RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 TICRRQ7Z2Z1 1910 aa16.64■□□□□ 0.26
CPSF3-203ENST00000475482 VPS13AQ96RL7 3174 aa16.64■□□□□ 0.25
CPSF3-203ENST00000475482 ARNTLO00327 626 aa16.64■□□□□ 0.25
CPSF3-203ENST00000475482 DLATP10515 647 aaKnown RBP16.64■□□□□ 0.25
CPSF3-203ENST00000475482 WARSP23381 471 aaKnown RBP16.64■□□□□ 0.25
CPSF3-203ENST00000475482 GABRR2P28476 465 aa16.64■□□□□ 0.25
CPSF3-203ENST00000475482 PCSK1P29120 753 aa16.64■□□□□ 0.25
CPSF3-203ENST00000475482 GTF2H1P32780 548 aa16.64■□□□□ 0.25
CPSF3-203ENST00000475482 NBL1P41271 181 aa16.64■□□□□ 0.25
CPSF3-203ENST00000475482 VIPR2P41587 438 aa16.64■□□□□ 0.25
CPSF3-203ENST00000475482 MCCD1P59942 119 aaPredicted RBP16.64■□□□□ 0.25
CPSF3-203ENST00000475482 VEPH1Q14D04 833 aa16.64■□□□□ 0.25
CPSF3-203ENST00000475482 CFAP221Q4G0U5 840 aa16.64■□□□□ 0.25
CPSF3-203ENST00000475482 STXBP5Q5T5C0 1151 aa16.64■□□□□ 0.25
CPSF3-203ENST00000475482 TMEM150AQ86TG1 271 aa16.64■□□□□ 0.25
CPSF3-203ENST00000475482 FNBP1Q96RU3 617 aa16.64■□□□□ 0.25
CPSF3-203ENST00000475482 TRMT61BQ9BVS5 477 aaKnown RBP16.64■□□□□ 0.25
CPSF3-203ENST00000475482 MMRN2Q9H8L6 949 aa16.64■□□□□ 0.25
CPSF3-203ENST00000475482 LUC7L2Q9Y383 392 aaKnown RBP16.64■□□□□ 0.25
CPSF3-203ENST00000475482 KIF26AQ9ULI4 1882 aaPredicted RBP16.64■□□□□ 0.25
CPSF3-203ENST00000475482 ANAPC1Q9H1A4 1944 aa16.64■□□□□ 0.25
CPSF3-203ENST00000475482 FAM186AA6NE01 2351 aa16.64■□□□□ 0.25
CPSF3-203ENST00000475482 DMDP11532 3685 aa16.64■□□□□ 0.25
CPSF3-203ENST00000475482 PTPRZ1P23471 2315 aaPredicted RBP16.63■□□□□ 0.25
CPSF3-203ENST00000475482 A0A1W2PQJ5 194 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 STK25O00506 426 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 PMM2O15305 246 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 HCRTO43612 131 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 TACC1O75410 805 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 F11P03951 625 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 TNNI1P19237 187 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 ACAT1P24752 427 aaKnown RBP16.63■□□□□ 0.25
CPSF3-203ENST00000475482 LMO2P25791 158 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 FMO5P49326 533 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 CDR1P51861 262 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 FCHO2Q0JRZ9 810 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 GRM2Q14416 872 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 EXOC3L4Q17RC7 722 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 ARID3BQ8IVW6 561 aaPredicted RBP16.63■□□□□ 0.25
CPSF3-203ENST00000475482 ZNF687Q8N1G0 1237 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 PARD3BQ8TEW8 1205 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 ATOH1Q92858 354 aaPredicted RBP16.63■□□□□ 0.25
CPSF3-203ENST00000475482 IRF7Q92985 503 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 CCDC127Q96BQ5 260 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 FUBP3Q96I24 572 aaKnown RBP eCLIP16.63■□□□□ 0.25
CPSF3-203ENST00000475482 PANX2Q96RD6 677 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 NAA15Q9BXJ9 866 aaKnown RBP16.63■□□□□ 0.25
CPSF3-203ENST00000475482 XYLT2Q9H1B5 865 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 NUCKS1Q9H1E3 243 aaKnown RBP16.63■□□□□ 0.25
CPSF3-203ENST00000475482 ATXN3LQ9H3M9 355 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 TASP1Q9H6P5 420 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 VRTNQ9H8Y1 702 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 FAM86C1Q9NVL1 165 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 OBP2AQ9NY56 170 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 GTF3C4Q9UKN8 822 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 CAPN11Q9UMQ6 739 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 SIK3Q9Y2K2 1263 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 NME7Q9Y5B8 376 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 ZNF638Q14966 1978 aaKnown RBP16.63■□□□□ 0.25
CPSF3-203ENST00000475482 PATJQ8NI35 1801 aa16.63■□□□□ 0.25
CPSF3-203ENST00000475482 MYBPHLA2RUH7 354 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 SOBPA7XYQ1 873 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 HEPACAM2A8MVW5 462 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 DCNP07585 359 aaKnown RBP16.62■□□□□ 0.25
CPSF3-203ENST00000475482 MSNP26038 577 aaKnown RBP16.62■□□□□ 0.25
CPSF3-203ENST00000475482 CDC25CP30307 473 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 CASP14P31944 242 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 MAGEA11P43364 429 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 MLLT6P55198 1093 aaPredicted RBP16.62■□□□□ 0.25
CPSF3-203ENST00000475482 FZD5Q13467 585 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 ANGPT1Q15389 498 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 CCDC142Q17RM4 750 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 ZSCAN30Q86W11 494 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 GIPC2Q8TF65 315 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 CLDN23Q96B33 292 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 MYRFLQ96LU7 910 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 LRRC3BQ96PB8 259 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 NELL2Q99435 816 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 PI4K2AQ9BTU6 479 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 BRD9Q9H8M2 597 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 LTB4R2Q9NPC1 389 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 PLCB1Q9NQ66 1216 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 HEBP1Q9NRV9 189 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 ZNHIT6Q9NWK9 470 aaKnown RBP16.62■□□□□ 0.25
CPSF3-203ENST00000475482 ZMYM5Q9UJ78 669 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 CDH9Q9ULB4 789 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 ZKSCAN5Q9Y2L8 839 aa16.62■□□□□ 0.25
CPSF3-203ENST00000475482 R3HCC1Q9Y3T6 440 aaKnown RBP16.62■□□□□ 0.25
CPSF3-203ENST00000475482 MTF2Q9Y483 593 aaPredicted RBP16.62■□□□□ 0.25
CPSF3-203ENST00000475482 TULP1O00294 542 aaPredicted RBP16.61■□□□□ 0.25
CPSF3-203ENST00000475482 MFAP3LO75121 409 aa16.61■□□□□ 0.25
CPSF3-203ENST00000475482 ATP2C2O75185 946 aa16.61■□□□□ 0.25
CPSF3-203ENST00000475482 LRRN2O75325 713 aa16.61■□□□□ 0.25
CPSF3-203ENST00000475482 NOL4O94818 638 aa16.61■□□□□ 0.25
CPSF3-203ENST00000475482 C4BPAP04003 597 aaKnown RBP16.61■□□□□ 0.25
CPSF3-203ENST00000475482 GYPCP04921 128 aa16.61■□□□□ 0.25
CPSF3-203ENST00000475482 CSH1P0DML2 217 aa16.61■□□□□ 0.25
CPSF3-203ENST00000475482 CSH2P0DML3 217 aa16.61■□□□□ 0.25
CPSF3-203ENST00000475482 CYP2F1P24903 491 aa16.61■□□□□ 0.25
CPSF3-203ENST00000475482 GDI1P31150 447 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms