RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 SLBPQ14493 270 aaKnown RBP eCLIP6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 MLC1Q15049 377 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 UBE3CQ15386 1083 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 CYTH1Q15438 398 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 NTRK3Q16288 839 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 HSP90AA5PQ58FG0 334 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 PRAMEF13Q5VWM6 474 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 METTL2BQ6P1Q9 378 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 SLC4A10Q6U841 1118 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 C8orf86Q6ZUL3 223 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 CATSPER4Q7RTX7 472 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 CLVS1Q8IUQ0 354 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 CD302Q8IX05 232 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 IFT20Q8IY31 132 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 ZBED8Q8IZ13 594 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 LZTR1Q8N653 840 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 SHCBP1Q8NEM2 672 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 SLC22A8Q8TCC7 542 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 PI4K2BQ8TCG2 481 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 NAT14Q8WUY8 206 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 SECISBP2Q96T21 854 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 HEPHQ9BQS7 1158 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 IMPG2Q9BZV3 1241 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 IFT22Q9H7X7 185 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 CYP4F11Q9HBI6 524 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 LGR6Q9HBX8 967 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 PLCB1Q9NQ66 1216 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 PANK4Q9NVE7 773 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 ETNK2Q9NVF9 386 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 SIRT5Q9NXA8 310 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 CRIM1Q9NZV1 1036 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 EPS15L1Q9UBC2 864 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 USP21Q9UK80 565 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 FAF1Q9UNN5 650 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 SNX5Q9Y5X3 404 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 DIP2AQ14689 1571 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 PVALEFA0A1B0GWK0 134 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 TCRBV16S1A1N1A0A5B0 115 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 E2F8A0AVK6 867 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 SH3PXD2BA1X283 911 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 CTAGE9A4FU28 777 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 GOLGA8JA6NMD2 632 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 KIAA1324LA8MWY0 1029 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 PFDN6O15212 129 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 NCAM2O15394 837 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 FIBPO43427 364 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 DAB1O75553 588 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 TCEA3O75764 348 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 KCNH1O95259 989 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 ENO2P09104 434 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 PAEPP09466 180 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 KRT10P13645 584 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 BPIP17213 487 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 VCLP18206 1134 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 NR1D1P20393 614 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 CASP14P31944 242 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 HNF1BP35680 557 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 MTHFRP42898 656 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 GSSP48637 474 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 CDK7P50613 346 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 ARFIP2P53365 341 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 EXOSC9Q06265 439 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 CKAP4Q07065 602 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 GOLGA8FQ08AF8 430 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 GOLGA8DPQ0D2H9 430 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 MTX1Q13505 466 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 COL9A3Q14050 684 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 STILQ15468 1287 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 IGSF11Q5DX21 431 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 HYIQ5T013 277 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 FAM102BQ5T8I3 360 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 BTBD8Q5XKL5 378 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 ANO1Q5XXA6 986 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 LRRC8BQ6P9F7 803 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 ANGPTL8Q6UXH0 198 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 KSR2Q6VAB6 950 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 RFPL4BQ6ZWI9 263 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 RAPH1Q70E73 1250 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 FASTKD5Q7L8L6 764 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 TCEAL8Q8IYN2 117 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 C7orf61Q8IZ16 206 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 ST13P4Q8IZP2 240 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 FAM9CQ8IZT9 166 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 HCAR2Q8TDS4 363 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 XAGE3Q8WTP9 111 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 RCC1LQ96I51 464 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 METTL2AQ96IZ6 378 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 CHAMP1Q96JM3 812 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 TNIP3Q96KP6 325 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 MAGEB10Q96LZ2 347 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 FANCD2OSQ96PS1 177 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 CTRCQ99895 268 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 SELENOOQ9BVL4 669 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 RNPEPL1Q9HAU8 725 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 GP6Q9HCN6 339 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 CRTAC1Q9NQ79 661 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 GIN1Q9NXP7 522 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 SAMD15Q9P1V8 674 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 TNFRSF10DQ9UBN6 386 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms