RNA–Protein interactions for RNA: ENST00000475467.1

TTC38-206, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-206ENST00000475467 TNFRSF10BO14763 440 aa13.2□□□□□ -0.3
TTC38-206ENST00000475467 TACC1O75410 805 aa13.2□□□□□ -0.3
TTC38-206ENST00000475467 OLFM2O95897 454 aa13.2□□□□□ -0.3
TTC38-206ENST00000475467 ADH1CP00326 375 aa13.2□□□□□ -0.3
TTC38-206ENST00000475467 APODP05090 189 aa13.2□□□□□ -0.3
TTC38-206ENST00000475467 IDEP14735 1019 aa13.2□□□□□ -0.3
TTC38-206ENST00000475467 ACAT1P24752 427 aaKnown RBP13.2□□□□□ -0.3
TTC38-206ENST00000475467 RDXP35241 583 aaKnown RBP13.2□□□□□ -0.3
TTC38-206ENST00000475467 TNFRSF4P43489 277 aa13.2□□□□□ -0.3
TTC38-206ENST00000475467 AMPD3Q01432 767 aa13.2□□□□□ -0.3
TTC38-206ENST00000475467 SDHAF4Q5VUM1 108 aa13.2□□□□□ -0.3
TTC38-206ENST00000475467 TDRD10Q5VZ19 366 aaKnown RBP13.2□□□□□ -0.3
TTC38-206ENST00000475467 CYP2U1Q7Z449 544 aa13.2□□□□□ -0.3
TTC38-206ENST00000475467 ADGRG2Q8IZP9 1017 aa13.2□□□□□ -0.3
TTC38-206ENST00000475467 STKLD1Q8NE28 680 aa13.2□□□□□ -0.3
TTC38-206ENST00000475467 WHAMMQ8TF30 809 aa13.2□□□□□ -0.3
TTC38-206ENST00000475467 SAAL1Q96ER3 474 aa13.2□□□□□ -0.3
TTC38-206ENST00000475467 PNKPQ96T60 521 aa13.2□□□□□ -0.3
TTC38-206ENST00000475467 ELOVL4Q9GZR5 314 aa13.2□□□□□ -0.3
TTC38-206ENST00000475467 CUEDC2Q9H467 287 aa13.2□□□□□ -0.3
TTC38-206ENST00000475467 SLC32A1Q9H598 525 aa13.2□□□□□ -0.3
TTC38-206ENST00000475467 PDE11AQ9HCR9 933 aa13.2□□□□□ -0.3
TTC38-206ENST00000475467 PANK4Q9NVE7 773 aa13.2□□□□□ -0.3
TTC38-206ENST00000475467 NUP205Q92621 2012 aa13.2□□□□□ -0.3
TTC38-206ENST00000475467 LNP1A1A4G5 178 aa13.19□□□□□ -0.3
TTC38-206ENST00000475467 K7EQS6 105 aa13.19□□□□□ -0.3
TTC38-206ENST00000475467 LEFTY2O00292 366 aa13.19□□□□□ -0.3
TTC38-206ENST00000475467 EIF3DO15371 548 aaKnown RBP eCLIP13.19□□□□□ -0.3
TTC38-206ENST00000475467 RTN3O95197 1032 aaPredicted RBP13.19□□□□□ -0.3
TTC38-206ENST00000475467 STAT6P42226 847 aa13.19□□□□□ -0.3
TTC38-206ENST00000475467 GRIA2P42262 883 aa13.19□□□□□ -0.3
TTC38-206ENST00000475467 GRIN1Q05586 938 aa13.19□□□□□ -0.3
TTC38-206ENST00000475467 KCNA1Q09470 495 aa13.19□□□□□ -0.3
TTC38-206ENST00000475467 HNRNPDQ14103 355 aaKnown RBP13.19□□□□□ -0.3
TTC38-206ENST00000475467 CCDC6Q16204 474 aa13.19□□□□□ -0.3
TTC38-206ENST00000475467 PSAPL1Q6NUJ1 521 aa13.19□□□□□ -0.3
TTC38-206ENST00000475467 LPCAT2Q7L5N7 544 aa13.19□□□□□ -0.3
TTC38-206ENST00000475467 OSTM1Q86WC4 334 aa13.19□□□□□ -0.3
TTC38-206ENST00000475467 KDF1Q8NAX2 398 aaPredicted RBP13.19□□□□□ -0.3
TTC38-206ENST00000475467 OLIG1Q8TAK6 271 aa13.19□□□□□ -0.3
TTC38-206ENST00000475467 CEP76Q8TAP6 659 aa13.19□□□□□ -0.3
TTC38-206ENST00000475467 RIN3Q8TB24 985 aa13.19□□□□□ -0.3
TTC38-206ENST00000475467 EZH1Q92800 747 aaPredicted RBP13.19□□□□□ -0.3
TTC38-206ENST00000475467 SLC22A12Q96S37 553 aa13.19□□□□□ -0.3
TTC38-206ENST00000475467 NUSAP1Q9BXS6 441 aaKnown RBP13.19□□□□□ -0.3
TTC38-206ENST00000475467 MTMR12Q9C0I1 747 aa13.19□□□□□ -0.3
TTC38-206ENST00000475467 COMMD8Q9NX08 183 aa13.19□□□□□ -0.3
TTC38-206ENST00000475467 CGNQ9P2M7 1197 aaKnown RBP13.19□□□□□ -0.3
TTC38-206ENST00000475467 SIX4Q9UIU6 781 aa13.19□□□□□ -0.3
TTC38-206ENST00000475467 FBXO2Q9UK22 296 aaPredicted RBP13.19□□□□□ -0.3
TTC38-206ENST00000475467 ABCA7Q8IZY2 2146 aa13.18□□□□□ -0.3
TTC38-206ENST00000475467 E2F8A0AVK6 867 aa13.18□□□□□ -0.3
TTC38-206ENST00000475467 C2orf78A6NCI8 922 aa13.18□□□□□ -0.3
TTC38-206ENST00000475467 ZNF840PA6NDX5 716 aa13.18□□□□□ -0.3
TTC38-206ENST00000475467 UPK3BL1B0FP48 263 aa13.18□□□□□ -0.3
TTC38-206ENST00000475467 UPK3BL2E5RIL1 263 aa13.18□□□□□ -0.3
TTC38-206ENST00000475467 ZBTB24O43167 697 aaPredicted RBP13.18□□□□□ -0.3
TTC38-206ENST00000475467 PRPF6O94906 941 aaKnown RBP13.18□□□□□ -0.3
TTC38-206ENST00000475467 STAU1O95793 577 aaKnown RBP13.18□□□□□ -0.3
TTC38-206ENST00000475467 BDNFP23560 247 aa13.18□□□□□ -0.3
TTC38-206ENST00000475467 ATICP31939 592 aa13.18□□□□□ -0.3
TTC38-206ENST00000475467 GNL1P36915 607 aaPredicted RBP13.18□□□□□ -0.3
TTC38-206ENST00000475467 OPRD1P41143 372 aa13.18□□□□□ -0.3
TTC38-206ENST00000475467 SYT12Q8IV01 421 aa13.18□□□□□ -0.3
TTC38-206ENST00000475467 MYLPFQ96A32 169 aa13.18□□□□□ -0.3
TTC38-206ENST00000475467 PCED1BQ96HM7 432 aa13.18□□□□□ -0.3
TTC38-206ENST00000475467 FNBP1Q96RU3 617 aa13.18□□□□□ -0.3
TTC38-206ENST00000475467 MMS19Q96T76 1030 aa13.18□□□□□ -0.3
TTC38-206ENST00000475467 CBWD1Q9BRT8 395 aa13.18□□□□□ -0.3
TTC38-206ENST00000475467 TNMDQ9H2S6 317 aa13.18□□□□□ -0.3
TTC38-206ENST00000475467 LINC00597Q9H2U6 94 aa13.18□□□□□ -0.3
TTC38-206ENST00000475467 SNX25Q9H3E2 840 aa13.18□□□□□ -0.3
TTC38-206ENST00000475467 THADAQ6YHU6 1953 aa13.18□□□□□ -0.3
TTC38-206ENST00000475467 ATP8B3O60423 1300 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 H0Y626 953 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 MAP3K13O43283 966 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 TRIM16O95361 564 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 OAS1P00973 400 aaKnown RBP13.17□□□□□ -0.3
TTC38-206ENST00000475467 TUBP50607 506 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 AP3M2P53677 418 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 CYP27A1Q02318 531 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 GAD2Q05329 585 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 ZNF252P-AS1Q0IIN9 211 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 DHCR24Q15392 516 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 C2orf27AQ580R0 203 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 SH3PXD2AQ5TCZ1 1133 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 SNX30Q5VWJ9 437 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 BTBD8Q5XKL5 378 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 ANO7Q6IWH7 933 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 SLC23A3Q6PIS1 610 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 UNQ6494/PRO21346Q6UXR6 183 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 SLC36A4Q6YBV0 504 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 NUP93Q8N1F7 819 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 MDGA1Q8NFP4 955 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 KBTBD7Q8WVZ9 684 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 ZSCAN16Q9H4T2 348 aaPredicted RBP13.17□□□□□ -0.3
TTC38-206ENST00000475467 CRTAC1Q9NQ79 661 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 TBC1D7Q9P0N9 293 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 CLIC4Q9Y696 253 aa13.17□□□□□ -0.3
TTC38-206ENST00000475467 HELZP42694 1942 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms