RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 CCNE1P24864 410 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 NBL1P41271 181 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 PPP3CCP48454 512 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 PMS1P54277 932 aaKnown RBP11.89□□□□□ -0.51
CKS1B-206ENST00000474215 LRRC63Q05C16 580 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 STIM1Q13586 685 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 C1orf228Q6PIY5 440 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 PAQR9Q6ZVX9 377 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 ZC3H3Q8IXZ2 948 aaKnown RBP11.89□□□□□ -0.51
CKS1B-206ENST00000474215 CCDC150Q8NCX0 1101 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 MSANTD3Q96H12 275 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 DHTKD1Q96HY7 919 aaPredicted RBP11.89□□□□□ -0.51
CKS1B-206ENST00000474215 SLC22A12Q96S37 553 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 KCNK16Q96T55 309 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 FAM83CQ9BQN1 747 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 MED10Q9BTT4 135 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 MMRN2Q9H8L6 949 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 CYP3A43Q9HB55 503 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 APOBEC3GQ9HC16 384 aaKnown RBP11.89□□□□□ -0.51
CKS1B-206ENST00000474215 TRPC7Q9HCX4 862 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.89□□□□□ -0.51
CKS1B-206ENST00000474215 TMEM30AQ9NV96 361 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 SPATA6Q9NWH7 488 aaPredicted RBP11.89□□□□□ -0.51
CKS1B-206ENST00000474215 GTSE1Q9NYZ3 720 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 GCNT4Q9P109 453 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 MAN1B1Q9UKM7 699 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 NDRG2Q9UN36 371 aaKnown RBP11.89□□□□□ -0.51
CKS1B-206ENST00000474215 COL4A3Q01955 1670 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 ZNF840PA6NDX5 716 aa11.88□□□□□ -0.51
CKS1B-206ENST00000474215 SPECC1L-ADORA2AF8WAN1 911 aa11.88□□□□□ -0.51
CKS1B-206ENST00000474215 SLC16A3O15427 465 aaKnown RBP11.88□□□□□ -0.51
CKS1B-206ENST00000474215 CKMP06732 381 aa11.88□□□□□ -0.51
CKS1B-206ENST00000474215 PFKLP17858 780 aa11.88□□□□□ -0.51
CKS1B-206ENST00000474215 TRIM21P19474 475 aaKnown RBP11.88□□□□□ -0.51
CKS1B-206ENST00000474215 PPP1R2P41236 205 aa11.88□□□□□ -0.51
CKS1B-206ENST00000474215 PDE6CP51160 858 aa11.88□□□□□ -0.51
CKS1B-206ENST00000474215 TNK2Q07912 1038 aa11.88□□□□□ -0.51
CKS1B-206ENST00000474215 INCA1Q0VD86 236 aa11.88□□□□□ -0.51
CKS1B-206ENST00000474215 ORC1Q13415 861 aa11.88□□□□□ -0.51
CKS1B-206ENST00000474215 ITPRIPL2Q3MIP1 535 aa11.88□□□□□ -0.51
CKS1B-206ENST00000474215 CC2D1AQ6P1N0 951 aaPredicted RBP11.88□□□□□ -0.51
CKS1B-206ENST00000474215 FRMD5Q7Z6J6 570 aa11.88□□□□□ -0.51
CKS1B-206ENST00000474215 FAM35AQ86V20 835 aa11.88□□□□□ -0.51
CKS1B-206ENST00000474215 RALGPS2Q86X27 583 aaPredicted RBP11.88□□□□□ -0.51
CKS1B-206ENST00000474215 FUKQ8N0W3 1084 aa11.88□□□□□ -0.51
CKS1B-206ENST00000474215 NUP93Q8N1F7 819 aa11.88□□□□□ -0.51
CKS1B-206ENST00000474215 ARL14EPQ8N8R7 260 aaPredicted RBP11.88□□□□□ -0.51
CKS1B-206ENST00000474215 FBXL13Q8NEE6 735 aa11.88□□□□□ -0.51
CKS1B-206ENST00000474215 TTC8Q8TAM2 541 aa11.88□□□□□ -0.51
CKS1B-206ENST00000474215 SEMA4DQ92854 862 aa11.88□□□□□ -0.51
CKS1B-206ENST00000474215 SMARCD1Q96GM5 515 aa11.88□□□□□ -0.51
CKS1B-206ENST00000474215 FAXDC2Q96IV6 333 aa11.88□□□□□ -0.51
CKS1B-206ENST00000474215 NIF3L1Q9GZT8 377 aa11.88□□□□□ -0.51
CKS1B-206ENST00000474215 LMAN1LQ9HAT1 526 aa11.88□□□□□ -0.51
CKS1B-206ENST00000474215 HMGXB4Q9UGU5 601 aa11.88□□□□□ -0.51
CKS1B-206ENST00000474215 TRIM49BA6NDI0 452 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 TNFRSF10BO14763 440 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 LAMTOR5O43504 91 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 AP1G2O75843 785 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 RTN3O95197 1032 aaPredicted RBP11.87□□□□□ -0.51
CKS1B-206ENST00000474215 SP9P0CG40 484 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 CCDC130P13994 396 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 CD44P16070 742 aaKnown RBP11.87□□□□□ -0.51
CKS1B-206ENST00000474215 BMP6P22004 513 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 YWHAQP27348 245 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 CTHP32929 405 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 SOX9P48436 509 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 MXI1P50539 228 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 TAF10Q12962 218 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 RUNX3Q13761 415 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 MORC3Q14149 939 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 WDR44Q5JSH3 913 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 TCERG1LQ5VWI1 586 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 MAML2Q8IZL2 1156 aaPredicted RBP11.87□□□□□ -0.51
CKS1B-206ENST00000474215 C12orf29Q8N999 325 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 SLC2A14Q8TDB8 520 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 SLITRK1Q96PX8 696 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 NT5C1AQ9BXI3 368 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 DNAI2Q9GZS0 605 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 CSNK1G1Q9HCP0 422 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 DMAP1Q9NPF5 467 aaPredicted RBP11.87□□□□□ -0.51
CKS1B-206ENST00000474215 RAB20Q9NX57 234 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 ARMCX3Q9UH62 379 aaPredicted RBP11.87□□□□□ -0.51
CKS1B-206ENST00000474215 FBXO4Q9UKT5 387 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 PIEZO1Q92508 2521 aa11.87□□□□□ -0.51
CKS1B-206ENST00000474215 PPP1R3GB7ZBB8 358 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 BIN1O00499 593 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 CILPO75339 1184 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 ABL1P00519 1130 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 CHRNB1P11230 501 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 TCF3P15923 654 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 CD58P19256 250 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 UBE2HP62256 183 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 IFRD2Q12894 506 aaPredicted RBP11.86□□□□□ -0.51
CKS1B-206ENST00000474215 MTAPQ13126 283 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 MTF1Q14872 753 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 PDGFRLQ15198 375 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 ZNF528Q3MIS6 628 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 DCAF17Q5H9S7 520 aaPredicted RBP11.86□□□□□ -0.51
CKS1B-206ENST00000474215 TXNDC11Q6PKC3 985 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms