RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.13□□□□□ -1.59
UBR3-209ENST00000477461 CDC42BPAQ5VT25 1732 aa5.13□□□□□ -1.59
UBR3-209ENST00000477461 TSPOAP1O95153 1857 aa5.13□□□□□ -1.59
UBR3-209ENST00000477461 MYOM3Q5VTT5 1437 aa5.13□□□□□ -1.59
UBR3-209ENST00000477461 ABCC10Q5T3U5 1492 aa5.13□□□□□ -1.59
UBR3-209ENST00000477461 ARHGAP5Q13017 1502 aa5.13□□□□□ -1.59
UBR3-209ENST00000477461 GLI2P10070 1586 aa5.12□□□□□ -1.59
UBR3-209ENST00000477461 DIP2BQ9P265 1576 aa5.12□□□□□ -1.59
UBR3-209ENST00000477461 PREX2Q70Z35 1606 aa5.12□□□□□ -1.59
UBR3-209ENST00000477461 KIF13AQ9H1H9 1805 aa5.12□□□□□ -1.59
UBR3-209ENST00000477461 KCNU1A8MYU2 1149 aa5.12□□□□□ -1.59
UBR3-209ENST00000477461 TLR5O60602 858 aa5.12□□□□□ -1.59
UBR3-209ENST00000477461 ARHGAP25P42331 645 aa5.12□□□□□ -1.59
UBR3-209ENST00000477461 SOX8P57073 446 aa5.12□□□□□ -1.59
UBR3-209ENST00000477461 IQCB1Q15051 598 aa5.12□□□□□ -1.59
UBR3-209ENST00000477461 AMOTQ4VCS5 1084 aa5.12□□□□□ -1.59
UBR3-209ENST00000477461 TEDDM1Q5T9Z0 273 aa5.12□□□□□ -1.59
UBR3-209ENST00000477461 SFRP4Q6FHJ7 346 aaPredicted RBP5.12□□□□□ -1.59
UBR3-209ENST00000477461 CHSY1Q86X52 802 aa5.12□□□□□ -1.59
UBR3-209ENST00000477461 CYP2W1Q8TAV3 490 aa5.12□□□□□ -1.59
UBR3-209ENST00000477461 TBC1D5Q92609 795 aa5.12□□□□□ -1.59
UBR3-209ENST00000477461 SLC35A4Q96G79 324 aa5.12□□□□□ -1.59
UBR3-209ENST00000477461 PTDSS2Q9BVG9 487 aa5.12□□□□□ -1.59
UBR3-209ENST00000477461 GLOD4Q9HC38 313 aa5.12□□□□□ -1.59
UBR3-209ENST00000477461 BTBD3Q9Y2F9 522 aa5.12□□□□□ -1.59
UBR3-209ENST00000477461 CD109Q6YHK3 1445 aa5.12□□□□□ -1.59
UBR3-209ENST00000477461 CFAP74Q9C0B2 1584 aa5.12□□□□□ -1.59
UBR3-209ENST00000477461 CDC42BPBQ9Y5S2 1711 aa5.11□□□□□ -1.59
UBR3-209ENST00000477461 A1L4Q6 167 aa5.11□□□□□ -1.59
UBR3-209ENST00000477461 GRPP07492 148 aa5.11□□□□□ -1.59
UBR3-209ENST00000477461 ATXN1LP0C7T5 689 aaKnown RBP5.11□□□□□ -1.59
UBR3-209ENST00000477461 CERS1P27544 350 aa5.11□□□□□ -1.59
UBR3-209ENST00000477461 NKX6-1P78426 367 aaPredicted RBP5.11□□□□□ -1.59
UBR3-209ENST00000477461 HOXA4Q00056 320 aaPredicted RBP5.11□□□□□ -1.59
UBR3-209ENST00000477461 PIN1Q13526 163 aaPredicted RBP5.11□□□□□ -1.59
UBR3-209ENST00000477461 ODR4Q5SWX8 454 aa5.11□□□□□ -1.59
UBR3-209ENST00000477461 LCE1AQ5T7P2 110 aa5.11□□□□□ -1.59
UBR3-209ENST00000477461 SLC9A4Q6AI14 798 aa5.11□□□□□ -1.59
UBR3-209ENST00000477461 WDR53Q7Z5U6 358 aaPredicted RBP5.11□□□□□ -1.59
UBR3-209ENST00000477461 GRAMD1CQ8IYS0 662 aa5.11□□□□□ -1.59
UBR3-209ENST00000477461 C9orf106Q8NAJ2 232 aa5.11□□□□□ -1.59
UBR3-209ENST00000477461 BRIX1Q8TDN6 353 aaKnown RBP5.11□□□□□ -1.59
UBR3-209ENST00000477461 DENND1AQ8TEH3 1009 aa5.11□□□□□ -1.59
UBR3-209ENST00000477461 HOOK2Q96ED9 719 aa5.11□□□□□ -1.59
UBR3-209ENST00000477461 HSPBAP1Q96EW2 488 aa5.11□□□□□ -1.59
UBR3-209ENST00000477461 C5orf34Q96MH7 638 aa5.11□□□□□ -1.59
UBR3-209ENST00000477461 FCRL4Q96PJ5 515 aa5.11□□□□□ -1.59
UBR3-209ENST00000477461 SPRTNQ9H040 489 aaPredicted RBP5.11□□□□□ -1.59
UBR3-209ENST00000477461 PDGFCQ9NRA1 345 aa5.11□□□□□ -1.59
UBR3-209ENST00000477461 STAP2Q9UGK3 403 aa5.11□□□□□ -1.59
UBR3-209ENST00000477461 ADAMTS5Q9UNA0 930 aa5.11□□□□□ -1.59
UBR3-209ENST00000477461 THRAP3Q9Y2W1 955 aaKnown RBP5.11□□□□□ -1.59
UBR3-209ENST00000477461 PLCH2O75038 1416 aa5.11□□□□□ -1.59
UBR3-209ENST00000477461 FGD6Q6ZV73 1430 aa5.11□□□□□ -1.59
UBR3-209ENST00000477461 MIA2Q96PC5 1412 aa5.11□□□□□ -1.59
UBR3-209ENST00000477461 GPATCH8Q9UKJ3 1502 aaKnown RBP5.11□□□□□ -1.59
UBR3-209ENST00000477461 PTPN23Q9H3S7 1636 aa5.11□□□□□ -1.59
UBR3-209ENST00000477461 MAP3K4Q9Y6R4 1608 aa5.11□□□□□ -1.59
UBR3-209ENST00000477461 AKAP10O43572 662 aa5.1□□□□□ -1.59
UBR3-209ENST00000477461 EXOC3O60645 756 aa5.1□□□□□ -1.59
UBR3-209ENST00000477461 RFPL1O75677 317 aa5.1□□□□□ -1.59
UBR3-209ENST00000477461 BMP15O95972 392 aa5.1□□□□□ -1.59
UBR3-209ENST00000477461 S100BP04271 92 aaPredicted RBP5.1□□□□□ -1.59
UBR3-209ENST00000477461 ALDH2P05091 517 aa5.1□□□□□ -1.59
UBR3-209ENST00000477461 IGKV2-30P06310 120 aa5.1□□□□□ -1.59
UBR3-209ENST00000477461 SFPQP23246 707 aaKnown RBP eCLIP5.1□□□□□ -1.59
UBR3-209ENST00000477461 AKAP5P24588 427 aa5.1□□□□□ -1.59
UBR3-209ENST00000477461 PTGER1P34995 402 aa5.1□□□□□ -1.59
UBR3-209ENST00000477461 E2F2Q14209 437 aa5.1□□□□□ -1.59
UBR3-209ENST00000477461 DEPDC1Q5TB30 811 aa5.1□□□□□ -1.59
UBR3-209ENST00000477461 PARS2Q7L3T8 475 aaKnown RBP5.1□□□□□ -1.59
UBR3-209ENST00000477461 ZNF280BQ86YH2 543 aa5.1□□□□□ -1.59
UBR3-209ENST00000477461 TEX14Q8IWB6 1497 aa5.1□□□□□ -1.59
UBR3-209ENST00000477461 ARAP3Q8WWN8 1544 aa5.1□□□□□ -1.59
UBR3-209ENST00000477461 MVB12AQ96EY5 273 aa5.1□□□□□ -1.59
UBR3-209ENST00000477461 FAM167AQ96KS9 214 aa5.1□□□□□ -1.59
UBR3-209ENST00000477461 ZNF48Q96MX3 618 aaPredicted RBP5.1□□□□□ -1.59
UBR3-209ENST00000477461 SEMA4CQ9C0C4 833 aa5.1□□□□□ -1.59
UBR3-209ENST00000477461 CDH19Q9H159 772 aa5.1□□□□□ -1.59
UBR3-209ENST00000477461 METTL14Q9HCE5 456 aaKnown RBP5.1□□□□□ -1.59
UBR3-209ENST00000477461 SARS2Q9NP81 518 aaKnown RBP5.1□□□□□ -1.59
UBR3-209ENST00000477461 AASDHPPTQ9NRN7 309 aa5.1□□□□□ -1.59
UBR3-209ENST00000477461 XPR1Q9UBH6 696 aa5.1□□□□□ -1.59
UBR3-209ENST00000477461 PNMA8BQ9ULN7 279 aaPredicted RBP5.1□□□□□ -1.59
UBR3-209ENST00000477461 NDRG4Q9ULP0 352 aaKnown RBP5.1□□□□□ -1.59
UBR3-209ENST00000477461 ANKRD6Q9Y2G4 727 aa5.1□□□□□ -1.59
UBR3-209ENST00000477461 FANCAO15360 1455 aa5.09□□□□□ -1.59
UBR3-209ENST00000477461 CAMSAP2Q08AD1 1489 aa5.09□□□□□ -1.59
UBR3-209ENST00000477461 PLEKHH2Q8IVE3 1493 aa5.09□□□□□ -1.59
UBR3-209ENST00000477461 RRBP1Q9P2E9 1410 aaKnown RBP5.09□□□□□ -1.59
UBR3-209ENST00000477461 SMIM35A0A1B0GVV1 85 aa5.09□□□□□ -1.59
UBR3-209ENST00000477461 PPM1GO15355 546 aaPredicted RBP5.09□□□□□ -1.59
UBR3-209ENST00000477461 ONECUT2O95948 504 aa5.09□□□□□ -1.59
UBR3-209ENST00000477461 ADORA2AP29274 412 aa5.09□□□□□ -1.59
UBR3-209ENST00000477461 LOXL3P58215 753 aa5.09□□□□□ -1.59
UBR3-209ENST00000477461 NFE2Q16621 373 aaPredicted RBP5.09□□□□□ -1.59
UBR3-209ENST00000477461 L1TD1Q5T7N2 865 aaKnown RBP5.09□□□□□ -1.59
UBR3-209ENST00000477461 MORN5Q5VZ52 161 aa5.09□□□□□ -1.59
UBR3-209ENST00000477461 FCRL6Q6DN72 434 aa5.09□□□□□ -1.59
UBR3-209ENST00000477461 CATSPERGQ6ZRH7 1159 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms