RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 FAM173BQ6P4H8 233 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 CBWD2Q8IUF1 395 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 PDILTQ8N807 584 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 KIAA1958Q8N8K9 716 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 OR5B17Q8NGF7 314 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 USP33Q8TEY7 942 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 PCED1BQ96HM7 432 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 TTLL2Q9BWV7 592 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 PANK2Q9BZ23 570 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 TNMDQ9H2S6 317 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 LINC00597Q9H2U6 94 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 CRTAC1Q9NQ79 661 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 HSPBP1Q9NZL4 362 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 KIAA1549LQ6ZVL6 1849 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 PTPRJQ12913 1337 aa11.57□□□□□ -0.56
CDRT1-205ENST00000475944 A0A087X0B3 334 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 LEFTY2O00292 366 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 ACACBO00763 2458 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 SLC9A3R1O14745 358 aaPredicted RBP11.56□□□□□ -0.56
CDRT1-205ENST00000475944 EIF3DO15371 548 aaKnown RBP eCLIP11.56□□□□□ -0.56
CDRT1-205ENST00000475944 KCNK5O95279 499 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 SYT1P21579 422 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 OPRD1P41143 372 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 SEC13P55735 322 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 USP46P62068 366 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 NOP14P78316 857 aaKnown RBP11.56□□□□□ -0.56
CDRT1-205ENST00000475944 SLC7A9P82251 487 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 MRPS21P82921 87 aaKnown RBP11.56□□□□□ -0.56
CDRT1-205ENST00000475944 AMPD3Q01432 767 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 C2orf27AQ580R0 203 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 DAB2IPQ5VWQ8 1189 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 PMS2CLQ68D20 193 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 TCEAL6Q6IPX3 200 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 ANO7Q6IWH7 933 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 HS2ST1Q7LGA3 356 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 TRAPPC11Q7Z392 1133 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 RASSF3Q86WH2 238 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 MYCBPAPQ8TBZ2 947 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 TCEAL3Q969E4 200 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 CNOT6LQ96LI5 555 aaKnown RBP11.56□□□□□ -0.56
CDRT1-205ENST00000475944 USP28Q96RU2 1077 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 TPSD1Q9BZJ3 242 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 SNX25Q9H3E2 840 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 CUEDC2Q9H467 287 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 ZSCAN16Q9H4T2 348 aaPredicted RBP11.56□□□□□ -0.56
CDRT1-205ENST00000475944 MMP17Q9ULZ9 603 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 MYO16Q9Y6X6 1858 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 ATG2BQ96BY7 2078 aa11.56□□□□□ -0.56
CDRT1-205ENST00000475944 KMT2BQ9UMN6 2715 aaPredicted RBP11.56□□□□□ -0.56
CDRT1-205ENST00000475944 TPRP12270 2363 aaKnown RBP11.55□□□□□ -0.56
CDRT1-205ENST00000475944 ZNF840PA6NDX5 716 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 F8VP50 259 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 K7EQS6 105 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 TACC1O75410 805 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 ALDH1A2O94788 518 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 ABL1P00519 1130 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 CYP17A1P05093 508 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 FAM163BP0C2L3 166 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 DLATP10515 647 aaKnown RBP11.55□□□□□ -0.56
CDRT1-205ENST00000475944 TNNI1P19237 187 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 GNL1P36915 607 aaPredicted RBP11.55□□□□□ -0.56
CDRT1-205ENST00000475944 EIF2DP41214 584 aaKnown RBP11.55□□□□□ -0.56
CDRT1-205ENST00000475944 TNNC1P63316 161 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 ZXDBP98169 803 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 CRY1Q16526 586 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 SNRNP35Q16560 246 aaKnown RBP11.55□□□□□ -0.56
CDRT1-205ENST00000475944 HSF5Q4G112 596 aaPredicted RBP11.55□□□□□ -0.56
CDRT1-205ENST00000475944 MDH1BQ5I0G3 518 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 TDRD10Q5VZ19 366 aaKnown RBP11.55□□□□□ -0.56
CDRT1-205ENST00000475944 PSAPL1Q6NUJ1 521 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 CYP2U1Q7Z449 544 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 FILIP1Q7Z7B0 1213 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 DDX42Q86XP3 938 aaKnown RBP eCLIP11.55□□□□□ -0.56
CDRT1-205ENST00000475944 GLIS3Q8NEA6 775 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 OR6B3Q8NGW1 331 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 C8orf48Q96LL4 319 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 SLITRK1Q96PX8 696 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 FNBP1Q96RU3 617 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 TRIM9Q9C026 710 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 ELOVL4Q9GZR5 314 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 INVSQ9Y283 1065 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 CPQQ9Y646 472 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 EPG5Q9HCE0 2579 aa11.55□□□□□ -0.56
CDRT1-205ENST00000475944 LNP1A1A4G5 178 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 C4orf47A7E2U8 309 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 KHNYNO15037 678 aaKnown RBP11.54□□□□□ -0.56
CDRT1-205ENST00000475944 OLFM2O95897 454 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 ADH1CP00326 375 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 OAS1P00973 400 aaKnown RBP11.54□□□□□ -0.56
CDRT1-205ENST00000475944 PTPN1P18031 435 aaKnown RBP11.54□□□□□ -0.56
CDRT1-205ENST00000475944 NASPP49321 788 aaPredicted RBP11.54□□□□□ -0.56
CDRT1-205ENST00000475944 NOVA1P51513 510 aaKnown RBP11.54□□□□□ -0.56
CDRT1-205ENST00000475944 ASIC1P78348 528 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 TAF10Q12962 218 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 PSMD6Q15008 389 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 STK38Q15208 465 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 DHCR24Q15392 516 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 GAB4Q2WGN9 574 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 WDR72Q3MJ13 1102 aa11.54□□□□□ -0.56
CDRT1-205ENST00000475944 ADGRG2Q8IZP9 1017 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms