RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 MAGEA4P43358 317 aa16.77■□□□□ 0.27
VARS2-207ENST00000476162 DGKDQ16760 1214 aa16.77■□□□□ 0.27
VARS2-207ENST00000476162 FAM102AQ5T9C2 384 aaPredicted RBP16.77■□□□□ 0.27
VARS2-207ENST00000476162 CYP4F22Q6NT55 531 aa16.77■□□□□ 0.27
VARS2-207ENST00000476162 ANKRD23Q86SG2 305 aa16.77■□□□□ 0.27
VARS2-207ENST00000476162 PNMA8AQ86V59 439 aaPredicted RBP16.77■□□□□ 0.27
VARS2-207ENST00000476162 ZNF410Q86VK4 478 aa16.77■□□□□ 0.27
VARS2-207ENST00000476162 SLC35B2Q8TB61 432 aa16.77■□□□□ 0.27
VARS2-207ENST00000476162 SEC16BQ96JE7 1060 aa16.77■□□□□ 0.27
VARS2-207ENST00000476162 ZNF317Q96PQ6 595 aaPredicted RBP16.77■□□□□ 0.27
VARS2-207ENST00000476162 PRMT1Q99873 361 aaKnown RBP16.77■□□□□ 0.27
VARS2-207ENST00000476162 TINF2Q9BSI4 451 aa16.77■□□□□ 0.27
VARS2-207ENST00000476162 HOXD8P13378 290 aaPredicted RBP16.76■□□□□ 0.27
VARS2-207ENST00000476162 MIPP30301 263 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 GRM5P41594 1212 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 OTUD4Q01804 1114 aaKnown RBP16.76■□□□□ 0.27
VARS2-207ENST00000476162 MYO1EQ12965 1108 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 TAF5Q15542 800 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 C12orf29Q8N999 325 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 ACTL9Q8TC94 416 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 MICAL1Q8TDZ2 1067 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 FOXP3Q9BZS1 431 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 FAM49AQ9H0Q0 323 aaPredicted RBP16.76■□□□□ 0.27
VARS2-207ENST00000476162 ABHD16BQ9H3Z7 469 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 C10orf88Q9H8K7 445 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 EFR3BQ9Y2G0 817 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 UNCXA6NJT0 531 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 DNM1LO00429 736 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 TCEA3O75764 348 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 RNF8O76064 485 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 NPTXRO95502 500 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 PECAM1P16284 738 aaPredicted RBP16.76■□□□□ 0.27
VARS2-207ENST00000476162 HOXA11P31270 313 aaPredicted RBP16.76■□□□□ 0.27
VARS2-207ENST00000476162 CCDC121Q6ZUS5 278 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 NT5DC4Q86YG4 428 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 KCTD6Q8NC69 237 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 NPLOC4Q8TAT6 608 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 NT5C1AQ9BXI3 368 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 SAYSD1Q9NPB0 183 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 HAUS2Q9NVX0 235 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 TSPAN16Q9UKR8 245 aa16.76■□□□□ 0.27
VARS2-207ENST00000476162 STAU1O95793 577 aaKnown RBP16.75■□□□□ 0.27
VARS2-207ENST00000476162 TAZQ16635 292 aa16.75■□□□□ 0.27
VARS2-207ENST00000476162 SH3PXD2AQ5TCZ1 1133 aa16.75■□□□□ 0.27
VARS2-207ENST00000476162 LCLAT1Q6UWP7 414 aa16.75■□□□□ 0.27
VARS2-207ENST00000476162 BBS12Q6ZW61 710 aa16.75■□□□□ 0.27
VARS2-207ENST00000476162 CYP4X1Q8N118 509 aa16.75■□□□□ 0.27
VARS2-207ENST00000476162 HSPH1Q92598 858 aa16.75■□□□□ 0.27
VARS2-207ENST00000476162 SPDL1Q96EA4 605 aa16.75■□□□□ 0.27
VARS2-207ENST00000476162 RSRC1Q96IZ7 334 aaKnown RBP16.75■□□□□ 0.27
VARS2-207ENST00000476162 ZMAT2Q96NC0 199 aaKnown RBP16.75■□□□□ 0.27
VARS2-207ENST00000476162 OSBPL7Q9BZF2 842 aa16.75■□□□□ 0.27
VARS2-207ENST00000476162 ADAMTS10Q9H324 1103 aa16.75■□□□□ 0.27
VARS2-207ENST00000476162 CDHR5Q9HBB8 845 aa16.75■□□□□ 0.27
VARS2-207ENST00000476162 PCDH9Q9HC56 1237 aa16.75■□□□□ 0.27
VARS2-207ENST00000476162 SNTG2Q9NY99 539 aa16.75■□□□□ 0.27
VARS2-207ENST00000476162 TBK1Q9UHD2 729 aa16.75■□□□□ 0.27
VARS2-207ENST00000476162 USP18Q9UMW8 372 aa16.75■□□□□ 0.27
VARS2-207ENST00000476162 MGRN1O60291 552 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 ATP5DP30049 168 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 IFNAR2P48551 515 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 MORF4L2Q15014 288 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 HP1BP3Q5SSJ5 553 aaPredicted RBP16.74■□□□□ 0.27
VARS2-207ENST00000476162 RNASEH2BQ5TBB1 312 aaKnown RBP16.74■□□□□ 0.27
VARS2-207ENST00000476162 GKAP1Q5VSY0 366 aaPredicted RBP16.74■□□□□ 0.27
VARS2-207ENST00000476162 IQSEC1Q6DN90 963 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 CEP128Q6ZU80 1094 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 PLEKHH3Q7Z736 793 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 CMASQ8NFW8 434 aaPredicted RBP16.74■□□□□ 0.27
VARS2-207ENST00000476162 PIWIL1Q96J94 861 aaKnown RBP16.74■□□□□ 0.27
VARS2-207ENST00000476162 PTPN18Q99952 460 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 TMEM120BA0PK00 339 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 E5RJQ4 531 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 PPEF2O14830 753 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 TRUB2O95900 331 aaKnown RBP16.74■□□□□ 0.27
VARS2-207ENST00000476162 PFKMP08237 780 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 ZNF143P52747 638 aaPredicted RBP16.74■□□□□ 0.27
VARS2-207ENST00000476162 GDF10P55107 478 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 STAT4Q14765 748 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 FASTKD3Q14CZ7 662 aaKnown RBP16.74■□□□□ 0.27
VARS2-207ENST00000476162 ACAP1Q15027 740 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 DCAF4L1Q3SXM0 396 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 OR6B2Q6IFH4 312 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 TRNP1Q6NT89 227 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 CACNA2D3Q8IZS8 1091 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 CCDC77Q9BR77 488 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 EIF2AQ9BY44 585 aaKnown RBP16.74■□□□□ 0.27
VARS2-207ENST00000476162 ASNSD1Q9NWL6 643 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 KIAA1257Q9ULG3 409 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 NAALADL1Q9UQQ1 740 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 HES2Q9Y543 173 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 SNX9Q9Y5X1 595 aa16.74■□□□□ 0.27
VARS2-207ENST00000476162 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.74■□□□□ 0.27
VARS2-207ENST00000476162 KAT6AQ92794 2004 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 DYNC1LI2O43237 492 aaPredicted RBP16.73■□□□□ 0.27
VARS2-207ENST00000476162 XRCC4Q13426 336 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 LRRC14Q15048 493 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 SPRED3Q2MJR0 410 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 RAB6CQ53S08 254 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 PRAMEF19Q5SWL8 479 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms