RNA–Protein interactions for RNA: ENST00000477057.5

FDPS-211, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-211ENST00000477057 PCMTD1Q96MG8 357 aaPredicted RBP13.41□□□□□ -0.26
FDPS-211ENST00000477057 ASB16Q96NS5 453 aa13.41□□□□□ -0.26
FDPS-211ENST00000477057 SLITRK1Q96PX8 696 aa13.41□□□□□ -0.26
FDPS-211ENST00000477057 RPP25Q9BUL9 199 aaKnown RBP13.41□□□□□ -0.26
FDPS-211ENST00000477057 VPS16Q9H269 839 aa13.41□□□□□ -0.26
FDPS-211ENST00000477057 NDST4Q9H3R1 872 aa13.41□□□□□ -0.26
FDPS-211ENST00000477057 TASP1Q9H6P5 420 aa13.41□□□□□ -0.26
FDPS-211ENST00000477057 FANCLQ9NW38 375 aa13.41□□□□□ -0.26
FDPS-211ENST00000477057 TRPM5Q9NZQ8 1165 aa13.41□□□□□ -0.26
FDPS-211ENST00000477057 HESX1Q9UBX0 185 aa13.41□□□□□ -0.26
FDPS-211ENST00000477057 DUSP12Q9UNI6 340 aa13.41□□□□□ -0.26
FDPS-211ENST00000477057 TMEM221A6NGB7 291 aa13.4□□□□□ -0.26
FDPS-211ENST00000477057 BECN2A8MW95 431 aa13.4□□□□□ -0.26
FDPS-211ENST00000477057 ANHXE9PGG2 379 aa13.4□□□□□ -0.26
FDPS-211ENST00000477057 M0R296 226 aa13.4□□□□□ -0.26
FDPS-211ENST00000477057 PMM2O15305 246 aa13.4□□□□□ -0.26
FDPS-211ENST00000477057 MICAL2O94851 1124 aa13.4□□□□□ -0.26
FDPS-211ENST00000477057 RTN3O95197 1032 aaPredicted RBP13.4□□□□□ -0.26
FDPS-211ENST00000477057 CKMP06732 381 aa13.4□□□□□ -0.26
FDPS-211ENST00000477057 SLC9A1P19634 815 aa13.4□□□□□ -0.26
FDPS-211ENST00000477057 EEF1GP26641 437 aaKnown RBP13.4□□□□□ -0.26
FDPS-211ENST00000477057 YWHAQP27348 245 aa13.4□□□□□ -0.26
FDPS-211ENST00000477057 MFAP3P55082 362 aa13.4□□□□□ -0.26
FDPS-211ENST00000477057 MCCD1P59942 119 aaPredicted RBP13.4□□□□□ -0.26
FDPS-211ENST00000477057 SIGLEC14Q08ET2 396 aa13.4□□□□□ -0.26
FDPS-211ENST00000477057 FKBP15Q5T1M5 1219 aa13.4□□□□□ -0.26
FDPS-211ENST00000477057 GJB7Q6PEY0 223 aa13.4□□□□□ -0.26
FDPS-211ENST00000477057 TRIM65Q6PJ69 517 aa13.4□□□□□ -0.26
FDPS-211ENST00000477057 TRIM67Q6ZTA4 783 aa13.4□□□□□ -0.26
FDPS-211ENST00000477057 PAQR9Q6ZVX9 377 aa13.4□□□□□ -0.26
FDPS-211ENST00000477057 ARID3BQ8IVW6 561 aaPredicted RBP13.4□□□□□ -0.26
FDPS-211ENST00000477057 TRMT2BQ96GJ1 504 aaKnown RBP13.4□□□□□ -0.26
FDPS-211ENST00000477057 HNRNPABQ99729 332 aaKnown RBP13.4□□□□□ -0.26
FDPS-211ENST00000477057 SMOQ99835 787 aa13.4□□□□□ -0.26
FDPS-211ENST00000477057 NACA2Q9H009 215 aa13.4□□□□□ -0.26
FDPS-211ENST00000477057 BRD9Q9H8M2 597 aa13.4□□□□□ -0.26
FDPS-211ENST00000477057 IL21Q9HBE4 155 aa13.4□□□□□ -0.26
FDPS-211ENST00000477057 TMEM30AQ9NV96 361 aa13.4□□□□□ -0.26
FDPS-211ENST00000477057 NOTCH4Q99466 2003 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 TRAV19A0A0A6YYK7 116 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 HEPACAM2A8MVW5 462 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 ECI2O75521 394 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 BEST1O76090 585 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 CALCAP01258 141 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 F11P03951 625 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 SRFP11831 508 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 NPR3P17342 541 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 DDX6P26196 483 aaKnown RBP eCLIP13.39□□□□□ -0.27
FDPS-211ENST00000477057 GDI1P31150 447 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 APBA1Q02410 837 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 GCNT1Q02742 428 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 TAF10Q12962 218 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 SKOR2Q2VWA4 1001 aaPredicted RBP13.39□□□□□ -0.27
FDPS-211ENST00000477057 PHLDB3Q6NSJ2 640 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 CLEC20AQ6ZU45 233 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 SIX5Q8N196 739 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 FLCNQ8NFG4 579 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 SCAMP5Q8TAC9 235 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 LMO3Q8TAP4 145 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 PBXIP1Q96AQ6 731 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 ELSPBP1Q96BH3 223 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 TRMT61BQ9BVS5 477 aaKnown RBP13.39□□□□□ -0.27
FDPS-211ENST00000477057 LSM14BQ9BX40 385 aaKnown RBP13.39□□□□□ -0.27
FDPS-211ENST00000477057 PLA2G2FQ9BZM2 168 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 TSPAN16Q9UKR8 245 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 PTPRDP23468 1912 aa13.39□□□□□ -0.27
FDPS-211ENST00000477057 DOCK8Q8NF50 2099 aa13.38□□□□□ -0.27
FDPS-211ENST00000477057 MYH10P35580 1976 aa13.38□□□□□ -0.27
FDPS-211ENST00000477057 C2orf78A6NCI8 922 aa13.38□□□□□ -0.27
FDPS-211ENST00000477057 SMTNL1A8MU46 457 aa13.38□□□□□ -0.27
FDPS-211ENST00000477057 M0QYV0 167 aa13.38□□□□□ -0.27
FDPS-211ENST00000477057 ZNF263O14978 683 aa13.38□□□□□ -0.27
FDPS-211ENST00000477057 TADA3O75528 432 aa13.38□□□□□ -0.27
FDPS-211ENST00000477057 PRAMEF12O95522 483 aa13.38□□□□□ -0.27
FDPS-211ENST00000477057 USP17L7P0C7H9 530 aa13.38□□□□□ -0.27
FDPS-211ENST00000477057 VDRP11473 427 aa13.38□□□□□ -0.27
FDPS-211ENST00000477057 ACO1P21399 889 aaKnown RBP13.38□□□□□ -0.27
FDPS-211ENST00000477057 FCARP24071 287 aa13.38□□□□□ -0.27
FDPS-211ENST00000477057 BRD2P25440 801 aaKnown RBP13.38□□□□□ -0.27
FDPS-211ENST00000477057 GPC5P78333 572 aa13.38□□□□□ -0.27
FDPS-211ENST00000477057 RAPGEF1Q13905 1077 aa13.38□□□□□ -0.27
FDPS-211ENST00000477057 KRT31Q15323 416 aa13.38□□□□□ -0.27
FDPS-211ENST00000477057 VITQ6UXI7 678 aa13.38□□□□□ -0.27
FDPS-211ENST00000477057 SUGP1Q8IWZ8 645 aaKnown RBP13.38□□□□□ -0.27
FDPS-211ENST00000477057 CMTM8Q8IZV2 173 aa13.38□□□□□ -0.27
FDPS-211ENST00000477057 ARL14EPQ8N8R7 260 aaPredicted RBP13.38□□□□□ -0.27
FDPS-211ENST00000477057 PDZD8Q8NEN9 1154 aa13.38□□□□□ -0.27
FDPS-211ENST00000477057 CEP295NLQ96MC4 621 aa13.38□□□□□ -0.27
FDPS-211ENST00000477057 SLC46A2Q9BY10 475 aa13.38□□□□□ -0.27
FDPS-211ENST00000477057 FAM124BQ9H5Z6 455 aaPredicted RBP13.38□□□□□ -0.27
FDPS-211ENST00000477057 GMIPQ9P107 970 aa13.38□□□□□ -0.27
FDPS-211ENST00000477057 APEX2Q9UBZ4 518 aa13.38□□□□□ -0.27
FDPS-211ENST00000477057 PSMC3P17980 439 aa13.37□□□□□ -0.27
FDPS-211ENST00000477057 PON1P27169 355 aa13.37□□□□□ -0.27
FDPS-211ENST00000477057 ZNF165P49910 485 aa13.37□□□□□ -0.27
FDPS-211ENST00000477057 PDE6CP51160 858 aa13.37□□□□□ -0.27
FDPS-211ENST00000477057 BCAT1P54687 386 aa13.37□□□□□ -0.27
FDPS-211ENST00000477057 TPM4P67936 248 aa13.37□□□□□ -0.27
FDPS-211ENST00000477057 PFKPQ01813 784 aa13.37□□□□□ -0.27
FDPS-211ENST00000477057 MIIPQ5JXC2 388 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms