RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 CNGA2Q16280 664 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 TAF3Q5VWG9 929 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 PTCRAQ6ISU1 281 aaPredicted RBP16.81■□□□□ 0.28
COPS3-207ENST00000477299 LCLAT1Q6UWP7 414 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 NOP9Q86U38 636 aaKnown RBP16.81■□□□□ 0.28
COPS3-207ENST00000477299 VSTM4Q8IW00 320 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 ANKRD52Q8NB46 1076 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 ITFG1Q8TB96 612 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 SLC20A1Q8WUM9 679 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 SMARCD1Q96GM5 515 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 C8orf48Q96LL4 319 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 ZNF512Q96ME7 567 aaPredicted RBP16.81■□□□□ 0.28
COPS3-207ENST00000477299 SPAG5Q96R06 1193 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 CSNK1G1Q9HCP0 422 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 DPP7Q9UHL4 492 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 CYTH4Q9UIA0 394 aa16.81■□□□□ 0.28
COPS3-207ENST00000477299 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.81■□□□□ 0.28
COPS3-207ENST00000477299 LRRC53A6NM62 1247 aa16.8■□□□□ 0.28
COPS3-207ENST00000477299 PIK3R2O00459 728 aa16.8■□□□□ 0.28
COPS3-207ENST00000477299 RHOP08100 348 aa16.8■□□□□ 0.28
COPS3-207ENST00000477299 MYL4P12829 197 aa16.8■□□□□ 0.28
COPS3-207ENST00000477299 CHRNB2P17787 502 aa16.8■□□□□ 0.28
COPS3-207ENST00000477299 RFX1P22670 979 aa16.8■□□□□ 0.28
COPS3-207ENST00000477299 ZNF75DP51815 510 aa16.8■□□□□ 0.28
COPS3-207ENST00000477299 RPL10AP62906 217 aaKnown RBP16.8■□□□□ 0.28
COPS3-207ENST00000477299 ITIH3Q06033 890 aa16.8■□□□□ 0.28
COPS3-207ENST00000477299 SMAD4Q13485 552 aaKnown RBP16.8■□□□□ 0.28
COPS3-207ENST00000477299 ATAT1Q5SQI0 421 aa16.8■□□□□ 0.28
COPS3-207ENST00000477299 CES5AQ6NT32 575 aa16.8■□□□□ 0.28
COPS3-207ENST00000477299 GAREM2Q75VX8 874 aa16.8■□□□□ 0.28
COPS3-207ENST00000477299 CACNA2D4Q7Z3S7 1137 aa16.8■□□□□ 0.28
COPS3-207ENST00000477299 TMEM150AQ86TG1 271 aa16.8■□□□□ 0.28
COPS3-207ENST00000477299 PASD1Q8IV76 773 aa16.8■□□□□ 0.28
COPS3-207ENST00000477299 WDTC1Q8N5D0 677 aa16.8■□□□□ 0.28
COPS3-207ENST00000477299 ING5Q8WYH8 240 aa16.8■□□□□ 0.28
COPS3-207ENST00000477299 DDX1Q92499 740 aaKnown RBP16.8■□□□□ 0.28
COPS3-207ENST00000477299 PSMG2Q969U7 264 aa16.8■□□□□ 0.28
COPS3-207ENST00000477299 ANP32EQ9BTT0 268 aa16.8■□□□□ 0.28
COPS3-207ENST00000477299 IL21Q9HBE4 155 aa16.8■□□□□ 0.28
COPS3-207ENST00000477299 DMAP1Q9NPF5 467 aaPredicted RBP16.8■□□□□ 0.28
COPS3-207ENST00000477299 THEGQ9P2T0 379 aa16.8■□□□□ 0.28
COPS3-207ENST00000477299 KIAA1257Q9ULG3 409 aa16.8■□□□□ 0.28
COPS3-207ENST00000477299 CBFA2T2O43439 604 aa16.79■□□□□ 0.28
COPS3-207ENST00000477299 XYLBO75191 536 aa16.79■□□□□ 0.28
COPS3-207ENST00000477299 GYPCP04921 128 aa16.79■□□□□ 0.28
COPS3-207ENST00000477299 CYP11B1P15538 503 aa16.79■□□□□ 0.28
COPS3-207ENST00000477299 NPR3P17342 541 aa16.79■□□□□ 0.28
COPS3-207ENST00000477299 CASP14P31944 242 aa16.79■□□□□ 0.28
COPS3-207ENST00000477299 STAT1P42224 750 aa16.79■□□□□ 0.28
COPS3-207ENST00000477299 RGS7P49802 495 aa16.79■□□□□ 0.28
COPS3-207ENST00000477299 PTK2Q05397 1052 aa16.79■□□□□ 0.28
COPS3-207ENST00000477299 CBX2Q14781 532 aaPredicted RBP16.79■□□□□ 0.28
COPS3-207ENST00000477299 STXBP5Q5T5C0 1151 aa16.79■□□□□ 0.28
COPS3-207ENST00000477299 PMF1Q6P1K2 205 aa16.79■□□□□ 0.28
COPS3-207ENST00000477299 ELMSAN1Q6PJG2 1045 aa16.79■□□□□ 0.28
COPS3-207ENST00000477299 RTL10Q7L3V2 364 aa16.79■□□□□ 0.28
COPS3-207ENST00000477299 IRF2BP2Q7Z5L9 587 aa16.79■□□□□ 0.28
COPS3-207ENST00000477299 PIGZQ86VD9 579 aa16.79■□□□□ 0.28
COPS3-207ENST00000477299 NDRG1Q92597 394 aaKnown RBP16.79■□□□□ 0.28
COPS3-207ENST00000477299 SECISBP2LQ93073 1101 aaKnown RBP16.79■□□□□ 0.28
COPS3-207ENST00000477299 SPATA17Q96L03 361 aa16.79■□□□□ 0.28
COPS3-207ENST00000477299 WDR6Q9NNW5 1121 aaKnown RBP16.79■□□□□ 0.28
COPS3-207ENST00000477299 ATP8B3O60423 1300 aa16.78■□□□□ 0.28
COPS3-207ENST00000477299 M0QYV0 167 aa16.78■□□□□ 0.28
COPS3-207ENST00000477299 TRIM66O15016 1216 aa16.78■□□□□ 0.28
COPS3-207ENST00000477299 TADA3O75528 432 aa16.78■□□□□ 0.28
COPS3-207ENST00000477299 F11P03951 625 aa16.78■□□□□ 0.28
COPS3-207ENST00000477299 MMEP08473 750 aa16.78■□□□□ 0.28
COPS3-207ENST00000477299 SKILP12757 684 aa16.78■□□□□ 0.28
COPS3-207ENST00000477299 ANXA13P27216 316 aa16.78■□□□□ 0.28
COPS3-207ENST00000477299 GPD2P43304 727 aa16.78■□□□□ 0.28
COPS3-207ENST00000477299 SMAD2Q15796 467 aaKnown RBP16.78■□□□□ 0.28
COPS3-207ENST00000477299 PABPC1LQ4VXU2 614 aaKnown RBP16.78■□□□□ 0.28
COPS3-207ENST00000477299 PRSS36Q5K4E3 855 aa16.78■□□□□ 0.28
COPS3-207ENST00000477299 DENND5BQ6ZUT9 1274 aa16.78■□□□□ 0.28
COPS3-207ENST00000477299 OLIG1Q8TAK6 271 aa16.78■□□□□ 0.28
COPS3-207ENST00000477299 SHKBP1Q8TBC3 707 aa16.78■□□□□ 0.28
COPS3-207ENST00000477299 SLC35F5Q8WV83 523 aa16.78■□□□□ 0.28
COPS3-207ENST00000477299 TJP2Q9UDY2 1190 aa16.78■□□□□ 0.28
COPS3-207ENST00000477299 CHORDC1Q9UHD1 332 aaPredicted RBP16.78■□□□□ 0.28
COPS3-207ENST00000477299 NOCTQ9UK39 431 aaKnown RBP16.78■□□□□ 0.28
COPS3-207ENST00000477299 CLUHO75153 1309 aa16.77■□□□□ 0.28
COPS3-207ENST00000477299 A0A1W2PRU2 124 aa16.77■□□□□ 0.28
COPS3-207ENST00000477299 POU2F2P09086 479 aa16.77■□□□□ 0.28
COPS3-207ENST00000477299 BMP1P13497 986 aa16.77■□□□□ 0.28
COPS3-207ENST00000477299 CEBPBP17676 345 aa16.77■□□□□ 0.28
COPS3-207ENST00000477299 MTHFRP42898 656 aa16.77■□□□□ 0.28
COPS3-207ENST00000477299 SLC5A3P53794 718 aa16.77■□□□□ 0.28
COPS3-207ENST00000477299 EPHA5P54756 1037 aa16.77■□□□□ 0.28
COPS3-207ENST00000477299 CYP4F8P98187 520 aa16.77■□□□□ 0.28
COPS3-207ENST00000477299 BST2Q10589 180 aaKnown RBP16.77■□□□□ 0.28
COPS3-207ENST00000477299 TEAD2Q15562 447 aa16.77■□□□□ 0.28
COPS3-207ENST00000477299 TMC6Q7Z403 805 aa16.77■□□□□ 0.28
COPS3-207ENST00000477299 NUP93Q8N1F7 819 aa16.77■□□□□ 0.28
COPS3-207ENST00000477299 ELMOD1Q8N336 334 aa16.77■□□□□ 0.28
COPS3-207ENST00000477299 EPS8L1Q8TE68 723 aa16.77■□□□□ 0.28
COPS3-207ENST00000477299 RIPOR3Q96MK2 946 aa16.77■□□□□ 0.28
COPS3-207ENST00000477299 ZSWIM3Q96MP5 696 aa16.77■□□□□ 0.28
COPS3-207ENST00000477299 MYADMQ96S97 322 aa16.77■□□□□ 0.28
COPS3-207ENST00000477299 PCDHB18PQ96TA0 734 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms