RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 UBTFL6P0CB48 400 aaPredicted RBP10.59□□□□□ -0.71
APTX-216ENST00000472896 ZFXP17010 805 aaPredicted RBP10.59□□□□□ -0.71
APTX-216ENST00000472896 SLC9A1P19634 815 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 CPT1AP50416 773 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 WDR4P57081 412 aaKnown RBP10.59□□□□□ -0.71
APTX-216ENST00000472896 HPCAP84074 193 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 TFAP4Q01664 338 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 BFSP2Q13515 415 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 EPHA7Q15375 998 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 KYNUQ16719 465 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 CTC1Q2NKJ3 1217 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 UBAP2Q5T6F2 1119 aaKnown RBP10.59□□□□□ -0.71
APTX-216ENST00000472896 C6orf163Q5TEZ5 329 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 FAM91A1Q658Y4 838 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 TTC27Q6P3X3 843 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 DSTYKQ6XUX3 929 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 CLNKQ7Z7G1 428 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 ADGRG6Q86SQ4 1221 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 CCDC25Q86WR0 208 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 TDRPQ86YL5 185 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 VPS52Q8N1B4 723 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 LNX1Q8TBB1 728 aaPredicted RBP10.59□□□□□ -0.71
APTX-216ENST00000472896 DHX38Q92620 1227 aaKnown RBP10.59□□□□□ -0.71
APTX-216ENST00000472896 MCUR1Q96AQ8 359 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 HAUS1Q96CS2 278 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 DNAJC19Q96DA6 116 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 PTCD3Q96EY7 689 aaKnown RBP10.59□□□□□ -0.71
APTX-216ENST00000472896 TTC25Q96NG3 672 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 MTMR9Q96QG7 549 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 PHOX2BQ99453 314 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 MIPEPQ99797 713 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 ZSWIM1Q9BR11 485 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 LRRC19Q9H756 370 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 GPAMQ9HCL2 828 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 TIMMDC1Q9NPL8 285 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 TBCCD1Q9NVR7 557 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 PAIP2BQ9ULR5 123 aaKnown RBP10.59□□□□□ -0.71
APTX-216ENST00000472896 NAALADL1Q9UQQ1 740 aa10.59□□□□□ -0.71
APTX-216ENST00000472896 SLC16A3O15427 465 aaKnown RBP10.58□□□□□ -0.72
APTX-216ENST00000472896 THAP12O43422 761 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 SORBS3O60504 671 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 EXOC3O60645 756 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 NBNO60934 754 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 HAUS5O94927 633 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 ACSL3O95573 720 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 SOX5P35711 763 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 PSMD7P51665 324 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 BPIFB4P59827 614 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 ZNF211Q13398 564 aaPredicted RBP10.58□□□□□ -0.72
APTX-216ENST00000472896 ADRM1Q16186 407 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 TTBK2Q6IQ55 1244 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 GDF6Q6KF10 455 aaPredicted RBP10.58□□□□□ -0.72
APTX-216ENST00000472896 FAM117BQ6P1L5 589 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 RFWD3Q6PCD5 774 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 NET1Q7Z628 596 aaPredicted RBP10.58□□□□□ -0.72
APTX-216ENST00000472896 ADAT2Q7Z6V5 191 aaKnown RBP10.58□□□□□ -0.72
APTX-216ENST00000472896 SRRM1Q8IYB3 904 aaKnown RBP10.58□□□□□ -0.72
APTX-216ENST00000472896 SMYD1Q8NB12 490 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 WDR60Q8WVS4 1066 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 DGCR14Q96DF8 476 aaKnown RBP10.58□□□□□ -0.72
APTX-216ENST00000472896 SNF8Q96H20 258 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 TUBGCP5Q96RT8 1024 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 RAD9AQ99638 391 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 PCDH18Q9HCL0 1135 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 SSU72Q9NP77 194 aaKnown RBP10.58□□□□□ -0.72
APTX-216ENST00000472896 SIX2Q9NPC8 291 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 OSGEPQ9NPF4 335 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 AAASQ9NRG9 546 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 EURLQ9NYK6 297 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 CCPG1Q9ULG6 757 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 TRAF3IP3Q9Y228 551 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.58□□□□□ -0.72
APTX-216ENST00000472896 KDM3AQ9Y4C1 1321 aa10.58□□□□□ -0.72
APTX-216ENST00000472896 A6NJR5 290 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 RASA4BC9J798 803 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 H3BQ06 376 aaPredicted RBP10.57□□□□□ -0.72
APTX-216ENST00000472896 NFIBO00712 420 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 BIRC5O15392 142 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 RASA4O43374 803 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 CALUO43852 315 aaPredicted RBP10.57□□□□□ -0.72
APTX-216ENST00000472896 GJB5O95377 273 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 SERPINB8P50452 374 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 AP2B1P63010 937 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 PHEXP78562 749 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 PTPN11Q06124 597 aaPredicted RBP10.57□□□□□ -0.72
APTX-216ENST00000472896 DNAJC3Q13217 504 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 CYLC2Q14093 348 aaPredicted RBP10.57□□□□□ -0.72
APTX-216ENST00000472896 GRM2Q14416 872 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 CALCRLQ16602 461 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 ZC2HC1CQ53FD0 456 aaPredicted RBP10.57□□□□□ -0.72
APTX-216ENST00000472896 HEATR3Q7Z4Q2 680 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 SLC13A5Q86YT5 568 aaPredicted RBP10.57□□□□□ -0.72
APTX-216ENST00000472896 IFNLR1Q8IU57 520 aaPredicted RBP10.57□□□□□ -0.72
APTX-216ENST00000472896 GRK7Q8WTQ7 553 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 ALG3Q92685 438 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 FNBP1Q96RU3 617 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 C17orf80Q9BSJ5 609 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 IL17RBQ9NRM6 502 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 ANKFY1Q9P2R3 1169 aa10.57□□□□□ -0.72
APTX-216ENST00000472896 HSFX1Q9UBD0 423 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms