RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 FNIP1Q8TF40 1166 aa9.37□□□□□ -0.91
CCDC66-216ENST00000476142 RXFP2Q8WXD0 754 aa9.37□□□□□ -0.91
CCDC66-216ENST00000476142 C18orf25Q96B23 403 aaPredicted RBP9.37□□□□□ -0.91
CCDC66-216ENST00000476142 LENG1Q96BZ8 264 aaPredicted RBP9.37□□□□□ -0.91
CCDC66-216ENST00000476142 MCRS1Q96EZ8 462 aa9.37□□□□□ -0.91
CCDC66-216ENST00000476142 PAIP2Q9BPZ3 127 aaKnown RBP9.37□□□□□ -0.91
CCDC66-216ENST00000476142 CDHR5Q9HBB8 845 aa9.37□□□□□ -0.91
CCDC66-216ENST00000476142 ATXN2Q99700 1313 aaKnown RBP9.36□□□□□ -0.91
CCDC66-216ENST00000476142 C5orf60A6NFR6 353 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 TCP11X1B4DZS4 312 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 RASA4BC9J798 803 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 MCF2LO15068 1137 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 RASA4O43374 803 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 GRM5P41594 1212 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 NRLP54845 237 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 KRT81Q14533 505 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 VSTM1Q6UX27 236 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 NPNTQ6UXI9 565 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 BBS12Q6ZW61 710 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 CENPUQ71F23 418 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 PLEKHH3Q7Z736 793 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 ZNF410Q86VK4 478 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 ZC3H18Q86VM9 953 aaKnown RBP9.36□□□□□ -0.91
CCDC66-216ENST00000476142 PACS2Q86VP3 889 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 TTC13Q8NBP0 860 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 OR6B3Q8NGW1 331 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 NPLOC4Q8TAT6 608 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.36□□□□□ -0.91
CCDC66-216ENST00000476142 ZMAT2Q96NC0 199 aaKnown RBP9.36□□□□□ -0.91
CCDC66-216ENST00000476142 PEBP4Q96S96 227 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 LPIN3Q9BQK8 851 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 GCOM2Q9BZD3 368 aaPredicted RBP9.36□□□□□ -0.91
CCDC66-216ENST00000476142 FOXP3Q9BZS1 431 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 MIS12Q9H081 205 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 VRTNQ9H8Y1 702 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 NGRNQ9NPE2 291 aaKnown RBP9.36□□□□□ -0.91
CCDC66-216ENST00000476142 PRPSAP2O60256 369 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 AKAP5P24588 427 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 RDXP35241 583 aaKnown RBP9.36□□□□□ -0.91
CCDC66-216ENST00000476142 GABRB2P47870 512 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 ZNF143P52747 638 aaPredicted RBP9.36□□□□□ -0.91
CCDC66-216ENST00000476142 BASP1P80723 227 aaKnown RBP9.36□□□□□ -0.91
CCDC66-216ENST00000476142 INCA1Q0VD86 236 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 GRB14Q14449 540 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 ZKSCAN8Q15776 578 aaPredicted RBP9.36□□□□□ -0.91
CCDC66-216ENST00000476142 GPR162Q16538 588 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 HIF1AQ16665 826 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 DCAF4L1Q3SXM0 396 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 PPP1R26Q5T8A7 1209 aaPredicted RBP9.36□□□□□ -0.91
CCDC66-216ENST00000476142 ANKRD22Q5VYY1 191 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 FBXW10Q5XX13 1052 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 DARS2Q6PI48 645 aaKnown RBP9.36□□□□□ -0.91
CCDC66-216ENST00000476142 C1orf228Q6PIY5 440 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 LCLAT1Q6UWP7 414 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 C6orf89Q6UWU4 347 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 ZNF467Q7Z7K2 595 aaPredicted RBP9.36□□□□□ -0.91
CCDC66-216ENST00000476142 PNMA8AQ86V59 439 aaPredicted RBP9.36□□□□□ -0.91
CCDC66-216ENST00000476142 UNC45BQ8IWX7 931 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 C7orf31Q8N865 590 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 ANKS4BQ8N8V4 417 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 SPATA18Q8TC71 538 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 PRCCQ92733 491 aaPredicted RBP9.36□□□□□ -0.91
CCDC66-216ENST00000476142 NSRP1Q9H0G5 558 aaKnown RBP9.36□□□□□ -0.91
CCDC66-216ENST00000476142 ABHD16BQ9H3Z7 469 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 NXF3Q9H4D5 531 aaKnown RBP9.36□□□□□ -0.91
CCDC66-216ENST00000476142 GPATCH2LQ9NWQ4 482 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 NKIRAS1Q9NYS0 192 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 KLK14Q9P0G3 267 aa9.36□□□□□ -0.91
CCDC66-216ENST00000476142 HCRTO43612 131 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 SPAG7O75391 227 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 PIAS1O75925 651 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 PDGFRBP09619 1106 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 SMIM10L2AP0DMW4 78 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 SMIM10L2BP0DMW5 78 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 KRT15P19012 456 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 STX2P32856 288 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 MPP2Q14168 576 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 TRNP1Q6NT89 227 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 SLC27A1Q6PCB7 646 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 YTHDF3Q7Z739 585 aaKnown RBP9.35□□□□□ -0.91
CCDC66-216ENST00000476142 ANKRD23Q86SG2 305 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 SCUBE3Q8IX30 993 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 FAXDC2Q96IV6 333 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 TTC25Q96NG3 672 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 PARK7Q99497 189 aaKnown RBP9.35□□□□□ -0.91
CCDC66-216ENST00000476142 CNPY3Q9BT09 278 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 FGFR1OP2Q9NVK5 253 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 MORF4L1Q9UBU8 362 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 GGA2Q9UJY4 613 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 SHOC2Q9UQ13 582 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 C2CD4BA6NLJ0 364 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 TCEA3O75764 348 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 MAP3K6O95382 1288 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 PFKMP08237 780 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 RBP3P10745 1247 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 CYP2C9P11712 490 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 HOXA11P31270 313 aaPredicted RBP9.35□□□□□ -0.91
CCDC66-216ENST00000476142 RPL22P35268 128 aaKnown RBP9.35□□□□□ -0.91
CCDC66-216ENST00000476142 PMF1Q6P1K2 205 aa9.35□□□□□ -0.91
CCDC66-216ENST00000476142 APBB1IPQ7Z5R6 666 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms