RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 BMP10O95393 424 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 TNFRSF8P28908 595 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 CIITAP33076 1130 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 PPM1AP35813 382 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 ID4P47928 161 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 HSD17B4P51659 736 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 P2RX3P56373 397 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 PEX3P56589 373 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 GSDMDP57764 484 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 PRAMEP78395 509 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 TBL3Q12788 808 aaKnown RBP3.65□□□□□ -1.82
UBR3-208ENST00000474426 ARHGAP19Q14CB8 494 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 TARBP2Q15633 366 aaKnown RBP3.65□□□□□ -1.82
UBR3-208ENST00000474426 ADIPOQQ15848 244 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 C12orf60Q5U649 245 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 SLFN13Q68D06 897 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 SLC22A25Q6T423 547 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 HDXQ7Z353 690 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 ADGRG6Q86SQ4 1221 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 RNF135Q8IUD6 432 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 SCUBE1Q8IWY4 988 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 ANKRD13CQ8N6S4 541 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 ZNF461Q8TAF7 563 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 ZNF274Q96GC6 653 aaPredicted RBP3.65□□□□□ -1.82
UBR3-208ENST00000474426 REXO5Q96IC2 774 aaKnown RBP3.65□□□□□ -1.82
UBR3-208ENST00000474426 SHDQ96IW2 340 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 NOX5Q96PH1 765 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 GOLPH3LQ9H4A5 285 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 TCF7L1Q9HCS4 588 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 DECR2Q9NUI1 292 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 WHRNQ9P202 907 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 HSFX1Q9UBD0 423 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 LRRC42Q9Y546 428 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 AK5Q9Y6K8 562 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 KANSL1LA0AUZ9 987 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 GSAPA4D1B5 854 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 BLACEA4D250 179 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 PITPNM1O00562 1244 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 MAP3K13O43283 966 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 MAN1A2O60476 641 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 MED24O75448 989 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 RASSF9O75901 435 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 BCAS2O75934 225 aaPredicted RBP3.65□□□□□ -1.82
UBR3-208ENST00000474426 GSTM1P09488 218 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 CLTAP09496 248 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 HMOX2P30519 316 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 RFC2P35250 354 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 RFC1P35251 1148 aaPredicted RBP3.65□□□□□ -1.82
UBR3-208ENST00000474426 DPP6P42658 865 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 SOX9P48436 509 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 CYP4F2P78329 520 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 PPP2R2BQ00005 443 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 CYP4F3Q08477 520 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 KCNC3Q14003 757 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 SKIDA1Q1XH10 827 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 PIK3R6Q5UE93 754 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 BTBD8Q5XKL5 378 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 PLA2G4FQ68DD2 849 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 SLC24A5Q71RS6 500 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 SLFN11Q7Z7L1 901 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 BANPQ8N9N5 519 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 RAD51AP1Q96B01 352 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 ATG4CQ96DT6 458 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 C7orf34Q96L11 122 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 CNOT6LQ96LI5 555 aaKnown RBP3.65□□□□□ -1.82
UBR3-208ENST00000474426 FAM193BQ96PV7 902 aaPredicted RBP3.65□□□□□ -1.82
UBR3-208ENST00000474426 SELENOSQ9BQE4 189 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 MRPL37Q9BZE1 423 aaKnown RBP3.65□□□□□ -1.82
UBR3-208ENST00000474426 DCLK3Q9C098 648 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 SEMA6BQ9H3T3 888 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 OSGEPL1Q9H4B0 414 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 EPS8L2Q9H6S3 715 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 TRPC7Q9HCX4 862 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 DMAP1Q9NPF5 467 aaPredicted RBP3.65□□□□□ -1.82
UBR3-208ENST00000474426 HAUS2Q9NVX0 235 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 C5AR2Q9P296 337 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 CYTH4Q9UIA0 394 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 RCOR1Q9UKL0 485 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 CECR2Q9BXF3 1484 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 PCP4L1A6NKN8 68 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 ZBBXA8MT70 800 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 GPRIN2O60269 458 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 PEX11AO75192 247 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 FSBPO95073 299 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 UBTFL6P0CB48 400 aaPredicted RBP3.65□□□□□ -1.83
UBR3-208ENST00000474426 TPBGLP0DKB5 382 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 SRGAP2BP0DMP2 458 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 CKMT2P17540 419 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 CHRM3P20309 590 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 MC4RP32245 332 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 GBP1P32455 592 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 IFNA8P32881 189 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 GATMP50440 423 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 COPB1P53618 953 aaKnown RBP3.65□□□□□ -1.83
UBR3-208ENST00000474426 ASIC1P78348 528 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 IFIT1BQ5T764 474 aaKnown RBP3.65□□□□□ -1.83
UBR3-208ENST00000474426 ERICH5Q6P6B1 374 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 KLHDC10Q6PID8 442 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 PHC2Q8IXK0 858 aa3.65□□□□□ -1.83
UBR3-208ENST00000474426 FBXL16Q8N461 479 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms