RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 MAPRE1Q15691 268 aaKnown RBP8.34□□□□□ -1.07
VMA21-203ENST00000477649 TAZQ16635 292 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 EFHC1Q5JVL4 640 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 GLRA4Q5JXX5 417 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 ZFYVE27Q5T4F4 411 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 PPP1R26Q5T8A7 1209 aaPredicted RBP8.34□□□□□ -1.07
VMA21-203ENST00000477649 FAM102AQ5T9C2 384 aaPredicted RBP8.34□□□□□ -1.07
VMA21-203ENST00000477649 SCARA3Q6AZY7 606 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 SPOCD1Q6ZMY3 1216 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 ZNF365Q70YC5 407 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 ACOT1Q86TX2 421 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 METTL23Q86XA0 190 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 PSTKQ8IV42 348 aaKnown RBP8.34□□□□□ -1.07
VMA21-203ENST00000477649 IQCKQ8N0W5 287 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 SLC43A3Q8NBI5 491 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 CMASQ8NFW8 434 aaPredicted RBP8.34□□□□□ -1.07
VMA21-203ENST00000477649 KCTD13Q8WZ19 329 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 NKD2Q969F2 451 aaPredicted RBP8.34□□□□□ -1.07
VMA21-203ENST00000477649 SLITRK1Q96PX8 696 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 SH3GL2Q99962 352 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 TRIM62Q9BVG3 475 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 TRIM7Q9C029 511 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 DCLK3Q9C098 648 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 RSAD1Q9HA92 442 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 PSD3Q9NYI0 1048 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 KANSL3Q9P2N6 904 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 HMGXB4Q9UGU5 601 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 PADI3Q9ULW8 664 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 USTQ9Y2C2 406 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 PTCH2Q9Y6C5 1203 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 CITO14578 2027 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 DOCK3Q8IZD9 2030 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 C2CD4BA6NLJ0 364 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 F8VP50 259 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 GOLGA8SH3BPF8 625 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 CYB561D2O14569 222 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 DAPK3O43293 454 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 PRPSAP2O60256 369 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 AOC2O75106 756 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 PPFIA2O75334 1257 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 LRCH4O75427 683 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 PARNO95453 639 aaKnown RBP8.33□□□□□ -1.08
VMA21-203ENST00000477649 PFKMP08237 780 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 RALAP11233 206 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 ECHS1P30084 290 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 SDC4P31431 198 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 SLC25A11Q02978 314 aaKnown RBP8.33□□□□□ -1.08
VMA21-203ENST00000477649 ZNF252P-AS1Q0IIN9 211 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 BFSP2Q13515 415 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 TRIM71Q2Q1W2 868 aaKnown RBP8.33□□□□□ -1.08
VMA21-203ENST00000477649 C2CD6Q53TS8 623 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 CYP4A22Q5TCH4 519 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 OR6B2Q6IFH4 312 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 TRAF7Q6Q0C0 670 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 OLFML1Q6UWY5 402 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 BBS12Q6ZW61 710 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 SLC26A9Q7LBE3 791 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 PCGF5Q86SE9 256 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 B3GALNT2Q8NCR0 500 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 UBA3Q8TBC4 463 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 KBTBD7Q8WVZ9 684 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 EXOC4Q96A65 974 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 SNF8Q96H20 258 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 DUSP16Q9BY84 665 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 PHACTR1Q9C0D0 580 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 ST7Q9NRC1 585 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 METTL5Q9NRN9 209 aaKnown RBP8.33□□□□□ -1.08
VMA21-203ENST00000477649 ZDHHC18Q9NUE0 388 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 RRN3Q9NYV6 651 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 KLK14Q9P0G3 267 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 CYTH4Q9UIA0 394 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 CDH9Q9ULB4 789 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 PHF24Q9UPV7 400 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 NR2E1Q9Y466 385 aa8.33□□□□□ -1.08
VMA21-203ENST00000477649 GRIN2DO15399 1336 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 hCG_1818297A0A087WSY0 165 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 ESYT3A0FGR9 886 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 LRRD1A4D1F6 860 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 ARL5CA6NH57 179 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 HMGB1P1B2RPK0 211 aaPredicted RBP8.32□□□□□ -1.08
VMA21-203ENST00000477649 KBTBD13C9JR72 458 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 E5RJQ4 531 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 PPEF2O14830 753 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 MDM4O15151 490 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 SPTLC1O15269 473 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 TRPA1O75762 1119 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 ENDOD1O94919 500 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 TRUB2O95900 331 aaKnown RBP8.32□□□□□ -1.08
VMA21-203ENST00000477649 CYP11A1P05108 521 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 ITGAVP06756 1048 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 ODC1P11926 461 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 RARGP13631 454 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 ATF2P15336 505 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 ELNP15502 786 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 PDGFRAP16234 1089 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 ZFXP17010 805 aaPredicted RBP8.32□□□□□ -1.08
VMA21-203ENST00000477649 NPR3P17342 541 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 PTPN1P18031 435 aaKnown RBP8.32□□□□□ -1.08
VMA21-203ENST00000477649 TYMPP19971 482 aa8.32□□□□□ -1.08
VMA21-203ENST00000477649 KDELR1P24390 212 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms