RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 PHACTR2O75167 634 aa19.79■□□□□ 0.76
COL7A1-209ENST00000474432 ZNF202O95125 648 aa19.79■□□□□ 0.76
COL7A1-209ENST00000474432 NOP14P78316 857 aaKnown RBP19.79■□□□□ 0.76
COL7A1-209ENST00000474432 FAM160A1Q05DH4 1040 aa19.79■□□□□ 0.76
COL7A1-209ENST00000474432 USP4Q13107 963 aa19.79■□□□□ 0.76
COL7A1-209ENST00000474432 BIRC3Q13489 604 aa19.79■□□□□ 0.76
COL7A1-209ENST00000474432 NFIL3Q16649 462 aa19.79■□□□□ 0.76
COL7A1-209ENST00000474432 ZNF699Q32M78 642 aa19.79■□□□□ 0.76
COL7A1-209ENST00000474432 DENND5BQ6ZUT9 1274 aa19.79■□□□□ 0.76
COL7A1-209ENST00000474432 SV2AQ7L0J3 742 aa19.79■□□□□ 0.76
COL7A1-209ENST00000474432 SPEM1Q8N4L4 309 aa19.79■□□□□ 0.76
COL7A1-209ENST00000474432 DCLK2Q8N568 766 aa19.79■□□□□ 0.76
COL7A1-209ENST00000474432 B3GALNT2Q8NCR0 500 aa19.79■□□□□ 0.76
COL7A1-209ENST00000474432 FBRSL1Q9HCM7 1045 aaKnown RBP19.79■□□□□ 0.76
COL7A1-209ENST00000474432 TRPC7Q9HCX4 862 aa19.79■□□□□ 0.76
COL7A1-209ENST00000474432 MAPK8IP1Q9UQF2 711 aa19.79■□□□□ 0.76
COL7A1-209ENST00000474432 ATG2BQ96BY7 2078 aa19.79■□□□□ 0.76
COL7A1-209ENST00000474432 DCHS1Q96JQ0 3298 aa19.78■□□□□ 0.76
COL7A1-209ENST00000474432 TRAV19A0A0A6YYK7 116 aa19.78■□□□□ 0.76
COL7A1-209ENST00000474432 K7ESF4 209 aa19.78■□□□□ 0.76
COL7A1-209ENST00000474432 AKAP3O75969 853 aa19.78■□□□□ 0.76
COL7A1-209ENST00000474432 USP17L7P0C7H9 530 aa19.78■□□□□ 0.76
COL7A1-209ENST00000474432 TCF3P15923 654 aa19.78■□□□□ 0.76
COL7A1-209ENST00000474432 CCR3P51677 355 aa19.78■□□□□ 0.76
COL7A1-209ENST00000474432 MCCD1P59942 119 aaPredicted RBP19.78■□□□□ 0.76
COL7A1-209ENST00000474432 DMWDQ09019 674 aa19.78■□□□□ 0.76
COL7A1-209ENST00000474432 KCNB1Q14721 858 aa19.78■□□□□ 0.76
COL7A1-209ENST00000474432 MTF1Q14872 753 aa19.78■□□□□ 0.76
COL7A1-209ENST00000474432 ZCWPW2Q504Y3 356 aa19.78■□□□□ 0.76
COL7A1-209ENST00000474432 ZNF667Q5HYK9 610 aa19.78■□□□□ 0.76
COL7A1-209ENST00000474432 DGKKQ5KSL6 1271 aa19.78■□□□□ 0.76
COL7A1-209ENST00000474432 NAIF1Q69YI7 327 aaPredicted RBP19.78■□□□□ 0.76
COL7A1-209ENST00000474432 FSTL4Q6MZW2 842 aa19.78■□□□□ 0.76
COL7A1-209ENST00000474432 FAM126AQ9BYI3 521 aaPredicted RBP19.78■□□□□ 0.76
COL7A1-209ENST00000474432 EPC1Q9H2F5 836 aa19.78■□□□□ 0.76
COL7A1-209ENST00000474432 ATP6V1DQ9Y5K8 247 aa19.78■□□□□ 0.76
COL7A1-209ENST00000474432 ZNF840PA6NDX5 716 aa19.77■□□□□ 0.76
COL7A1-209ENST00000474432 IKBKBO14920 756 aa19.77■□□□□ 0.76
COL7A1-209ENST00000474432 TRIM66O15016 1216 aa19.77■□□□□ 0.76
COL7A1-209ENST00000474432 MAPK13O15264 365 aa19.77■□□□□ 0.76
COL7A1-209ENST00000474432 PAPSS2O95340 614 aaPredicted RBP19.77■□□□□ 0.76
COL7A1-209ENST00000474432 CKMP06732 381 aa19.77■□□□□ 0.76
COL7A1-209ENST00000474432 CXCL12P48061 93 aa19.77■□□□□ 0.76
COL7A1-209ENST00000474432 LRRC32Q14392 662 aa19.77■□□□□ 0.76
COL7A1-209ENST00000474432 TMEM196Q5HYL7 178 aa19.77■□□□□ 0.76
COL7A1-209ENST00000474432 CEP135Q66GS9 1140 aa19.77■□□□□ 0.76
COL7A1-209ENST00000474432 PKN3Q6P5Z2 889 aa19.77■□□□□ 0.76
COL7A1-209ENST00000474432 GUF1Q8N442 669 aaKnown RBP19.77■□□□□ 0.76
COL7A1-209ENST00000474432 ATRIPQ8WXE1 791 aa19.77■□□□□ 0.76
COL7A1-209ENST00000474432 ELOVL4Q9GZR5 314 aa19.77■□□□□ 0.76
COL7A1-209ENST00000474432 RNF38Q9H0F5 515 aa19.77■□□□□ 0.76
COL7A1-209ENST00000474432 ARHGAP26Q9UNA1 814 aa19.77■□□□□ 0.76
COL7A1-209ENST00000474432 CEP250Q9BV73 2442 aa19.77■□□□□ 0.76
COL7A1-209ENST00000474432 MYO16Q9Y6X6 1858 aa19.76■□□□□ 0.75
COL7A1-209ENST00000474432 TRDMT1O14717 391 aaKnown RBP19.76■□□□□ 0.75
COL7A1-209ENST00000474432 CALUO43852 315 aaPredicted RBP19.76■□□□□ 0.75
COL7A1-209ENST00000474432 OLFM2O95897 454 aa19.76■□□□□ 0.75
COL7A1-209ENST00000474432 ASS1P00966 412 aaKnown RBP19.76■□□□□ 0.75
COL7A1-209ENST00000474432 HDCP19113 662 aa19.76■□□□□ 0.75
COL7A1-209ENST00000474432 ANXA13P27216 316 aa19.76■□□□□ 0.75
COL7A1-209ENST00000474432 PPP3CAQ08209 521 aa19.76■□□□□ 0.75
COL7A1-209ENST00000474432 PDGFRLQ15198 375 aa19.76■□□□□ 0.75
COL7A1-209ENST00000474432 EML3Q32P44 896 aa19.76■□□□□ 0.75
COL7A1-209ENST00000474432 SPOPLQ6IQ16 392 aa19.76■□□□□ 0.75
COL7A1-209ENST00000474432 SCARA5Q6ZMJ2 495 aa19.76■□□□□ 0.75
COL7A1-209ENST00000474432 FMR1NBQ8N0W7 255 aaPredicted RBP19.76■□□□□ 0.75
COL7A1-209ENST00000474432 SH3RF2Q8TEC5 729 aa19.76■□□□□ 0.75
COL7A1-209ENST00000474432 OSCP1Q8WVF1 389 aa19.76■□□□□ 0.75
COL7A1-209ENST00000474432 RUBCNQ92622 972 aa19.76■□□□□ 0.75
COL7A1-209ENST00000474432 KCNK16Q96T55 309 aa19.76■□□□□ 0.75
COL7A1-209ENST00000474432 HMGXB4Q9UGU5 601 aa19.76■□□□□ 0.75
COL7A1-209ENST00000474432 WNT6Q9Y6F9 365 aa19.76■□□□□ 0.75
COL7A1-209ENST00000474432 DMXL1Q9Y485 3027 aa19.76■□□□□ 0.75
COL7A1-209ENST00000474432 KIAA1549LQ6ZVL6 1849 aa19.75■□□□□ 0.75
COL7A1-209ENST00000474432 TNFRSF10BO14763 440 aa19.75■□□□□ 0.75
COL7A1-209ENST00000474432 HLA-DRAP01903 254 aa19.75■□□□□ 0.75
COL7A1-209ENST00000474432 NR2F2P24468 414 aa19.75■□□□□ 0.75
COL7A1-209ENST00000474432 GJA4P35212 333 aa19.75■□□□□ 0.75
COL7A1-209ENST00000474432 ASPAP45381 313 aa19.75■□□□□ 0.75
COL7A1-209ENST00000474432 VAMP7P51809 220 aa19.75■□□□□ 0.75
COL7A1-209ENST00000474432 TAF10Q12962 218 aa19.75■□□□□ 0.75
COL7A1-209ENST00000474432 SGSM1Q2NKQ1 1148 aa19.75■□□□□ 0.75
COL7A1-209ENST00000474432 FAM35AQ86V20 835 aa19.75■□□□□ 0.75
COL7A1-209ENST00000474432 FUKQ8N0W3 1084 aa19.75■□□□□ 0.75
COL7A1-209ENST00000474432 SYNPOQ8N3V7 929 aa19.75■□□□□ 0.75
COL7A1-209ENST00000474432 EZH1Q92800 747 aaPredicted RBP19.75■□□□□ 0.75
COL7A1-209ENST00000474432 LINC00597Q9H2U6 94 aa19.75■□□□□ 0.75
COL7A1-209ENST00000474432 ECT2Q9H8V3 914 aa19.75■□□□□ 0.75
COL7A1-209ENST00000474432 IL37Q9NZH6 218 aa19.75■□□□□ 0.75
COL7A1-209ENST00000474432 TRPM5Q9NZQ8 1165 aa19.75■□□□□ 0.75
COL7A1-209ENST00000474432 OAS1P00973 400 aaKnown RBP19.74■□□□□ 0.75
COL7A1-209ENST00000474432 TRIM49P0CI25 452 aa19.74■□□□□ 0.75
COL7A1-209ENST00000474432 TRIM49CP0CI26 452 aa19.74■□□□□ 0.75
COL7A1-209ENST00000474432 PFKLP17858 780 aa19.74■□□□□ 0.75
COL7A1-209ENST00000474432 GALK1P51570 392 aa19.74■□□□□ 0.75
COL7A1-209ENST00000474432 SLC7A9P82251 487 aa19.74■□□□□ 0.75
COL7A1-209ENST00000474432 ORC1Q13415 861 aa19.74■□□□□ 0.75
COL7A1-209ENST00000474432 CC2D1AQ6P1N0 951 aaPredicted RBP19.74■□□□□ 0.75
COL7A1-209ENST00000474432 ACOT1Q86TX2 421 aa19.74■□□□□ 0.75
COL7A1-209ENST00000474432 SMYD4Q8IYR2 804 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms