SNX30Q5VWJ9 437 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 PTAR1Q7Z6K3 402 aaPredicted RBP10.2□□□□□ -0.78
CMC1-209ENST00000477739 ZNF354CQ86Y25 554 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 NUDCD3Q8IVD9 361 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 GBP7Q8N8V2 638 aaPredicted RBP10.2□□□□□ -0.78
CMC1-209ENST00000477739 NDRG1Q92597 394 aaKnown RBP10.2□□□□□ -0.78
CMC1-209ENST00000477739 COPS5Q92905 334 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 FAM136AQ96C01 138 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 LRRC19Q9H756 370 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 CITO14578 2027 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 C5orf60A6NFR6 353 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 ITGB3P05106 788 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 FGFR1P11362 822 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 LCP1P13796 627 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 GM2AP17900 193 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 TRABD2AQ86V40 505 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 ABRAQ8N0Z2 381 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 EIF1ADQ8N9N8 165 aaKnown RBP10.2□□□□□ -0.78
CMC1-209ENST00000477739 TMC2Q8TDI7 906 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 TEPSINQ96N21 525 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 NRBP2Q9NSY0 501 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 HMGXB4Q9UGU5 601 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 IP6K2Q9UHH9 426 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 NENFQ9UMX5 172 aa10.2□□□□□ -0.78
CMC1-209ENST00000477739 EXTL3O43909 919 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 NELFEP18615 380 aaKnown RBP10.19□□□□□ -0.78
CMC1-209ENST00000477739 SLC25A3Q00325 362 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 ZC3H12AQ5D1E8 599 aaKnown RBP10.19□□□□□ -0.78
CMC1-209ENST00000477739 CCNJLQ8IV13 435 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 ATP11CQ8NB49 1132 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 RNF169Q8NCN4 708 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 RDM1Q8NG50 284 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 FBXO27Q8NI29 283 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 MORC4Q8TE76 937 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 DEPDC1BQ8WUY9 529 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 SGF29Q96ES7 293 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 RBM41Q96IZ5 413 aaKnown RBP10.19□□□□□ -0.78
CMC1-209ENST00000477739 ROPN1BQ9BZX4 212 aaPredicted RBP10.19□□□□□ -0.78
CMC1-209ENST00000477739 NMUR2Q9GZQ4 415 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 C17orf75Q9HAS0 396 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 ROPN1Q9HAT0 212 aaPredicted RBP10.19□□□□□ -0.78
CMC1-209ENST00000477739 ZC3H7BQ9UGR2 993 aaKnown RBP10.19□□□□□ -0.78
CMC1-209ENST00000477739 LIASO43766 372 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 PRPSAP2O60256 369 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 GGPS1O95749 300 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 ATP6V1B1P15313 513 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 RPL22P35268 128 aaKnown RBP10.19□□□□□ -0.78
CMC1-209ENST00000477739 GRIA1P42261 906 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 GEMIN4P57678 1058 aaKnown RBP10.19□□□□□ -0.78
CMC1-209ENST00000477739 NOMO3P69849 1222 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 PTK6Q13882 451 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms