RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 AVENQ9NQS1 362 aaPredicted RBP16.68■□□□□ 0.26
COL1A1-204ENST00000474644 CYP26A1O43174 497 aa16.67■□□□□ 0.26
COL1A1-204ENST00000474644 CSH1P0DML2 217 aa16.67■□□□□ 0.26
COL1A1-204ENST00000474644 CSH2P0DML3 217 aa16.67■□□□□ 0.26
COL1A1-204ENST00000474644 FSHRP23945 695 aa16.67■□□□□ 0.26
COL1A1-204ENST00000474644 GNA15P30679 374 aa16.67■□□□□ 0.26
COL1A1-204ENST00000474644 CCR2P41597 374 aa16.67■□□□□ 0.26
COL1A1-204ENST00000474644 JAM2P57087 298 aa16.67■□□□□ 0.26
COL1A1-204ENST00000474644 TAF12Q16514 161 aa16.67■□□□□ 0.26
COL1A1-204ENST00000474644 PRSS36Q5K4E3 855 aa16.67■□□□□ 0.26
COL1A1-204ENST00000474644 LCLAT1Q6UWP7 414 aa16.67■□□□□ 0.26
COL1A1-204ENST00000474644 PDZD4Q76G19 769 aaPredicted RBP16.67■□□□□ 0.26
COL1A1-204ENST00000474644 ANKRD52Q8NB46 1076 aa16.67■□□□□ 0.26
COL1A1-204ENST00000474644 LEMD2Q8NC56 503 aa16.67■□□□□ 0.26
COL1A1-204ENST00000474644 TRMT2BQ96GJ1 504 aaKnown RBP16.67■□□□□ 0.26
COL1A1-204ENST00000474644 PHF7Q9BWX1 381 aaPredicted RBP16.67■□□□□ 0.26
COL1A1-204ENST00000474644 DUSP16Q9BY84 665 aa16.67■□□□□ 0.26
COL1A1-204ENST00000474644 HESX1Q9UBX0 185 aa16.67■□□□□ 0.26
COL1A1-204ENST00000474644 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.67■□□□□ 0.26
COL1A1-204ENST00000474644 NRG2O14511 850 aaPredicted RBP16.66■□□□□ 0.26
COL1A1-204ENST00000474644 TPM3P06753 285 aa16.66■□□□□ 0.26
COL1A1-204ENST00000474644 MYL4P12829 197 aa16.66■□□□□ 0.26
COL1A1-204ENST00000474644 BMP1P13497 986 aa16.66■□□□□ 0.26
COL1A1-204ENST00000474644 CLCN1P35523 988 aa16.66■□□□□ 0.26
COL1A1-204ENST00000474644 SLC5A3P53794 718 aa16.66■□□□□ 0.26
COL1A1-204ENST00000474644 BCAT1P54687 386 aa16.66■□□□□ 0.26
COL1A1-204ENST00000474644 USP46P62068 366 aa16.66■□□□□ 0.26
COL1A1-204ENST00000474644 STILQ15468 1287 aa16.66■□□□□ 0.26
COL1A1-204ENST00000474644 CNGA2Q16280 664 aa16.66■□□□□ 0.26
COL1A1-204ENST00000474644 CYP4A22Q5TCH4 519 aa16.66■□□□□ 0.26
COL1A1-204ENST00000474644 DENND5BQ6ZUT9 1274 aa16.66■□□□□ 0.26
COL1A1-204ENST00000474644 GET4Q7L5D6 327 aaPredicted RBP16.66■□□□□ 0.26
COL1A1-204ENST00000474644 ITFG1Q8TB96 612 aa16.66■□□□□ 0.26
COL1A1-204ENST00000474644 TCEAL4Q96EI5 215 aa16.66■□□□□ 0.26
COL1A1-204ENST00000474644 MYRFLQ96LU7 910 aa16.66■□□□□ 0.26
COL1A1-204ENST00000474644 SPAG5Q96R06 1193 aa16.66■□□□□ 0.26
COL1A1-204ENST00000474644 IL21Q9HBE4 155 aa16.66■□□□□ 0.26
COL1A1-204ENST00000474644 MAGED2Q9UNF1 606 aaPredicted RBP16.66■□□□□ 0.26
COL1A1-204ENST00000474644 MRPS23Q9Y3D9 190 aaKnown RBP16.66■□□□□ 0.26
COL1A1-204ENST00000474644 HHLA1C9JL84 531 aa16.65■□□□□ 0.26
COL1A1-204ENST00000474644 M0QYV0 167 aa16.65■□□□□ 0.26
COL1A1-204ENST00000474644 TNFRSF10BO14763 440 aa16.65■□□□□ 0.26
COL1A1-204ENST00000474644 THAP12O43422 761 aa16.65■□□□□ 0.26
COL1A1-204ENST00000474644 CBFA2T2O43439 604 aa16.65■□□□□ 0.26
COL1A1-204ENST00000474644 MOSPD3O75425 235 aa16.65■□□□□ 0.26
COL1A1-204ENST00000474644 MICAL2O94851 1124 aa16.65■□□□□ 0.26
COL1A1-204ENST00000474644 CEBPBP17676 345 aa16.65■□□□□ 0.26
COL1A1-204ENST00000474644 SP100P23497 879 aaPredicted RBP16.65■□□□□ 0.26
COL1A1-204ENST00000474644 SSTR3P32745 418 aaPredicted RBP16.65■□□□□ 0.26
COL1A1-204ENST00000474644 PDE4CQ08493 712 aa16.65■□□□□ 0.26
COL1A1-204ENST00000474644 BST2Q10589 180 aaKnown RBP16.65■□□□□ 0.26
COL1A1-204ENST00000474644 PKDCCQ504Y2 493 aa16.65■□□□□ 0.26
COL1A1-204ENST00000474644 TJAP1Q5JTD0 557 aa16.65■□□□□ 0.26
COL1A1-204ENST00000474644 GPRIN1Q7Z2K8 1008 aa16.65■□□□□ 0.26
COL1A1-204ENST00000474644 SLC47A2Q86VL8 602 aa16.65■□□□□ 0.26
COL1A1-204ENST00000474644 SHKBP1Q8TBC3 707 aa16.65■□□□□ 0.26
COL1A1-204ENST00000474644 ING5Q8WYH8 240 aa16.65■□□□□ 0.26
COL1A1-204ENST00000474644 TTLL2Q9BWV7 592 aa16.65■□□□□ 0.26
COL1A1-204ENST00000474644 TTYH3Q9C0H2 523 aa16.65■□□□□ 0.26
COL1A1-204ENST00000474644 PNPLA8Q9NP80 782 aa16.65■□□□□ 0.26
COL1A1-204ENST00000474644 PATJQ8NI35 1801 aa16.65■□□□□ 0.26
COL1A1-204ENST00000474644 A0A1W2PRU2 124 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 TULP2O00295 520 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 ZNF197O14709 1029 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 AP5Z1O43299 807 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 MED7O43513 233 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 TADA3O75528 432 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 GFPT2O94808 682 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 FGF19O95750 216 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 SETSIPP0DME0 302 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 GABRR2P28476 465 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 SOX5P35711 763 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 STAT1P42224 750 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 SLC8A3P57103 927 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 PTK2Q05397 1052 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 ZP2Q05996 745 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 IFRD2Q12894 506 aaPredicted RBP16.64■□□□□ 0.25
COL1A1-204ENST00000474644 MEA1Q16626 185 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 SARM1Q6SZW1 724 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 GAREM2Q75VX8 874 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 CACNA2D4Q7Z3S7 1137 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 TMEM150AQ86TG1 271 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 PIGZQ86VD9 579 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 GPIHBP1Q8IV16 184 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 ADHFE1Q8IWW8 467 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 NPAS3Q8IXF0 933 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 NUP93Q8N1F7 819 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 UBA3Q8TBC4 463 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 ZNF606Q8WXB4 792 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 BAP1Q92560 729 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 SECISBP2LQ93073 1101 aaKnown RBP16.64■□□□□ 0.25
COL1A1-204ENST00000474644 RPGRIP1Q96KN7 1286 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 MYADMQ96S97 322 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 EHD2Q9NZN4 543 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 UXTQ9UBK9 157 aaPredicted RBP16.64■□□□□ 0.25
COL1A1-204ENST00000474644 PRKAG3Q9UGI9 489 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 USTQ9Y2C2 406 aa16.64■□□□□ 0.25
COL1A1-204ENST00000474644 C2CD4DB7Z1M9 353 aa16.63■□□□□ 0.25
COL1A1-204ENST00000474644 XPO1O14980 1071 aaKnown RBP16.63■□□□□ 0.25
COL1A1-204ENST00000474644 RTN3O95197 1032 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms