RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 A0A0A0MRY4 1105 aa19.25■□□□□ 0.67
RNF220-212ENST00000475378 ADAM23O75077 832 aa19.25■□□□□ 0.67
RNF220-212ENST00000475378 CFIP05156 583 aa19.25■□□□□ 0.67
RNF220-212ENST00000475378 ACAT1P24752 427 aaKnown RBP19.25■□□□□ 0.67
RNF220-212ENST00000475378 TIE1P35590 1138 aa19.25■□□□□ 0.67
RNF220-212ENST00000475378 GTF2BQ00403 316 aa19.25■□□□□ 0.67
RNF220-212ENST00000475378 POU5F1Q01860 360 aaKnown RBP19.25■□□□□ 0.67
RNF220-212ENST00000475378 KCNB1Q14721 858 aa19.25■□□□□ 0.67
RNF220-212ENST00000475378 EMC10Q5UCC4 262 aa19.25■□□□□ 0.67
RNF220-212ENST00000475378 CRELD2Q6UXH1 353 aaPredicted RBP19.25■□□□□ 0.67
RNF220-212ENST00000475378 MYCT1Q8N699 235 aa19.25■□□□□ 0.67
RNF220-212ENST00000475378 FSIP1Q8NA03 581 aa19.25■□□□□ 0.67
RNF220-212ENST00000475378 GTPBP2Q9BX10 602 aaKnown RBP19.25■□□□□ 0.67
RNF220-212ENST00000475378 POLMQ9NP87 494 aaPredicted RBP19.25■□□□□ 0.67
RNF220-212ENST00000475378 DDX43Q9NXZ2 648 aaKnown RBP19.25■□□□□ 0.67
RNF220-212ENST00000475378 GTF3C4Q9UKN8 822 aa19.25■□□□□ 0.67
RNF220-212ENST00000475378 CIZ1Q9ULV3 898 aaPredicted RBP19.25■□□□□ 0.67
RNF220-212ENST00000475378 HELZ2Q9BYK8 2649 aaKnown RBP19.25■□□□□ 0.67
RNF220-212ENST00000475378 LEFTY2O00292 366 aa19.24■□□□□ 0.67
RNF220-212ENST00000475378 OPHN1O60890 802 aa19.24■□□□□ 0.67
RNF220-212ENST00000475378 SERPINF2P08697 491 aa19.24■□□□□ 0.67
RNF220-212ENST00000475378 EIF2DP41214 584 aaKnown RBP19.24■□□□□ 0.67
RNF220-212ENST00000475378 SLC6A11P48066 632 aa19.24■□□□□ 0.67
RNF220-212ENST00000475378 ATXN3P54252 364 aaPredicted RBP19.24■□□□□ 0.67
RNF220-212ENST00000475378 BYSLQ13895 437 aaKnown RBP19.24■□□□□ 0.67
RNF220-212ENST00000475378 HNRNPDQ14103 355 aaKnown RBP19.24■□□□□ 0.67
RNF220-212ENST00000475378 COL28A1Q2UY09 1125 aa19.24■□□□□ 0.67
RNF220-212ENST00000475378 EOGTQ5NDL2 527 aa19.24■□□□□ 0.67
RNF220-212ENST00000475378 ADALQ6DHV7 355 aa19.24■□□□□ 0.67
RNF220-212ENST00000475378 OSTM1Q86WC4 334 aa19.24■□□□□ 0.67
RNF220-212ENST00000475378 C12orf40Q86WS4 652 aa19.24■□□□□ 0.67
RNF220-212ENST00000475378 ADGRG2Q8IZP9 1017 aa19.24■□□□□ 0.67
RNF220-212ENST00000475378 MINDY1Q8N5J2 469 aa19.24■□□□□ 0.67
RNF220-212ENST00000475378 KIAA1958Q8N8K9 716 aa19.24■□□□□ 0.67
RNF220-212ENST00000475378 CEP76Q8TAP6 659 aa19.24■□□□□ 0.67
RNF220-212ENST00000475378 SPATA18Q8TC71 538 aa19.24■□□□□ 0.67
RNF220-212ENST00000475378 HMGB4Q8WW32 186 aa19.24■□□□□ 0.67
RNF220-212ENST00000475378 PARVGQ9HBI0 331 aa19.24■□□□□ 0.67
RNF220-212ENST00000475378 BCCIPQ9P287 314 aaKnown RBP eCLIP19.24■□□□□ 0.67
RNF220-212ENST00000475378 MYMKA6NI61 221 aa19.23■□□□□ 0.67
RNF220-212ENST00000475378 TRAK2O60296 914 aa19.23■□□□□ 0.67
RNF220-212ENST00000475378 KAT7O95251 611 aa19.23■□□□□ 0.67
RNF220-212ENST00000475378 PFKLP17858 780 aa19.23■□□□□ 0.67
RNF220-212ENST00000475378 PNPLA4P41247 253 aa19.23■□□□□ 0.67
RNF220-212ENST00000475378 WNT7BP56706 349 aa19.23■□□□□ 0.67
RNF220-212ENST00000475378 ATP2C1P98194 919 aaPredicted RBP19.23■□□□□ 0.67
RNF220-212ENST00000475378 GFPT1Q06210 699 aaPredicted RBP19.23■□□□□ 0.67
RNF220-212ENST00000475378 DHCR24Q15392 516 aa19.23■□□□□ 0.67
RNF220-212ENST00000475378 FILIP1Q7Z7B0 1213 aa19.23■□□□□ 0.67
RNF220-212ENST00000475378 NT5DC4Q86YG4 428 aa19.23■□□□□ 0.67
RNF220-212ENST00000475378 OR2I1PQ8NGU4 316 aa19.23■□□□□ 0.67
RNF220-212ENST00000475378 COL26A1Q96A83 441 aa19.23■□□□□ 0.67
RNF220-212ENST00000475378 FUBP3Q96I24 572 aaKnown RBP eCLIP19.23■□□□□ 0.67
RNF220-212ENST00000475378 PNKPQ96T60 521 aa19.23■□□□□ 0.67
RNF220-212ENST00000475378 ZDHHC4Q9NPG8 344 aa19.23■□□□□ 0.67
RNF220-212ENST00000475378 DNAAF2Q9NVR5 837 aaKnown RBP19.23■□□□□ 0.67
RNF220-212ENST00000475378 AGO2Q9UKV8 859 aaKnown RBP19.23■□□□□ 0.67
RNF220-212ENST00000475378 FLNBO75369 2602 aaKnown RBP19.23■□□□□ 0.67
RNF220-212ENST00000475378 TCRBV21S2A2A0A5A6 115 aa19.22■□□□□ 0.67
RNF220-212ENST00000475378 AP5Z1O43299 807 aa19.22■□□□□ 0.67
RNF220-212ENST00000475378 HCRTO43612 131 aa19.22■□□□□ 0.67
RNF220-212ENST00000475378 FAM13AO94988 1023 aa19.22■□□□□ 0.67
RNF220-212ENST00000475378 MAGEA11P43364 429 aa19.22■□□□□ 0.67
RNF220-212ENST00000475378 PDE6CP51160 858 aa19.22■□□□□ 0.67
RNF220-212ENST00000475378 HMGN5P82970 282 aaKnown RBP19.22■□□□□ 0.67
RNF220-212ENST00000475378 MYL7Q01449 175 aa19.22■□□□□ 0.67
RNF220-212ENST00000475378 SCARA3Q6AZY7 606 aa19.22■□□□□ 0.67
RNF220-212ENST00000475378 GPBP1Q86WP2 473 aa19.22■□□□□ 0.67
RNF220-212ENST00000475378 SPATA2LQ8IUW3 424 aaPredicted RBP19.22■□□□□ 0.67
RNF220-212ENST00000475378 SCN4BQ8IWT1 228 aa19.22■□□□□ 0.67
RNF220-212ENST00000475378 TMEM86AQ8N2M4 240 aa19.22■□□□□ 0.67
RNF220-212ENST00000475378 PHTF2Q8N3S3 785 aa19.22■□□□□ 0.67
RNF220-212ENST00000475378 CXorf38Q8TB03 319 aa19.22■□□□□ 0.67
RNF220-212ENST00000475378 ADAMTS14Q8WXS8 1223 aa19.22■□□□□ 0.67
RNF220-212ENST00000475378 CDK5RAP3Q96JB5 506 aa19.22■□□□□ 0.67
RNF220-212ENST00000475378 CAMK1GQ96NX5 476 aa19.22■□□□□ 0.67
RNF220-212ENST00000475378 BBC3Q96PG8 261 aaPredicted RBP19.22■□□□□ 0.67
RNF220-212ENST00000475378 ASXL3Q9C0F0 2248 aa19.22■□□□□ 0.67
RNF220-212ENST00000475378 URB1O60287 2271 aaKnown RBP19.22■□□□□ 0.67
RNF220-212ENST00000475378 ARHGAP33O14559 1287 aa19.21■□□□□ 0.67
RNF220-212ENST00000475378 GABRDO14764 452 aa19.21■□□□□ 0.67
RNF220-212ENST00000475378 GJB3O75712 270 aa19.21■□□□□ 0.67
RNF220-212ENST00000475378 OLFM2O95897 454 aa19.21■□□□□ 0.67
RNF220-212ENST00000475378 APODP05090 189 aa19.21■□□□□ 0.67
RNF220-212ENST00000475378 POLR2BP30876 1174 aaKnown RBP19.21■□□□□ 0.67
RNF220-212ENST00000475378 SLC7A9P82251 487 aa19.21■□□□□ 0.67
RNF220-212ENST00000475378 SLFN12LQ6IEE8 588 aa19.21■□□□□ 0.67
RNF220-212ENST00000475378 FAM171BQ6P995 826 aa19.21■□□□□ 0.67
RNF220-212ENST00000475378 RHBDF2Q6PJF5 856 aa19.21■□□□□ 0.67
RNF220-212ENST00000475378 CCNI2Q6ZMN8 369 aaPredicted RBP19.21■□□□□ 0.67
RNF220-212ENST00000475378 C1orf127Q8N9H9 656 aa19.21■□□□□ 0.67
RNF220-212ENST00000475378 SPATA17Q96L03 361 aa19.21■□□□□ 0.67
RNF220-212ENST00000475378 IKZF4Q9H2S9 585 aa19.21■□□□□ 0.67
RNF220-212ENST00000475378 LIMCH1Q9UPQ0 1083 aa19.21■□□□□ 0.67
RNF220-212ENST00000475378 AGAP1Q9UPQ3 857 aa19.21■□□□□ 0.67
RNF220-212ENST00000475378 ASH1LQ9NR48 2969 aaKnown RBP19.21■□□□□ 0.67
RNF220-212ENST00000475378 VWA3AA6NCI4 1184 aa19.2■□□□□ 0.66
RNF220-212ENST00000475378 HUS1O60921 280 aa19.2■□□□□ 0.66
RNF220-212ENST00000475378 IL18RAPO95256 599 aa19.2■□□□□ 0.66
RNF220-212ENST00000475378 ADSSP30520 456 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms