RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 CLIC6Q96NY7 704 aa12.83□□□□□ -0.36
HDAC6-219ENST00000476625 ACBD6Q9BR61 282 aa12.83□□□□□ -0.36
HDAC6-219ENST00000476625 RBAKQ9NYW8 714 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-219ENST00000476625 MMP17Q9ULZ9 603 aa12.83□□□□□ -0.36
HDAC6-219ENST00000476625 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-219ENST00000476625 GABRDO14764 452 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 TRIM24O15164 1050 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 HUS1O60921 280 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 ADAM23O75077 832 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 IL18RAPO95256 599 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 ABL1P00519 1130 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 PDGFRBP09619 1106 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 MYL7Q01449 175 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 CYP27A1Q02318 531 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 SMARCB1Q12824 385 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 CRY1Q16526 586 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 USP39Q53GS9 565 aaKnown RBP12.82□□□□□ -0.36
HDAC6-219ENST00000476625 TRIM61Q5EBN2 209 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 DAB2IPQ5VWQ8 1189 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 SLFN12LQ6IEE8 588 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 FAM173BQ6P4H8 233 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 IL17RCQ8NAC3 791 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 KDF1Q8NAX2 398 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-219ENST00000476625 OLIG1Q8TAK6 271 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 ZCCHC14Q8WYQ9 949 aaKnown RBP12.82□□□□□ -0.36
HDAC6-219ENST00000476625 DNAJC19Q96DA6 116 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 TMX3Q96JJ7 454 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 AK8Q96MA6 479 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 SYT15Q9BQS2 421 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 DPEP3Q9H4B8 488 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 ST6GALNAC4Q9H4F1 302 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 TMEM206Q9H813 350 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 MRPL44Q9H9J2 332 aaKnown RBP12.82□□□□□ -0.36
HDAC6-219ENST00000476625 CD93Q9NPY3 652 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 UXTQ9UBK9 157 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-219ENST00000476625 ARHGAP26Q9UNA1 814 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 CPQQ9Y646 472 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 CLIC4Q9Y696 253 aa12.82□□□□□ -0.36
HDAC6-219ENST00000476625 ASCC3Q8N3C0 2202 aaKnown RBP12.81□□□□□ -0.36
HDAC6-219ENST00000476625 A0A087X0B3 334 aa12.81□□□□□ -0.36
HDAC6-219ENST00000476625 PRPF6O94906 941 aaKnown RBP12.81□□□□□ -0.36
HDAC6-219ENST00000476625 GCNT3O95395 438 aa12.81□□□□□ -0.36
HDAC6-219ENST00000476625 ENGP17813 658 aa12.81□□□□□ -0.36
HDAC6-219ENST00000476625 PAX3P23760 479 aa12.81□□□□□ -0.36
HDAC6-219ENST00000476625 WASP42768 502 aa12.81□□□□□ -0.36
HDAC6-219ENST00000476625 AMPD2Q01433 879 aa12.81□□□□□ -0.36
HDAC6-219ENST00000476625 C8orf34Q49A92 452 aa12.81□□□□□ -0.36
HDAC6-219ENST00000476625 L1TD1Q5T7N2 865 aaKnown RBP12.81□□□□□ -0.36
HDAC6-219ENST00000476625 FAM171BQ6P995 826 aa12.81□□□□□ -0.36
HDAC6-219ENST00000476625 NAT16Q8N8M0 369 aa12.81□□□□□ -0.36
HDAC6-219ENST00000476625 HMGB4Q8WW32 186 aa12.81□□□□□ -0.36
HDAC6-219ENST00000476625 MRPL45Q9BRJ2 306 aaKnown RBP12.81□□□□□ -0.36
HDAC6-219ENST00000476625 TRIM9Q9C026 710 aa12.81□□□□□ -0.36
HDAC6-219ENST00000476625 ABCB6Q9NP58 842 aa12.81□□□□□ -0.36
HDAC6-219ENST00000476625 PPP4R2Q9NY27 417 aa12.81□□□□□ -0.36
HDAC6-219ENST00000476625 CFAP97Q9P2B7 532 aa12.81□□□□□ -0.36
HDAC6-219ENST00000476625 ZMYM5Q9UJ78 669 aa12.81□□□□□ -0.36
HDAC6-219ENST00000476625 HCN2Q9UL51 889 aa12.81□□□□□ -0.36
HDAC6-219ENST00000476625 ZZEF1O43149 2961 aa12.81□□□□□ -0.36
HDAC6-219ENST00000476625 TCRBV21S2A2A0A5A6 115 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 CLDN5O00501 218 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 NFATC1O95644 943 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 CEACAM1P13688 526 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 CSRP1P21291 193 aaKnown RBP12.8□□□□□ -0.36
HDAC6-219ENST00000476625 ITPKAP23677 461 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 GRIK1P39086 918 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 P2RY2P41231 377 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 PNPLA4P41247 253 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 RING1Q06587 406 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 DHCR24Q15392 516 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 MAP7D1Q3KQU3 841 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 CFAP221Q4G0U5 840 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 MDH1BQ5I0G3 518 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 RHBDF2Q6PJF5 856 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 CBWD2Q8IUF1 395 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 TMEM86AQ8N2M4 240 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 PHTF2Q8N3S3 785 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 KCTD17Q8N5Z5 321 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 TOP6BLQ8N6T0 577 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 KRI1Q8N9T8 703 aaKnown RBP12.8□□□□□ -0.36
HDAC6-219ENST00000476625 PCED1BQ96HM7 432 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 PANK2Q9BZ23 570 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 SLC6A17Q9H1V8 727 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 GDAP2Q9NXN4 497 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 MAGEC2Q9UBF1 373 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-219ENST00000476625 ADAMTS20P59510 1910 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 PLXNB3Q9ULL4 1909 aa12.8□□□□□ -0.36
HDAC6-219ENST00000476625 F8VP50 259 aa12.79□□□□□ -0.36
HDAC6-219ENST00000476625 TAF4O00268 1085 aa12.79□□□□□ -0.36
HDAC6-219ENST00000476625 KAT7O95251 611 aa12.79□□□□□ -0.36
HDAC6-219ENST00000476625 CFIP05156 583 aa12.79□□□□□ -0.36
HDAC6-219ENST00000476625 TMEM191BP0C7N4 346 aa12.79□□□□□ -0.36
HDAC6-219ENST00000476625 IDEP14735 1019 aa12.79□□□□□ -0.36
HDAC6-219ENST00000476625 LONP1P36776 959 aaKnown RBP12.79□□□□□ -0.36
HDAC6-219ENST00000476625 KIR2DL1P43626 348 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-219ENST00000476625 PGFP49763 221 aa12.79□□□□□ -0.36
HDAC6-219ENST00000476625 MIB1Q86YT6 1006 aa12.79□□□□□ -0.36
HDAC6-219ENST00000476625 ADGRG2Q8IZP9 1017 aa12.79□□□□□ -0.36
HDAC6-219ENST00000476625 PGBD3Q8N328 593 aa12.79□□□□□ -0.36
HDAC6-219ENST00000476625 LRRC52Q8N7C0 313 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms