RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 CHP1Q99653 195 aa8.06□□□□□ -1.12
CCDC93-207ENST00000474006 CLSTN3Q9BQT9 956 aa8.06□□□□□ -1.12
CCDC93-207ENST00000474006 ZSWIM1Q9BR11 485 aa8.06□□□□□ -1.12
CCDC93-207ENST00000474006 C11orf84Q9BUA3 381 aaPredicted RBP8.06□□□□□ -1.12
CCDC93-207ENST00000474006 C2orf49Q9BVC5 232 aaPredicted RBP8.06□□□□□ -1.12
CCDC93-207ENST00000474006 DNAI2Q9GZS0 605 aa8.06□□□□□ -1.12
CCDC93-207ENST00000474006 HAUS4Q9H6D7 363 aa8.06□□□□□ -1.12
CCDC93-207ENST00000474006 ZFAND3Q9H8U3 227 aa8.06□□□□□ -1.12
CCDC93-207ENST00000474006 ZNHIT6Q9NWK9 470 aaKnown RBP8.06□□□□□ -1.12
CCDC93-207ENST00000474006 GTF3C4Q9UKN8 822 aa8.06□□□□□ -1.12
CCDC93-207ENST00000474006 CDH9Q9ULB4 789 aa8.06□□□□□ -1.12
CCDC93-207ENST00000474006 LZTS1Q9Y250 596 aa8.06□□□□□ -1.12
CCDC93-207ENST00000474006 BACE2Q9Y5Z0 518 aa8.06□□□□□ -1.12
CCDC93-207ENST00000474006 BZW2Q9Y6E2 419 aaKnown RBP8.06□□□□□ -1.12
CCDC93-207ENST00000474006 DNMT3AQ9Y6K1 912 aaPredicted RBP8.06□□□□□ -1.12
CCDC93-207ENST00000474006 TANC1Q9C0D5 1861 aa8.06□□□□□ -1.12
CCDC93-207ENST00000474006 OR6C75A6NL08 312 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 H3BNC9 293 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 TNFRSF10AO00220 468 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 ADAM12O43184 909 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 SERPING1P05155 500 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 PTMAP06454 111 aaKnown RBP8.05□□□□□ -1.12
CCDC93-207ENST00000474006 OR4Q2P0C623 313 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 CTSAP10619 480 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 VDRP11473 427 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 CD19P15391 556 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 CHRNB2P17787 502 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 RPL17P18621 184 aaKnown RBP8.05□□□□□ -1.12
CCDC93-207ENST00000474006 GNA15P30679 374 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 OR1D2P34982 312 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 PRKCIP41743 596 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 GLUD2P49448 558 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 ARPP19P56211 112 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 PSMC1P62191 440 aaKnown RBP8.05□□□□□ -1.12
CCDC93-207ENST00000474006 UBE3AQ05086 875 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 ZNF211Q13398 564 aaPredicted RBP8.05□□□□□ -1.12
CCDC93-207ENST00000474006 GPM6BQ13491 265 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 CAMK1Q14012 370 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 BMS1Q14692 1282 aaKnown RBP8.05□□□□□ -1.12
CCDC93-207ENST00000474006 CNGA2Q16280 664 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 MEA1Q16626 185 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 TAF3Q5VWG9 929 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 HGSNATQ68CP4 663 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 FAM171BQ6P995 826 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 TRIM67Q6ZTA4 783 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 ZNF571Q7Z3V5 609 aaPredicted RBP8.05□□□□□ -1.12
CCDC93-207ENST00000474006 NOP9Q86U38 636 aaKnown RBP8.05□□□□□ -1.12
CCDC93-207ENST00000474006 GLYCTKQ8IVS8 523 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 LRRC8AQ8IWT6 810 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 GPR65Q8IYL9 337 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 DCP1BQ8IZD4 617 aaKnown RBP8.05□□□□□ -1.12
CCDC93-207ENST00000474006 MRPL43Q8N983 215 aaKnown RBP8.05□□□□□ -1.12
CCDC93-207ENST00000474006 B3GALNT2Q8NCR0 500 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 MYCBPAPQ8TBZ2 947 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 MICAL1Q8TDZ2 1067 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 SLC20A1Q8WUM9 679 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 ZNF606Q8WXB4 792 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 PIK3R5Q8WYR1 880 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 DDX1Q92499 740 aaKnown RBP8.05□□□□□ -1.12
CCDC93-207ENST00000474006 CYFIP2Q96F07 1278 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 ZNF830Q96NB3 372 aaPredicted RBP8.05□□□□□ -1.12
CCDC93-207ENST00000474006 AGPAT1Q99943 283 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 TCF25Q9BQ70 676 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 SYT15Q9BQS2 421 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 HERC2P3Q9BVR0 1158 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 OXCT2Q9BYC2 517 aaPredicted RBP8.05□□□□□ -1.12
CCDC93-207ENST00000474006 B3GNT5Q9BYG0 378 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 ZCWPW1Q9H0M4 648 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 ZBP1Q9H171 429 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 CRTAC1Q9NQ79 661 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 MRPL17Q9NRX2 175 aaKnown RBP8.05□□□□□ -1.12
CCDC93-207ENST00000474006 TMLHEQ9NVH6 421 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 MTRRQ9UBK8 725 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 SSX2IPQ9Y2D8 614 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 COL4A6Q14031 1691 aa8.05□□□□□ -1.12
CCDC93-207ENST00000474006 LTBP2Q14767 1821 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 A0A1W2PPC1 479 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 EPOPA6NHQ4 379 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 RFXAPO00287 272 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 THAP12O43422 761 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 URODP06132 367 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 MMEP08473 750 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 PLEKP08567 350 aaPredicted RBP8.04□□□□□ -1.12
CCDC93-207ENST00000474006 CCDC130P13994 396 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 NPR3P17342 541 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 TNFAIP3P21580 790 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 BRD2P25440 801 aaKnown RBP8.04□□□□□ -1.12
CCDC93-207ENST00000474006 CA8P35219 290 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 EIF4A3P38919 411 aaKnown RBP8.04□□□□□ -1.12
CCDC93-207ENST00000474006 PDE6CP51160 858 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 CDK17Q00537 523 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 TSPY1Q01534 308 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 CDR2Q01850 454 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 CENPCQ03188 943 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 GPR17Q13304 367 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 PTPN14Q15678 1187 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 PSMD5Q16401 504 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 CCDC142Q17RM4 750 aa8.04□□□□□ -1.12
CCDC93-207ENST00000474006 ASTE1Q2TB18 679 aaPredicted RBP8.04□□□□□ -1.12
CCDC93-207ENST00000474006 SLC39A12Q504Y0 691 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms