RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 CAMK4Q16566 473 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 ANKRD40Q6AI12 368 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 ERMP1Q7Z2K6 904 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 FBXL13Q8NEE6 735 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 TAS1R2Q8TE23 839 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 TMEM174Q8WUU8 243 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 FAM3CQ92520 227 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 JAKMIP2Q96AA8 810 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 TRMT2BQ96GJ1 504 aaKnown RBP12.25□□□□□ -0.45
CPNE1-222ENST00000473373 SMARCD1Q96GM5 515 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 DHTKD1Q96HY7 919 aaPredicted RBP12.25□□□□□ -0.45
CPNE1-222ENST00000473373 SPATA17Q96L03 361 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 PKMYT1Q99640 499 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 SLC46A2Q9BY10 475 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 ZNF518BQ9C0D4 1074 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 NIF3L1Q9GZT8 377 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 NACA2Q9H009 215 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 GZF1Q9H116 711 aaPredicted RBP12.25□□□□□ -0.45
CPNE1-222ENST00000473373 KIF9Q9HAQ2 790 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 IL21Q9HBE4 155 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 LTB4R2Q9NPC1 389 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 DMAP1Q9NPF5 467 aaPredicted RBP12.25□□□□□ -0.45
CPNE1-222ENST00000473373 KRT82Q9NSB4 513 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 FAM49BQ9NUQ9 324 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 TDP1Q9NUW8 608 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 OBP2AQ9NY56 170 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 ARMCX3Q9UH62 379 aaPredicted RBP12.25□□□□□ -0.45
CPNE1-222ENST00000473373 COL4A2P08572 1712 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 SLC16A3O15427 465 aaKnown RBP12.24□□□□□ -0.45
CPNE1-222ENST00000473373 LAMTOR5O43504 91 aa12.24□□□□□ -0.45
CPNE1-222ENST00000473373 RTN3O95197 1032 aaPredicted RBP12.24□□□□□ -0.45
CPNE1-222ENST00000473373 PRAMEF12O95522 483 aa12.24□□□□□ -0.45
CPNE1-222ENST00000473373 DMDP11532 3685 aa12.24□□□□□ -0.45
CPNE1-222ENST00000473373 CCDC130P13994 396 aa12.24□□□□□ -0.45
CPNE1-222ENST00000473373 HDCP19113 662 aa12.24□□□□□ -0.45
CPNE1-222ENST00000473373 CCNE1P24864 410 aa12.24□□□□□ -0.45
CPNE1-222ENST00000473373 IFNAR2P48551 515 aa12.24□□□□□ -0.45
CPNE1-222ENST00000473373 CETN1Q12798 172 aa12.24□□□□□ -0.45
CPNE1-222ENST00000473373 TPD52L1Q16890 204 aaPredicted RBP12.24□□□□□ -0.45
CPNE1-222ENST00000473373 ZCWPW2Q504Y3 356 aa12.24□□□□□ -0.45
CPNE1-222ENST00000473373 ZNF394Q53GI3 561 aa12.24□□□□□ -0.45
CPNE1-222ENST00000473373 POTEHQ6S545 545 aa12.24□□□□□ -0.45
CPNE1-222ENST00000473373 LIMS2Q7Z4I7 341 aa12.24□□□□□ -0.45
CPNE1-222ENST00000473373 FAM35AQ86V20 835 aa12.24□□□□□ -0.45
CPNE1-222ENST00000473373 MON1AQ86VX9 555 aa12.24□□□□□ -0.45
CPNE1-222ENST00000473373 NUP93Q8N1F7 819 aa12.24□□□□□ -0.45
CPNE1-222ENST00000473373 NELFBQ8WX92 580 aa12.24□□□□□ -0.45
CPNE1-222ENST00000473373 FBXO32Q969P5 355 aa12.24□□□□□ -0.45
CPNE1-222ENST00000473373 NT5C1AQ9BXI3 368 aa12.24□□□□□ -0.45
CPNE1-222ENST00000473373 B3GNT5Q9BYG0 378 aa12.24□□□□□ -0.45
CPNE1-222ENST00000473373 C8orf33Q9H7E9 229 aaPredicted RBP12.24□□□□□ -0.45
CPNE1-222ENST00000473373 PTPRZ1P23471 2315 aaPredicted RBP12.23□□□□□ -0.45
CPNE1-222ENST00000473373 CACNA1IQ9P0X4 2223 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 MYOFQ9NZM1 2061 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 LRRN2O75325 713 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 FGFR1OPO95684 399 aaKnown RBP12.23□□□□□ -0.45
CPNE1-222ENST00000473373 FAM200BP0CF97 657 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 TARSP26639 723 aaKnown RBP12.23□□□□□ -0.45
CPNE1-222ENST00000473373 YWHAQP27348 245 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 MAGEA9P43362 315 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 PPP3CCP48454 512 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 STX17P56962 302 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 MAP3K7CLP57077 242 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 YWHAEP62258 255 aaKnown RBP12.23□□□□□ -0.45
CPNE1-222ENST00000473373 AMPD2Q01433 879 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 ENPEPQ07075 957 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 PAK1Q13153 545 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 COBLL1Q53SF7 1204 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 C1orf228Q6PIY5 440 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 UNC93AQ86WB7 457 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 ARL14EPQ8N8R7 260 aaPredicted RBP12.23□□□□□ -0.45
CPNE1-222ENST00000473373 SLC2A14Q8TDB8 520 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 EXOC4Q96A65 974 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 MSANTD3Q96H12 275 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 C8orf48Q96LL4 319 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 MYRFLQ96LU7 910 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 CEP295NLQ96MC4 621 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 SDCBP2Q9H190 292 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 CYP3A43Q9HB55 503 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 METTL14Q9HCE5 456 aaKnown RBP12.23□□□□□ -0.45
CPNE1-222ENST00000473373 GKN1Q9NS71 199 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 RAB20Q9NX57 234 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 GTSE1Q9NYZ3 720 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 NME7Q9Y5B8 376 aa12.23□□□□□ -0.45
CPNE1-222ENST00000473373 NCANO14594 1321 aa12.22□□□□□ -0.45
CPNE1-222ENST00000473373 C2orf78A6NCI8 922 aa12.22□□□□□ -0.45
CPNE1-222ENST00000473373 MBL2P11226 248 aaPredicted RBP12.22□□□□□ -0.45
CPNE1-222ENST00000473373 ASPAP45381 313 aa12.22□□□□□ -0.45
CPNE1-222ENST00000473373 SOX9P48436 509 aa12.22□□□□□ -0.45
CPNE1-222ENST00000473373 PMS1P54277 932 aaKnown RBP12.22□□□□□ -0.45
CPNE1-222ENST00000473373 SLC8A3P57103 927 aa12.22□□□□□ -0.45
CPNE1-222ENST00000473373 FCHO2Q0JRZ9 810 aa12.22□□□□□ -0.45
CPNE1-222ENST00000473373 LRMPQ12912 555 aa12.22□□□□□ -0.45
CPNE1-222ENST00000473373 TAF10Q12962 218 aa12.22□□□□□ -0.45
CPNE1-222ENST00000473373 LRRC32Q14392 662 aa12.22□□□□□ -0.45
CPNE1-222ENST00000473373 PPP2R5DQ14738 602 aa12.22□□□□□ -0.45
CPNE1-222ENST00000473373 MTF1Q14872 753 aa12.22□□□□□ -0.45
CPNE1-222ENST00000473373 ITPRIPL2Q3MIP1 535 aa12.22□□□□□ -0.45
CPNE1-222ENST00000473373 C1orf220Q5T0J3 134 aa12.22□□□□□ -0.45
CPNE1-222ENST00000473373 ZC3H14Q6PJT7 736 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms