RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 IQCDQ96DY2 449 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 DUSP26Q9BV47 211 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 GLOD4Q9HC38 313 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 TRIM36Q9NQ86 728 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 STARD7Q9NQZ5 370 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 STK32BQ9NY57 414 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 COL20A1Q9P218 1284 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 SLC17A6Q9P2U8 582 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 ZNF212Q9UDV6 495 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 HDAC9Q9UKV0 1011 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 NDRG4Q9ULP0 352 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 PCDHGB6Q9Y5F9 930 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 COX11Q9Y6N1 276 aa3.99□□□□□ -1.77
ECHDC1-213ENST00000474240 WDR27A2RRH5 827 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 CLCA1A8K7I4 914 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 M0R3H8 397 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 PMM2O15305 246 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 TTLL1O95922 423 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 PRKCBP05771 671 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 DLDP09622 509 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 PARP1P09874 1014 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 IDEP14735 1019 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 KCNA3P22001 575 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 ACVR2AP27037 513 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 IL1R2P27930 398 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 CTGFP29279 349 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 PRKAR1BP31321 381 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 ALDH9A1P49189 494 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 CARSP49589 748 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 MTHFSP49914 203 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 AK2P54819 239 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 RPS16P62249 146 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 MYO1EQ12965 1108 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 CCNIQ14094 377 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 BOP1Q14137 746 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 TXNRD1Q16881 649 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 VPS53Q5VIR6 699 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 ANKRD16Q6P6B7 361 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 ZNF551Q7Z340 670 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 KRT73Q86Y46 540 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 CCDC146Q8IYE0 955 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 OSCP1Q8WVF1 389 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 RSPRY1Q96DX4 576 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 PDLIM2Q96JY6 352 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 TNIP3Q96KP6 325 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 SNX22Q96L94 193 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 MRPS18AQ9NVS2 196 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 INSL6Q9Y581 213 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 CDY1Q9Y6F8 540 aa3.98□□□□□ -1.77
ECHDC1-213ENST00000474240 ADGRA2Q96PE1 1338 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 PSMD9O00233 223 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 MT-ND5P03915 603 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 ZFXP17010 805 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 TPH1P17752 444 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 EPHA3P29320 983 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 TM4SF4P48230 202 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 RARRES1P49788 294 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 CPT1AP50416 773 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 CASP5P51878 434 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 FOXI1Q12951 378 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 TBCCQ15814 346 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 FAM153CQ494X1 144 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 PRR16Q569H4 304 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 C3orf38Q5JPI3 329 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 DENND2CQ68D51 928 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 RNF44Q7L0R7 432 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 SESTD1Q86VW0 696 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 FANCBQ8NB91 859 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 OR56A3Q8NH54 315 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 RP9Q8TA86 221 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 BPIFB1Q8TDL5 484 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 BRI3BPQ8WY22 251 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 RAPGEF4Q8WZA2 1011 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 TBC1D5Q92609 795 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 STK31Q9BXU1 1019 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 TRIM5Q9C035 493 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 CXorf36Q9H7Y0 433 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 SERTAD3Q9UJW9 196 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 CAPN11Q9UMQ6 739 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 FAM50BQ9Y247 325 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 ENTPD2Q9Y5L3 495 aa3.97□□□□□ -1.77
ECHDC1-213ENST00000474240 AREL1O15033 823 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 CHRM2P08172 466 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 MYL4P12829 197 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 SLC5A1P13866 664 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 CD19P15391 556 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 NDUFB7P17568 137 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 WT1P19544 449 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 MAPK10P53779 464 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 CACNA2D1P54289 1103 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 BCAT1P54687 386 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 ELLP55199 621 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 TPTEP56180 551 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 ZNF543Q08ER8 600 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 TBC1D25Q3MII6 688 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 CACHD1Q5VU97 1274 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 CATSPERGQ6ZRH7 1159 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 ATP11CQ8NB49 1132 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms